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9
.copier-answers.yml
Normal file
9
.copier-answers.yml
Normal file
@@ -0,0 +1,9 @@
|
||||
# Do not edit this file!
|
||||
# It is needed to track the repo template version, and editing may break things.
|
||||
# This file will be overwritten by copier on template updates.
|
||||
|
||||
_commit: v1.0.0
|
||||
_src_path: https://github.com/bec-project/plugin_copier_template.git
|
||||
make_commit: false
|
||||
project_name: debye_bec
|
||||
widget_plugins_input: []
|
||||
3
.git_hooks/post-commit
Normal file
3
.git_hooks/post-commit
Normal file
@@ -0,0 +1,3 @@
|
||||
SCRIPT_DIR=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
|
||||
semantic-release changelog -D version_variable=$SCRIPT_DIR/../../semantic_release/__init__.py:__version__
|
||||
semantic-release version -D version_variable=$SCRIPT_DIR/../../semantic_release/__init__.py:__version__
|
||||
3
.git_hooks/pre-commit
Normal file
3
.git_hooks/pre-commit
Normal file
@@ -0,0 +1,3 @@
|
||||
black --line-length=100 $(git diff --cached --name-only --diff-filter=ACM -- '*.py')
|
||||
isort --line-length=100 --profile=black --multi-line=3 --trailing-comma $(git diff --cached --name-only --diff-filter=ACM -- '*.py')
|
||||
git add $(git diff --cached --name-only --diff-filter=ACM -- '*.py')
|
||||
3
.gitignore
vendored
3
.gitignore
vendored
@@ -8,6 +8,9 @@
|
||||
**/.pytest_cache
|
||||
**/*.egg*
|
||||
|
||||
# recovery_config files
|
||||
recovery_config_*
|
||||
|
||||
# file writer data
|
||||
**.h5
|
||||
|
||||
|
||||
@@ -1,40 +1,7 @@
|
||||
# This file is a template, and might need editing before it works on your project.
|
||||
# Official language image. Look for the different tagged releases at:
|
||||
# https://hub.docker.com/r/library/python/tags/
|
||||
image: $CI_DOCKER_REGISTRY/python:3.10
|
||||
|
||||
#commands to run in the Docker container before starting each job.
|
||||
before_script:
|
||||
- pip install -e .[dev]
|
||||
|
||||
# different stages in the pipeline
|
||||
stages:
|
||||
- Formatter
|
||||
- Test
|
||||
- AdditionalTests
|
||||
- Deploy
|
||||
|
||||
formatter:
|
||||
stage: Formatter
|
||||
script:
|
||||
- pip install black
|
||||
- black --check --diff --color --line-length=100 ./
|
||||
|
||||
pytest:
|
||||
stage: Test
|
||||
script:
|
||||
- pytest -v --random-order ./tests
|
||||
|
||||
tests-3.11:
|
||||
stage: AdditionalTests
|
||||
image: $CI_DOCKER_REGISTRY/python:3.11
|
||||
needs: ["pytest"]
|
||||
script:
|
||||
- pytest -v --random-order ./tests
|
||||
allow_failure: true
|
||||
|
||||
tests-3.12:
|
||||
extends: "tests-3.11"
|
||||
stage: AdditionalTests
|
||||
image: $CI_DOCKER_REGISTRY/python:3.12
|
||||
allow_failure: true
|
||||
include:
|
||||
- file: /templates/plugin-repo-template.yml
|
||||
inputs:
|
||||
name: debye_bec
|
||||
target: debye_bec
|
||||
branch: $CHILD_PIPELINE_BRANCH
|
||||
project: bec/awi_utils
|
||||
|
||||
29
LICENSE
Normal file
29
LICENSE
Normal file
@@ -0,0 +1,29 @@
|
||||
|
||||
BSD 3-Clause License
|
||||
|
||||
Copyright (c) 2025, Paul Scherrer Institute
|
||||
|
||||
Redistribution and use in source and binary forms, with or without
|
||||
modification, are permitted provided that the following conditions are met:
|
||||
|
||||
1. Redistributions of source code must retain the above copyright notice, this
|
||||
list of conditions and the following disclaimer.
|
||||
|
||||
2. Redistributions in binary form must reproduce the above copyright notice,
|
||||
this list of conditions and the following disclaimer in the documentation
|
||||
and/or other materials provided with the distribution.
|
||||
|
||||
3. Neither the name of the copyright holder nor the names of its
|
||||
contributors may be used to endorse or promote products derived from
|
||||
this software without specific prior written permission.
|
||||
|
||||
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
|
||||
AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
|
||||
IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
|
||||
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
|
||||
FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
|
||||
DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
|
||||
SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
|
||||
CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
|
||||
OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
|
||||
OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
|
||||
64
README.md
64
README.md
@@ -1,3 +1,65 @@
|
||||
# Debye BEC
|
||||
|
||||
Debye-specific plugins and configs for BEC
|
||||
Debye-specific plugins and configs for BEC
|
||||
|
||||
## How to
|
||||
|
||||
### Visual studio code
|
||||
To open
|
||||
```
|
||||
ssh x01da-bec-001
|
||||
cd /data/test/x01da-test-bec/bec_deployment
|
||||
code
|
||||
```
|
||||
To run tests directly in vs code terminal
|
||||
```
|
||||
. /data/test/x01da-test-bec/bec_deployment/bec_venv/bin/activate
|
||||
cd /data/test/x01da-test-bec/bec_deployment/debye_bec
|
||||
pytest -vv ./tests
|
||||
```
|
||||
### Git
|
||||
```
|
||||
git pull
|
||||
git push origin feat/add_advanced_scan_modes
|
||||
git status
|
||||
```
|
||||
If git claims to not know the author identity
|
||||
```
|
||||
git config --global user.email "you@example.com"
|
||||
git config --global user.name "gac-x01da"
|
||||
```
|
||||
|
||||
### BEC Server
|
||||
```
|
||||
ssh x01da-bec-001
|
||||
cd /data/test/x01da-test-bec/bec_deployment
|
||||
. /data/test/x01da-test-bec/bec_deployment/bec_venv/bin/activate
|
||||
|
||||
bec-server start
|
||||
bec-server restart
|
||||
bec-server stop
|
||||
bec-server attach
|
||||
```
|
||||
|
||||
To restart individual server modules:
|
||||
- ctrl-c + ctrl-c to stop for example scan server or device server module
|
||||
- restart server module(s)
|
||||
|
||||
### BEC Client
|
||||
```
|
||||
ssh x01da-bec-001
|
||||
cd /data/test/x01da-test-bec/bec_deployment
|
||||
bec
|
||||
```
|
||||
|
||||
#### Useful commands in bec
|
||||
Update Session with specific config:
|
||||
```
|
||||
bec.config.update_session_with_file("debye_bec/debye_bec/device_configs/x01da_test_config.yaml")
|
||||
```
|
||||
|
||||
Define folder and sample name for written files:
|
||||
```
|
||||
bec.system_config.file_directory="test"
|
||||
bec.system_config.file_suffix ="sampleA"
|
||||
```
|
||||
@@ -1 +0,0 @@
|
||||
from .bec_client import *
|
||||
@@ -1 +0,0 @@
|
||||
from .plugins import *
|
||||
@@ -1,245 +0,0 @@
|
||||
from bec_lib.devicemanager import Device
|
||||
from bec_lib.scan_report import ScanReport
|
||||
|
||||
# pylint:disable=undefined-variable
|
||||
# pylint: disable=too-many-arguments
|
||||
|
||||
|
||||
def dscan(
|
||||
motor1: Device, m1_from: float, m1_to: float, steps: int, exp_time: float, **kwargs
|
||||
) -> ScanReport:
|
||||
"""Relative line scan with one device.
|
||||
|
||||
Args:
|
||||
motor1 (Device): Device that should be scanned.
|
||||
m1_from (float): Start position relative to the current position.
|
||||
m1_to (float): End position relative to the current position.
|
||||
steps (int): Number of steps.
|
||||
exp_time (float): Exposure time.
|
||||
|
||||
Returns:
|
||||
ScanReport: Status object.
|
||||
|
||||
Examples:
|
||||
>>> dscan(dev.motor1, -5, 5, 10, 0.1)
|
||||
"""
|
||||
return scans.line_scan(
|
||||
motor1, m1_from, m1_to, steps=steps, exp_time=exp_time, relative=True, **kwargs
|
||||
)
|
||||
|
||||
|
||||
def d2scan(
|
||||
motor1: Device,
|
||||
m1_from: float,
|
||||
m1_to: float,
|
||||
motor2: Device,
|
||||
m2_from: float,
|
||||
m2_to: float,
|
||||
steps: int,
|
||||
exp_time: float,
|
||||
**kwargs
|
||||
) -> ScanReport:
|
||||
"""Relative line scan with two devices.
|
||||
|
||||
Args:
|
||||
motor1 (Device): First device that should be scanned.
|
||||
m1_from (float): Start position of the first device relative to its current position.
|
||||
m1_to (float): End position of the first device relative to its current position.
|
||||
motor2 (Device): Second device that should be scanned.
|
||||
m2_from (float): Start position of the second device relative to its current position.
|
||||
m2_to (float): End position of the second device relative to its current position.
|
||||
steps (int): Number of steps.
|
||||
exp_time (float): Exposure time
|
||||
|
||||
Returns:
|
||||
ScanReport: Status object.
|
||||
|
||||
Examples:
|
||||
>>> d2scan(dev.motor1, -5, 5, dev.motor2, -8, 8, 10, 0.1)
|
||||
"""
|
||||
return scans.line_scan(
|
||||
motor1,
|
||||
m1_from,
|
||||
m1_to,
|
||||
motor2,
|
||||
m2_from,
|
||||
m2_to,
|
||||
steps=steps,
|
||||
exp_time=exp_time,
|
||||
relative=True,
|
||||
**kwargs
|
||||
)
|
||||
|
||||
|
||||
def ascan(motor1, m1_from, m1_to, steps, exp_time, **kwargs):
|
||||
"""Absolute line scan with one device.
|
||||
|
||||
Args:
|
||||
motor1 (Device): Device that should be scanned.
|
||||
m1_from (float): Start position.
|
||||
m1_to (float): End position.
|
||||
steps (int): Number of steps.
|
||||
exp_time (float): Exposure time.
|
||||
|
||||
Returns:
|
||||
ScanReport: Status object.
|
||||
|
||||
Examples:
|
||||
>>> ascan(dev.motor1, -5, 5, 10, 0.1)
|
||||
"""
|
||||
return scans.line_scan(
|
||||
motor1, m1_from, m1_to, steps=steps, exp_time=exp_time, relative=False, **kwargs
|
||||
)
|
||||
|
||||
|
||||
def a2scan(motor1, m1_from, m1_to, motor2, m2_from, m2_to, steps, exp_time, **kwargs):
|
||||
"""Absolute line scan with two devices.
|
||||
|
||||
Args:
|
||||
motor1 (Device): First device that should be scanned.
|
||||
m1_from (float): Start position of the first device.
|
||||
m1_to (float): End position of the first device.
|
||||
motor2 (Device): Second device that should be scanned.
|
||||
m2_from (float): Start position of the second device.
|
||||
m2_to (float): End position of the second device.
|
||||
steps (int): Number of steps.
|
||||
exp_time (float): Exposure time
|
||||
|
||||
Returns:
|
||||
ScanReport: Status object.
|
||||
|
||||
Examples:
|
||||
>>> a2scan(dev.motor1, -5, 5, dev.motor2, -8, 8, 10, 0.1)
|
||||
"""
|
||||
return scans.line_scan(
|
||||
motor1,
|
||||
m1_from,
|
||||
m1_to,
|
||||
motor2,
|
||||
m2_from,
|
||||
m2_to,
|
||||
steps=steps,
|
||||
exp_time=exp_time,
|
||||
relative=False,
|
||||
**kwargs
|
||||
)
|
||||
|
||||
|
||||
def dmesh(motor1, m1_from, m1_to, m1_steps, motor2, m2_from, m2_to, m2_steps, exp_time, **kwargs):
|
||||
"""Relative mesh scan (grid scan) with two devices.
|
||||
|
||||
Args:
|
||||
motor1 (Device): First device that should be scanned.
|
||||
m1_from (float): Start position of the first device relative to its current position.
|
||||
m1_to (float): End position of the first device relative to its current position.
|
||||
m1_steps (int): Number of steps for motor1.
|
||||
motor2 (Device): Second device that should be scanned.
|
||||
m2_from (float): Start position of the second device relative to its current position.
|
||||
m2_to (float): End position of the second device relative to its current position.
|
||||
m2_steps (int): Number of steps for motor2.
|
||||
exp_time (float): Exposure time
|
||||
|
||||
Returns:
|
||||
ScanReport: Status object.
|
||||
|
||||
Examples:
|
||||
>>> dmesh(dev.motor1, -5, 5, 10, dev.motor2, -8, 8, 10, 0.1)
|
||||
"""
|
||||
return scans.grid_scan(
|
||||
motor1,
|
||||
m1_from,
|
||||
m1_to,
|
||||
m1_steps,
|
||||
motor2,
|
||||
m2_from,
|
||||
m2_to,
|
||||
m2_steps,
|
||||
exp_time=exp_time,
|
||||
relative=True,
|
||||
)
|
||||
|
||||
|
||||
def amesh(motor1, m1_from, m1_to, m1_steps, motor2, m2_from, m2_to, m2_steps, exp_time, **kwargs):
|
||||
"""Absolute mesh scan (grid scan) with two devices.
|
||||
|
||||
Args:
|
||||
motor1 (Device): First device that should be scanned.
|
||||
m1_from (float): Start position of the first device.
|
||||
m1_to (float): End position of the first device.
|
||||
m1_steps (int): Number of steps for motor1.
|
||||
motor2 (Device): Second device that should be scanned.
|
||||
m2_from (float): Start position of the second device.
|
||||
m2_to (float): End position of the second device.
|
||||
m2_steps (int): Number of steps for motor2.
|
||||
exp_time (float): Exposure time
|
||||
|
||||
Returns:
|
||||
ScanReport: Status object.
|
||||
|
||||
Examples:
|
||||
>>> amesh(dev.motor1, -5, 5, 10, dev.motor2, -8, 8, 10, 0.1)
|
||||
"""
|
||||
return scans.grid_scan(
|
||||
motor1,
|
||||
m1_from,
|
||||
m1_to,
|
||||
m1_steps,
|
||||
motor2,
|
||||
m2_from,
|
||||
m2_to,
|
||||
m2_steps,
|
||||
exp_time=exp_time,
|
||||
relative=False,
|
||||
)
|
||||
|
||||
|
||||
def umv(*args) -> ScanReport:
|
||||
"""Updated absolute move (i.e. blocking) for one or more devices.
|
||||
|
||||
Returns:
|
||||
ScanReport: Status object.
|
||||
|
||||
Examples:
|
||||
>>> umv(dev.samx, 1)
|
||||
>>> umv(dev.samx, 1, dev.samy, 2)
|
||||
"""
|
||||
return scans.umv(*args, relative=False)
|
||||
|
||||
|
||||
def umvr(*args) -> ScanReport:
|
||||
"""Updated relative move (i.e. blocking) for one or more devices.
|
||||
|
||||
Returns:
|
||||
ScanReport: Status object.
|
||||
|
||||
Examples:
|
||||
>>> umvr(dev.samx, 1)
|
||||
>>> umvr(dev.samx, 1, dev.samy, 2)
|
||||
"""
|
||||
return scans.umv(*args, relative=True)
|
||||
|
||||
|
||||
def mv(*args) -> ScanReport:
|
||||
"""Absolute move for one or more devices.
|
||||
|
||||
Returns:
|
||||
ScanReport: Status object.
|
||||
|
||||
Examples:
|
||||
>>> mv(dev.samx, 1)
|
||||
>>> mv(dev.samx, 1, dev.samy, 2)
|
||||
"""
|
||||
return scans.mv(*args, relative=False)
|
||||
|
||||
|
||||
def mvr(*args) -> ScanReport:
|
||||
"""Relative move for one or more devices.
|
||||
|
||||
Returns:
|
||||
ScanReport: Status object.
|
||||
|
||||
Examples:
|
||||
>>> mvr(dev.samx, 1)
|
||||
>>> mvr(dev.samx, 1, dev.samy, 2)
|
||||
"""
|
||||
return scans.mv(*args, relative=True)
|
||||
@@ -1 +0,0 @@
|
||||
|
||||
@@ -1,46 +0,0 @@
|
||||
"""
|
||||
Post startup script for the BEC client. This script is executed after the
|
||||
IPython shell is started. It is used to load the beamline specific
|
||||
information and to setup the prompts.
|
||||
|
||||
The script is executed in the global namespace of the IPython shell. This
|
||||
means that all variables defined here are available in the shell.
|
||||
|
||||
If needed, bec command-line arguments can be parsed here. For example, to
|
||||
parse the --session argument, add the following lines to the script:
|
||||
|
||||
import argparse
|
||||
parser = argparse.ArgumentParser()
|
||||
parser.add_argument("--session", help="Session name", type=str, default="my_default_session")
|
||||
args = parser.parse_args()
|
||||
|
||||
if args.session == "my_session":
|
||||
print("Loading my_session session")
|
||||
from bec_plugins.bec_client.plugins.my_session import *
|
||||
else:
|
||||
print("Loading default session")
|
||||
from bec_plugins.bec_client.plugins.default_session import *
|
||||
"""
|
||||
|
||||
# pylint: disable=invalid-name, unused-import, import-error, undefined-variable, unused-variable, unused-argument, no-name-in-module
|
||||
import argparse
|
||||
|
||||
from bec_lib import bec_logger
|
||||
|
||||
logger = bec_logger.logger
|
||||
|
||||
logger.info("Using the Debye startup script.")
|
||||
|
||||
parser = argparse.ArgumentParser()
|
||||
parser.add_argument("--session", help="Session name", type=str, default="Debye")
|
||||
args = parser.parse_args()
|
||||
|
||||
# SETUP BEAMLINE INFO
|
||||
from bec_client.plugins.SLS.sls_info import OperatorInfo, SLSInfo
|
||||
|
||||
bec._beamline_mixin._bl_info_register(SLSInfo)
|
||||
bec._beamline_mixin._bl_info_register(OperatorInfo)
|
||||
|
||||
# SETUP PROMPTS
|
||||
bec._ip.prompts.username = "Debye"
|
||||
bec._ip.prompts.status = 1
|
||||
@@ -1,25 +0,0 @@
|
||||
"""
|
||||
Pre-startup script for BEC client. This script is executed before the BEC client
|
||||
is started. It can be used to set up the BEC client configuration. The script is
|
||||
executed in the global namespace of the BEC client. This means that all
|
||||
variables defined here are available in the BEC client.
|
||||
|
||||
To set up the BEC client configuration, use the ServiceConfig class. For example,
|
||||
to set the configuration file path, add the following lines to the script:
|
||||
|
||||
import pathlib
|
||||
from bec_lib import ServiceConfig
|
||||
|
||||
current_path = pathlib.Path(__file__).parent.resolve()
|
||||
CONFIG_PATH = f"{current_path}/<path_to_my_config_file.yaml>"
|
||||
|
||||
config = ServiceConfig(CONFIG_PATH)
|
||||
|
||||
If this startup script defined a ServiceConfig object, the BEC client will use
|
||||
it to configure itself. Otherwise, the BEC client will use the default config.
|
||||
"""
|
||||
|
||||
# example:
|
||||
# current_path = pathlib.Path(__file__).parent.resolve()
|
||||
# CONFIG_PATH = f"{current_path}/../../../bec_config.yaml"
|
||||
# config = ServiceConfig(CONFIG_PATH)
|
||||
1
bin/.gitignore
vendored
Normal file
1
bin/.gitignore
vendored
Normal file
@@ -0,0 +1 @@
|
||||
# Add anything you don't want to check in to git, e.g. very large files
|
||||
0
debye_bec/bec_ipython_client/plugins/__init__.py
Normal file
0
debye_bec/bec_ipython_client/plugins/__init__.py
Normal file
0
debye_bec/bec_ipython_client/startup/__init__.py
Normal file
0
debye_bec/bec_ipython_client/startup/__init__.py
Normal file
36
debye_bec/bec_ipython_client/startup/post_startup.py
Normal file
36
debye_bec/bec_ipython_client/startup/post_startup.py
Normal file
@@ -0,0 +1,36 @@
|
||||
"""
|
||||
Post startup script for the BEC client. This script is executed after the
|
||||
IPython shell is started. It is used to load the beamline specific
|
||||
information and to setup the prompts.
|
||||
|
||||
The script is executed in the global namespace of the IPython shell. This
|
||||
means that all variables defined here are available in the shell.
|
||||
|
||||
While command-line arguments have to be set in the pre-startup script, the
|
||||
post-startup script can be used to load beamline specific information and
|
||||
to setup the prompts.
|
||||
|
||||
from bec_lib.logger import bec_logger
|
||||
|
||||
logger = bec_logger.logger
|
||||
|
||||
# pylint: disable=import-error
|
||||
_args = _main_dict["args"]
|
||||
|
||||
_session_name = "cSAXS"
|
||||
if _args.session.lower() == "lamni":
|
||||
from csaxs_bec.bec_ipython_client.plugins.cSAXS import *
|
||||
from csaxs_bec.bec_ipython_client.plugins.LamNI import *
|
||||
|
||||
_session_name = "LamNI"
|
||||
lamni = LamNI(bec)
|
||||
logger.success("LamNI session loaded.")
|
||||
|
||||
elif _args.session.lower() == "csaxs":
|
||||
print("Loading cSAXS session")
|
||||
from csaxs_bec.bec_ipython_client.plugins.cSAXS import *
|
||||
|
||||
logger.success("cSAXS session loaded.")
|
||||
"""
|
||||
|
||||
# pylint: disable=invalid-name, unused-import, import-error, undefined-variable, unused-variable, unused-argument, no-name-in-module
|
||||
23
debye_bec/bec_ipython_client/startup/pre_startup.py
Normal file
23
debye_bec/bec_ipython_client/startup/pre_startup.py
Normal file
@@ -0,0 +1,23 @@
|
||||
"""
|
||||
Pre-startup script for BEC client. This script is executed before the BEC client
|
||||
is started. It can be used to add additional command line arguments.
|
||||
"""
|
||||
|
||||
from bec_lib.service_config import ServiceConfig
|
||||
|
||||
|
||||
def extend_command_line_args(parser):
|
||||
"""
|
||||
Extend the command line arguments of the BEC client.
|
||||
"""
|
||||
|
||||
# parser.add_argument("--session", help="Session name", type=str, default="cSAXS")
|
||||
|
||||
return parser
|
||||
|
||||
|
||||
def get_config() -> ServiceConfig:
|
||||
"""
|
||||
Create and return the service configuration.
|
||||
"""
|
||||
return ServiceConfig(redis={"host": "x01da-bec-001", "port": 6379})
|
||||
0
debye_bec/bec_widgets/__init__.py
Normal file
0
debye_bec/bec_widgets/__init__.py
Normal file
0
debye_bec/bec_widgets/auto_updates/__init__.py
Normal file
0
debye_bec/bec_widgets/auto_updates/__init__.py
Normal file
0
debye_bec/bec_widgets/widgets/__init__.py
Normal file
0
debye_bec/bec_widgets/widgets/__init__.py
Normal file
0
debye_bec/deployments/__init__.py
Normal file
0
debye_bec/deployments/__init__.py
Normal file
0
debye_bec/deployments/device_server/__init__.py
Normal file
0
debye_bec/deployments/device_server/__init__.py
Normal file
11
debye_bec/deployments/device_server/startup.py
Normal file
11
debye_bec/deployments/device_server/startup.py
Normal file
@@ -0,0 +1,11 @@
|
||||
import os
|
||||
|
||||
|
||||
def setup_epics_ca():
|
||||
# os.environ["EPICS_CA_AUTO_ADDR_LIST"] = "NO"
|
||||
# os.environ["EPICS_CA_ADDR_LIST"] = "129.129.122.255 sls-x12sa-cagw.psi.ch:5836"
|
||||
os.environ["PYTHONIOENCODING"] = "latin1"
|
||||
|
||||
|
||||
def run():
|
||||
setup_epics_ca()
|
||||
0
debye_bec/device_configs/__init__.py
Normal file
0
debye_bec/device_configs/__init__.py
Normal file
875
debye_bec/device_configs/x01da_database.yaml
Normal file
875
debye_bec/device_configs/x01da_database.yaml
Normal file
@@ -0,0 +1,875 @@
|
||||
###################
|
||||
#### FRONT END ####
|
||||
###################
|
||||
|
||||
## Slit Diaphragm -- Physical positioners
|
||||
sldi_trxr:
|
||||
readoutPriority: baseline
|
||||
description: Front-end slit diaphragm X-translation Ring-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-SLDI:TRXR
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sldi_trxw:
|
||||
readoutPriority: baseline
|
||||
description: Front-end slit diaphragm X-translation Wall-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-SLDI:TRXW
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sldi_tryb:
|
||||
readoutPriority: baseline
|
||||
description: Front-end slit diaphragm Y-translation Bottom-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-SLDI:TRYB
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sldi_tryt:
|
||||
readoutPriority: baseline
|
||||
description: Front-end slit diaphragm X-translation Top-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-SLDI:TRYT
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
## Slit Diaphragm -- Virtual positioners
|
||||
|
||||
sldi_centerx:
|
||||
readoutPriority: baseline
|
||||
description: Front-end slit diaphragm X-center
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-SLDI:CENTERX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sldi_gapx:
|
||||
readoutPriority: baseline
|
||||
description: Front-end slit diaphragm X-gap
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-SLDI:GAPX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sldi_centery:
|
||||
readoutPriority: baseline
|
||||
description: Front-end slit diaphragm Y-center
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-SLDI:CENTERY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sldi_gapy:
|
||||
readoutPriority: baseline
|
||||
description: Front-end slit diaphragm Y-gap
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-SLDI:GAPY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
## Collimating Mirror -- Physical Positioners
|
||||
|
||||
cm_trxu:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Mirror X-translation upstream
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:TRXU
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_trxd:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Mirror X-translation downstream
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:TRXD
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_tryu:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Mirror Y-translation upstream
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:TRYU
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_trydr:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Mirror Y-translation downstream ring
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:TRYDR
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_trydw:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Mirror Y-translation downstream wall
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:TRYDW
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_bnd:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Mirror bender
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:BND
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
## Collimating Mirror -- Virtual Positioners
|
||||
|
||||
cm_rotx:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Morror Pitch
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:ROTX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_roty:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Morror Yaw
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:ROTY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_rotz:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Morror Roll
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:ROTZ
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_xctp:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Morror Center Point X
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:XTCP
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_ytcp:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Morror Center Point Y
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:YTCP
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_ztcp:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Morror Center Point Z
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:ZTCP
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_xstripe:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Morror X Stripe
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:XSTRIPE
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
###################
|
||||
###### OPTICS #####
|
||||
###################
|
||||
|
||||
## Bragg Monochromator
|
||||
mo1_bragg:
|
||||
readoutPriority: baseline
|
||||
description: Positioner for the Monochromator
|
||||
deviceClass: debye_bec.devices.mo1_bragg.mo1_bragg.Mo1Bragg
|
||||
deviceConfig:
|
||||
prefix: "X01DA-OP-MO1:BRAGG:"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
## Monochromator -- Physical Positioners
|
||||
|
||||
mo_try:
|
||||
readoutPriority: baseline
|
||||
description: Monochromator Y Translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-MO1:TRY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
mo_trx:
|
||||
readoutPriority: baseline
|
||||
description: Monochromator X Translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-MO1:TRY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
mo_roty:
|
||||
readoutPriority: baseline
|
||||
description: Monochromator Yaw
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-MO1:ROTY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
## Focusing Mirror -- Physical Positioners
|
||||
|
||||
fm_trxu:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Mirror X-translation upstream
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:TRXU
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_trxd:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Mirror X-translation downstream
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:TRXD
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_tryd:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Mirror Y-translation downstream
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:TRYD
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_tryur:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Mirror Y-translation upstream ring
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:TRYUR
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_tryuw:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Mirror Y-translation upstream wall
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:TRYUW
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_bnd:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Mirror bender
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:BND
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
## Focusing Mirror -- Virtual Positioners
|
||||
|
||||
fm_rotx:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Morror Pitch
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:ROTX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_roty:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Morror Yaw
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:ROTY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_rotz:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Morror Roll
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:ROTZ
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_xctp:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Morror Center Point X
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:XTCP
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_ytcp:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Morror Center Point Y
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:YTCP
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_ztcp:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Morror Center Point Z
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:ZTCP
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
# fm_xstripe:
|
||||
# readoutPriority: baseline
|
||||
# description: Focusing Morror X Stripe
|
||||
# deviceClass: ophyd.EpicsMotor
|
||||
# deviceConfig:
|
||||
# prefix: X01DA-OP-FM:XSTRIPE
|
||||
# onFailure: retry
|
||||
# enabled: true
|
||||
# softwareTrigger: false
|
||||
|
||||
## Optics Slits 1 -- Physical positioners
|
||||
|
||||
sl1_trxr:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 1 X-translation Ring-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL1:TRXR
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sl1_trxw:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 1 X-translation Wall-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL1:TRXW
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sl1_tryb:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 1 Y-translation Bottom-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL1:TRYB
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sl1_tryt:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 1 X-translation Top-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL1:TRYT
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
bm1_try:
|
||||
readoutPriority: baseline
|
||||
description: Beam Monitor 1 Y-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-BM1:TRY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
## Optics Slits 1 -- Virtual positioners
|
||||
|
||||
sl1_centerx:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 1 X-center
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL1:CENTERX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sl1_gapx:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 1 X-gap
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL1:GAPX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sl1_centery:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 1 Y-center
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL1:CENTERY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sl1_gapy:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 1 Y-gap
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL1:GAPY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
## Optics Slits 2 -- Physical positioners
|
||||
|
||||
sl2_trxr:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 2 X-translation Ring-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL2:TRXR
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sl2_trxw:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 2 X-translation Wall-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL2:TRXW
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sl2_tryb:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 2 Y-translation Bottom-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL2:TRYB
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sl2_tryt:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 2 X-translation Top-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL2:TRYT
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
bm2_try:
|
||||
readoutPriority: baseline
|
||||
description: Beam Monitor 2 Y-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-BM2:TRY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
## Optics Slits 2 -- Virtual positioners
|
||||
|
||||
sl2_centerx:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 2 X-center
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL2:CENTERX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sl2_gapx:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 2 X-gap
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL2:GAPX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sl2_centery:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 2 Y-center
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL2:CENTERY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sl2_gapy:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 2 Y-gap
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL2:GAPY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
###############################
|
||||
###### EXPERIMENTAL HUTCH #####
|
||||
###############################
|
||||
|
||||
###########################################
|
||||
## Optical Table -- Physical Positioners ##
|
||||
###########################################
|
||||
|
||||
ot_tryu:
|
||||
readoutPriority: baseline
|
||||
description: Optical Table Y-Translation Upstream
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES-OT:TRYU
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
ot_tryd:
|
||||
readoutPriority: baseline
|
||||
description: Optical Table Y-Translation Downstream
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES-OT:TRYD
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
############################################
|
||||
## Optical Table -- Virtual Positioners ###
|
||||
############################################
|
||||
|
||||
ot_try:
|
||||
readoutPriority: baseline
|
||||
description: Optical Table Y-Translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES-OT:TRY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
ot_pitch:
|
||||
readoutPriority: baseline
|
||||
description: Optical Table Pitch
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES-OT:ROTX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
#########################################
|
||||
## Exit Window -- Physical Positioners ##
|
||||
#########################################
|
||||
|
||||
es0wi_try:
|
||||
readoutPriority: baseline
|
||||
description: End Station 0 Exit Window Y-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES0-WI:TRY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
###############################################
|
||||
## End Station Slits -- Physical Positioners ##
|
||||
###############################################
|
||||
|
||||
es0sl_trxr:
|
||||
readoutPriority: baseline
|
||||
description: End Station slits X-translation Ring-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES0-SL:TRXR
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
es0sl_trxw:
|
||||
readoutPriority: baseline
|
||||
description: End Station slits X-translation Wall-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES0-SL:TRXW
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
es0sl_tryb:
|
||||
readoutPriority: baseline
|
||||
description: End Station slits Y-translation Bottom-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES0-SL:TRYB
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
es0sl_tryt:
|
||||
readoutPriority: baseline
|
||||
description: End Station slits X-translation Top-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES0-SL:TRYT
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
##############################################
|
||||
## End Station Slits -- Virtual positioners ##
|
||||
##############################################
|
||||
|
||||
es0sl_center:
|
||||
readoutPriority: baseline
|
||||
description: End Station slits X-center
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES0-SL:CENTERX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
es0sl_gapx:
|
||||
readoutPriority: baseline
|
||||
description: End Station slits X-gap
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES0-SL:GAPX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
es0sl_centery:
|
||||
readoutPriority: baseline
|
||||
description: End Station slits Y-center
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES0-SL:CENTERY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
es0sl_gapy:
|
||||
readoutPriority: baseline
|
||||
description: End Station slits Y-gap
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES0-SL:GAPY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
#########################################################
|
||||
## Pinhole and alignment laser -- Physical Positioners ##
|
||||
#########################################################
|
||||
|
||||
es1pin_try:
|
||||
readoutPriority: baseline
|
||||
description: End Station pinhole and alignment laser Y-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES1-PIN1:TRY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
es1pin_trx:
|
||||
readoutPriority: baseline
|
||||
description: End Station pinhole and alignment laser X-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES1-PIN1:TRX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
es1pin_rotx:
|
||||
readoutPriority: baseline
|
||||
description: End Station pinhole and alignment laser X-rotation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES1-PIN1:ROTX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
es1pin_roty:
|
||||
readoutPriority: baseline
|
||||
description: End Station pinhole and alignment laser Y-rotation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES1-PIN1:ROTY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
|
||||
################################################
|
||||
## Sample Manipulator -- Physical Positioners ##
|
||||
################################################
|
||||
|
||||
es1man_trx:
|
||||
readoutPriority: baseline
|
||||
description: End Station sample manipulator X-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES1-MAN1:TRX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
es1man_try:
|
||||
readoutPriority: baseline
|
||||
description: End Station sample manipulator Y-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES1-MAN1:TRY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
es1man_trz:
|
||||
readoutPriority: baseline
|
||||
description: End Station sample manipulator Z-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES1-MAN1:TRZ
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
es1man_roty:
|
||||
readoutPriority: baseline
|
||||
description: End Station sample manipulator Y-rotation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES1-MAN1:ROTY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
############################################
|
||||
## Segemented Arc -- Physical Positioners ##
|
||||
############################################
|
||||
|
||||
es1arc_roty:
|
||||
readoutPriority: baseline
|
||||
description: End Station segmented arc Y-rotation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES1-ARC:ROTY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
es1det1_trx:
|
||||
readoutPriority: baseline
|
||||
description: End Station SDD 1 X-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES1-DET1:TRX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
es1bm1_trx:
|
||||
readoutPriority: baseline
|
||||
description: End Station X-ray Eye X-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES1-BM1:TRX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
es1det2_trx:
|
||||
readoutPriority: baseline
|
||||
description: End Station SDD 2 X-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES1-DET2:TRX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
#######################################
|
||||
## Beam Stop -- Physical Positioners ##
|
||||
#######################################
|
||||
|
||||
es2bs_trx:
|
||||
readoutPriority: baseline
|
||||
description: End Station beamstop X-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES2-BS:TRX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
es2bs_try:
|
||||
readoutPriority: baseline
|
||||
description: End Station beamstop Y-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES2-BS:TRY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
##############################################
|
||||
## IC12 Manipulator -- Physical Positioners ##
|
||||
##############################################
|
||||
|
||||
es2ma2_try:
|
||||
readoutPriority: baseline
|
||||
description: End Station ionization chamber 1+2 Y-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES2-MA2:TRY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
es2ma2_trz:
|
||||
readoutPriority: baseline
|
||||
description: End Station ionization chamber 1+2 Z-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES2-MA2:TRZ
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
#######################################################
|
||||
## XRD Detector Manipulator -- Physical Positioners ##
|
||||
#######################################################
|
||||
|
||||
es2ma3_try:
|
||||
readoutPriority: baseline
|
||||
description: End Station XRD detector Y-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES2-MA3:TRY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
13
debye_bec/device_configs/x01da_machine.yaml
Normal file
13
debye_bec/device_configs/x01da_machine.yaml
Normal file
@@ -0,0 +1,13 @@
|
||||
curr:
|
||||
readoutPriority: baseline
|
||||
description: SLS ring current
|
||||
deviceClass: ophyd.EpicsSignalRO
|
||||
deviceConfig:
|
||||
auto_monitor: true
|
||||
read_pv: AGEBD-DBPM3CURR:CURRENT-AVG
|
||||
deviceTags:
|
||||
- machine
|
||||
onFailure: buffer
|
||||
enabled: true
|
||||
readOnly: true
|
||||
softwareTrigger: false
|
||||
227
debye_bec/device_configs/x01da_optic_slits.yaml
Normal file
227
debye_bec/device_configs/x01da_optic_slits.yaml
Normal file
@@ -0,0 +1,227 @@
|
||||
## Optics Slits 1 -- Physical positioners
|
||||
|
||||
sl1_trxr:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 1 X-translation Ring-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL1:TRXR
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
sl1_trxw:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 1 X-translation Wall-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL1:TRXW
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
sl1_tryb:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 1 Y-translation Bottom-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL1:TRYB
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
sl1_tryt:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 1 X-translation Top-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL1:TRYT
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
bm1_try:
|
||||
readoutPriority: baseline
|
||||
description: Beam Monitor 1 Y-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-BM1:TRY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
|
||||
## Optics Slits 1 -- Virtual positioners
|
||||
|
||||
sl1_centerx:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 1 X-center
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL1:CENTERX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
sl1_gapx:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 1 X-gap
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL1:GAPX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
sl1_centery:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 1 Y-center
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL1:CENTERY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
sl1_gapy:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 1 Y-gap
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL1:GAPY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
|
||||
## Optics Slits 2 -- Physical positioners
|
||||
|
||||
sl2_trxr:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 2 X-translation Ring-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL2:TRXR
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
sl2_trxw:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 2 X-translation Wall-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL2:TRXW
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
sl2_tryb:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 2 Y-translation Bottom-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL2:TRYB
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
sl2_tryt:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 2 X-translation Top-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL2:TRYT
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
bm2_try:
|
||||
readoutPriority: baseline
|
||||
description: Beam Monitor 2 Y-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-BM2:TRY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
|
||||
## Optics Slits 2 -- Virtual positioners
|
||||
|
||||
sl2_centerx:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 2 X-center
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL2:CENTERX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
sl2_gapx:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 2 X-gap
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL2:GAPX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
sl2_centery:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 2 Y-center
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL2:CENTERY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
sl2_gapy:
|
||||
readoutPriority: baseline
|
||||
description: Optics slits 2 Y-gap
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-SL2:GAPY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
deviceTags:
|
||||
- optics
|
||||
- slits
|
||||
636
debye_bec/device_configs/x01da_test_config.yaml
Normal file
636
debye_bec/device_configs/x01da_test_config.yaml
Normal file
@@ -0,0 +1,636 @@
|
||||
optic_slit_config:
|
||||
- !include ./x01da_optic_slits.yaml
|
||||
machine_config:
|
||||
- !include ./x01da_machine.yaml
|
||||
## Slit Diaphragm -- Physical positioners
|
||||
sldi_trxr:
|
||||
readoutPriority: baseline
|
||||
description: Front-end slit diaphragm X-translation Ring-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-SLDI:TRXR
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sldi_trxw:
|
||||
readoutPriority: baseline
|
||||
description: Front-end slit diaphragm X-translation Wall-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-SLDI:TRXW
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sldi_tryb:
|
||||
readoutPriority: baseline
|
||||
description: Front-end slit diaphragm Y-translation Bottom-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-SLDI:TRYB
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sldi_tryt:
|
||||
readoutPriority: baseline
|
||||
description: Front-end slit diaphragm X-translation Top-edge
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-SLDI:TRYT
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
## Slit Diaphragm -- Virtual positioners
|
||||
|
||||
sldi_centerx:
|
||||
readoutPriority: baseline
|
||||
description: Front-end slit diaphragm X-center
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-SLDI:CENTERX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sldi_gapx:
|
||||
readoutPriority: baseline
|
||||
description: Front-end slit diaphragm X-gap
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-SLDI:GAPX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sldi_centery:
|
||||
readoutPriority: baseline
|
||||
description: Front-end slit diaphragm Y-center
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-SLDI:CENTERY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
sldi_gapy:
|
||||
readoutPriority: baseline
|
||||
description: Front-end slit diaphragm Y-gap
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-SLDI:GAPY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
|
||||
## Collimating Mirror -- Physical Positioners
|
||||
|
||||
cm_trxu:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Mirror X-translation upstream
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:TRXU
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_trxd:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Mirror X-translation downstream
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:TRXD
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_tryu:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Mirror Y-translation upstream
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:TRYU
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_trydr:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Mirror Y-translation downstream ring
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:TRYDR
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_trydw:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Mirror Y-translation downstream wall
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:TRYDW
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_bnd:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Mirror bender
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:BND
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
## Collimating Mirror -- Virtual Positioners
|
||||
|
||||
cm_rotx:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Morror Pitch
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:ROTX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_roty:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Morror Yaw
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:ROTY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_rotz:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Morror Roll
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:ROTZ
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_trx:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Morror Center Point X
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:XTCP
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_try:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Morror Center Point Y
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:YTCP
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_ztcp:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Morror Center Point Z
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:ZTCP
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
cm_xstripe:
|
||||
readoutPriority: baseline
|
||||
description: Collimating Morror X Stripe
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-FE-CM:XSTRIPE
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
## Bragg Monochromator
|
||||
mo1_bragg:
|
||||
readoutPriority: baseline
|
||||
description: Positioner for the Monochromator
|
||||
deviceClass: debye_bec.devices.mo1_bragg.mo1_bragg.Mo1Bragg
|
||||
deviceConfig:
|
||||
prefix: "X01DA-OP-MO1:BRAGG:"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
mo1_bragg_angle:
|
||||
readoutPriority: baseline
|
||||
description: Positioner for the Monochromator
|
||||
deviceClass: debye_bec.devices.mo1_bragg.mo1_bragg_angle.Mo1BraggAngle
|
||||
deviceConfig:
|
||||
prefix: "X01DA-OP-MO1:BRAGG:"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
# NIDAQ
|
||||
nidaq:
|
||||
readoutPriority: monitored
|
||||
description: NIDAQ backend for data reading for debye scans
|
||||
deviceClass: debye_bec.devices.nidaq.nidaq.Nidaq
|
||||
deviceConfig:
|
||||
prefix: "X01DA-PC-SCANSERVER:"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
## Monochromator -- Physical Positioners
|
||||
|
||||
mo_try:
|
||||
readoutPriority: baseline
|
||||
description: Monochromator Y Translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-MO1:TRY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
mo_trx:
|
||||
readoutPriority: baseline
|
||||
description: Monochromator X Translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-MO1:TRX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
mo_roty:
|
||||
readoutPriority: baseline
|
||||
description: Monochromator Yaw
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-MO1:ROTY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
## Focusing Mirror -- Physical Positioners
|
||||
|
||||
fm_trxu:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Mirror X-translation upstream
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:TRXU
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_trxd:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Mirror X-translation downstream
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:TRXD
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_tryd:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Mirror Y-translation downstream
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:TRYD
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_tryur:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Mirror Y-translation upstream ring
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:TRYUR
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_tryuw:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Mirror Y-translation upstream wall
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:TRYUW
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_bnd:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Mirror bender
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:BND
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
## Focusing Mirror -- Virtual Positioners
|
||||
|
||||
fm_rotx:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Morror Pitch
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:ROTX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_roty:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Morror Yaw
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:ROTY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_rotz:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Morror Roll
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:ROTZ
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_xctp:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Morror Center Point X
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:XTCP
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_ytcp:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Morror Center Point Y
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:YTCP
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
fm_ztcp:
|
||||
readoutPriority: baseline
|
||||
description: Focusing Morror Center Point Z
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-OP-FM:ZTCP
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
# Ionization Chambers
|
||||
|
||||
ic0:
|
||||
readoutPriority: baseline
|
||||
description: Ionization chamber 0
|
||||
deviceClass: debye_bec.devices.ionization_chambers.ionization_chamber.IonizationChamber0
|
||||
deviceConfig:
|
||||
prefix: "X01DA-"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
ic1:
|
||||
readoutPriority: baseline
|
||||
description: Ionization chamber 1
|
||||
deviceClass: debye_bec.devices.ionization_chambers.ionization_chamber.IonizationChamber1
|
||||
deviceConfig:
|
||||
prefix: "X01DA-"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
ic2:
|
||||
readoutPriority: baseline
|
||||
description: Ionization chamber 2
|
||||
deviceClass: debye_bec.devices.ionization_chambers.ionization_chamber.IonizationChamber2
|
||||
deviceConfig:
|
||||
prefix: "X01DA-"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
# ES0 Filter
|
||||
|
||||
es0filter:
|
||||
readoutPriority: baseline
|
||||
description: ES0 filter station
|
||||
deviceClass: debye_bec.devices.es0filter.ES0Filter
|
||||
deviceConfig:
|
||||
prefix: "X01DA-ES0-FI:"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
# Reference foil changer
|
||||
|
||||
reffoilchanger:
|
||||
readoutPriority: baseline
|
||||
description: ES2 reference foil changer
|
||||
deviceClass: debye_bec.devices.reffoilchanger.Reffoilchanger
|
||||
deviceConfig:
|
||||
prefix: "X01DA-"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
# Beam Monitors
|
||||
|
||||
# beam_monitor_1:
|
||||
# readoutPriority: async
|
||||
# description: Beam monitor 1
|
||||
# deviceClass: debye_bec.devices.cameras.prosilica_cam.ProsilicaCam
|
||||
# deviceConfig:
|
||||
# prefix: "X01DA-OP-GIGE01:"
|
||||
# onFailure: retry
|
||||
# enabled: true
|
||||
# softwareTrigger: false
|
||||
|
||||
# beam_monitor_2:
|
||||
# readoutPriority: async
|
||||
# description: Beam monitor 2
|
||||
# deviceClass: debye_bec.devices.cameras.prosilica_cam.ProsilicaCam
|
||||
# deviceConfig:
|
||||
# prefix: "X01DA-OP-GIGE02:"
|
||||
# onFailure: retry
|
||||
# enabled: true
|
||||
# softwareTrigger: false
|
||||
|
||||
xray_eye:
|
||||
readoutPriority: async
|
||||
description: X-ray eye
|
||||
deviceClass: debye_bec.devices.cameras.basler_cam.BaslerCam
|
||||
deviceConfig:
|
||||
prefix: "X01DA-ES-XRAYEYE:"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
# Pilatus Curtain
|
||||
# pilatus_curtain:
|
||||
# readoutPriority: baseline
|
||||
# description: Pilatus Curtain
|
||||
# deviceClass: debye_bec.devices.pilatus_curtain.PilatusCurtain
|
||||
# deviceConfig:
|
||||
# prefix: "X01DA-ES2-DET3:TRY-"
|
||||
# onFailure: retry
|
||||
# enabled: true
|
||||
# softwareTrigger: false
|
||||
|
||||
|
||||
################################
|
||||
## ES Hutch Sensors and Light ##
|
||||
################################
|
||||
|
||||
es_temperature1:
|
||||
readoutPriority: baseline
|
||||
description: ES temperature sensor 1
|
||||
deviceClass: ophyd.EpicsSignalRO
|
||||
deviceConfig:
|
||||
read_pv: "X01DA-PC-I2C:_CH1:TEMP"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
es_humidity1:
|
||||
readoutPriority: baseline
|
||||
description: ES humidity sensor 1
|
||||
deviceClass: ophyd.EpicsSignalRO
|
||||
deviceConfig:
|
||||
read_pv: "X01DA-PC-I2C:_CH1:HUMIREL"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
es_pressure1:
|
||||
readoutPriority: baseline
|
||||
description: ES ambient pressure sensor 1
|
||||
deviceClass: ophyd.EpicsSignalRO
|
||||
deviceConfig:
|
||||
read_pv: "X01DA-PC-I2C:_CH1:PRES"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
es_temperature2:
|
||||
readoutPriority: baseline
|
||||
description: ES temperature sensor 2
|
||||
deviceClass: ophyd.EpicsSignalRO
|
||||
deviceConfig:
|
||||
read_pv: "X01DA-PC-I2C:_CH2:TEMP"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
es_humidity2:
|
||||
readoutPriority: baseline
|
||||
description: ES humidity sensor 2
|
||||
deviceClass: ophyd.EpicsSignalRO
|
||||
deviceConfig:
|
||||
read_pv: "X01DA-PC-I2C:_CH2:HUMIREL"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
es_pressure2:
|
||||
readoutPriority: baseline
|
||||
description: ES ambient pressure sensor 2
|
||||
deviceClass: ophyd.EpicsSignalRO
|
||||
deviceConfig:
|
||||
read_pv: "X01DA-PC-I2C:_CH2:PRES"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
es_light_toggle:
|
||||
readoutPriority: baseline
|
||||
description: ES light toggle
|
||||
deviceClass: ophyd.EpicsSignal
|
||||
deviceConfig:
|
||||
read_pv: "X01DA-EH-LIGHT:TOGGLE"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
#################
|
||||
## SDD sensors ##
|
||||
#################
|
||||
|
||||
sdd1_temperature:
|
||||
readoutPriority: baseline
|
||||
description: SDD1 temperature sensor
|
||||
deviceClass: ophyd.EpicsSignalRO
|
||||
deviceConfig:
|
||||
read_pv: "X01DA-ES1-DET1:Temperature"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
sdd1_humidity:
|
||||
readoutPriority: baseline
|
||||
description: SDD1 humidity sensor
|
||||
deviceClass: ophyd.EpicsSignalRO
|
||||
deviceConfig:
|
||||
read_pv: "X01DA-ES1-DET1:Humidity"
|
||||
kind: "config"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
#####################
|
||||
## Alignment Laser ##
|
||||
#####################
|
||||
|
||||
es1_alignment_laser:
|
||||
readoutPriority: baseline
|
||||
description: ES1 alignment laser
|
||||
deviceClass: ophyd.EpicsSignal
|
||||
deviceConfig:
|
||||
read_pv: "X01DA-ES1-LAS:Relay"
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
|
||||
## Pinhole alignment stages -- Physical Positioners
|
||||
|
||||
pin1_trx:
|
||||
readoutPriority: baseline
|
||||
description: Pinhole X-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES1-PIN1:TRX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
tags: Endstation
|
||||
|
||||
pin1_try:
|
||||
readoutPriority: baseline
|
||||
description: Pinhole Y-translation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES1-PIN1:TRY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
tags: Endstation
|
||||
|
||||
pin1_rotx:
|
||||
readoutPriority: baseline
|
||||
description: Pinhole X-rotation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES1-PIN1:ROTX
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
tags: Endstation
|
||||
|
||||
pin1_roty:
|
||||
readoutPriority: baseline
|
||||
description: Pinhole Y-rotation
|
||||
deviceClass: ophyd.EpicsMotor
|
||||
deviceConfig:
|
||||
prefix: X01DA-ES1-PIN1:ROTY
|
||||
onFailure: retry
|
||||
enabled: true
|
||||
softwareTrigger: false
|
||||
tags: Endstation
|
||||
0
debye_bec/devices/__init__.py
Normal file
0
debye_bec/devices/__init__.py
Normal file
0
debye_bec/devices/cameras/__init__.py
Normal file
0
debye_bec/devices/cameras/__init__.py
Normal file
38
debye_bec/devices/cameras/basler_cam.py
Normal file
38
debye_bec/devices/cameras/basler_cam.py
Normal file
@@ -0,0 +1,38 @@
|
||||
"""Basler camera class for Debye BEC."""
|
||||
|
||||
from __future__ import annotations
|
||||
|
||||
from typing import TYPE_CHECKING
|
||||
|
||||
from ophyd import ADBase
|
||||
from ophyd import ADComponent as ADCpt
|
||||
from ophyd_devices.devices.areadetector.cam import AravisDetectorCam
|
||||
from ophyd_devices.devices.areadetector.plugins import ImagePlugin_V35
|
||||
|
||||
from debye_bec.devices.cameras.debye_base_cam import DebyeBaseCamera
|
||||
|
||||
if TYPE_CHECKING: # pragma: no cover
|
||||
from bec_lib.devicemanager import ScanInfo
|
||||
|
||||
|
||||
class BaslerCamBase(ADBase):
|
||||
"""BaslerCam Base class."""
|
||||
|
||||
cam1 = ADCpt(AravisDetectorCam, "cam1:")
|
||||
image1 = ADCpt(ImagePlugin_V35, "image1:")
|
||||
|
||||
|
||||
class BaslerCam(DebyeBaseCamera, BaslerCamBase):
|
||||
"""Basler camera class at Debye. IOC prefix: X01DA-ES-XRAYEYE:"""
|
||||
|
||||
def __init__(self, *, name: str, prefix: str = "", scan_info: ScanInfo | None = None, **kwargs):
|
||||
"""
|
||||
Initialize the Prosilica camera class.
|
||||
|
||||
Args:
|
||||
name (str): Name of the camera.
|
||||
prefix (str): IOC prefix.
|
||||
scan_info (ScanInfo): The scan info to use.
|
||||
"""
|
||||
super().__init__(name=name, prefix=prefix, scan_info=scan_info, **kwargs)
|
||||
self._n_rot90 = -1 # Rotate the image by -90 degrees
|
||||
130
debye_bec/devices/cameras/debye_base_cam.py
Normal file
130
debye_bec/devices/cameras/debye_base_cam.py
Normal file
@@ -0,0 +1,130 @@
|
||||
"""Base class for Camera integration at Debye."""
|
||||
|
||||
from __future__ import annotations
|
||||
|
||||
import threading
|
||||
from typing import TYPE_CHECKING
|
||||
|
||||
import numpy as np
|
||||
from bec_lib.logger import bec_logger
|
||||
from ophyd import DeviceStatus, StatusBase
|
||||
from ophyd_devices.interfaces.base_classes.psi_device_base import PSIDeviceBase
|
||||
from typeguard import typechecked
|
||||
|
||||
if TYPE_CHECKING: # pragma: no cover
|
||||
from bec_lib.devicemanager import ScanInfo
|
||||
from ophyd_devices.devices.areadetector.plugins import ImagePlugin_V35
|
||||
|
||||
|
||||
logger = bec_logger.logger
|
||||
|
||||
|
||||
class DebyeBaseCamera(PSIDeviceBase):
|
||||
"""Base class for Debye cameras."""
|
||||
|
||||
USER_ACCESS = ["live_mode"]
|
||||
|
||||
def __init__(self, *, name: str, prefix: str = "", scan_info: ScanInfo | None = None, **kwargs):
|
||||
super().__init__(name=name, prefix=prefix, scan_info=scan_info, **kwargs)
|
||||
self.image1: "ImagePlugin_V35"
|
||||
self._update_frequency = 1 # Hz
|
||||
self._live_mode = False
|
||||
self._live_mode_event = None
|
||||
self._task_status = None
|
||||
self._n_rot90 = -1
|
||||
|
||||
@property
|
||||
def live_mode(self) -> bool:
|
||||
"""Live mode status."""
|
||||
return self._live_mode
|
||||
|
||||
@typechecked
|
||||
@live_mode.setter
|
||||
def live_mode(self, value: bool) -> None:
|
||||
"""
|
||||
Set the live mode status.
|
||||
|
||||
Args:
|
||||
value (bool): True to enable live mode, False to disable.
|
||||
"""
|
||||
if value == self._live_mode:
|
||||
return
|
||||
self._live_mode = value
|
||||
if value:
|
||||
self._start_live_mode()
|
||||
else:
|
||||
self._stop_live_mode()
|
||||
|
||||
def _start_live_mode(self) -> None:
|
||||
"""Start live mode."""
|
||||
if self._live_mode_event is not None: # Kill task if it exists
|
||||
self._live_mode_event.set()
|
||||
self._live_mode_event = None
|
||||
if self._task_status is not None:
|
||||
self.task_handler.kill_task(task_status=self._task_status)
|
||||
self._task_status = None
|
||||
|
||||
self._live_mode_event = threading.Event()
|
||||
self._task_status = self.task_handler.submit_task(task=self.emit_to_bec)
|
||||
|
||||
def _stop_live_mode(self) -> None:
|
||||
"""Stop live mode."""
|
||||
if self._live_mode_event is not None:
|
||||
self._live_mode_event.set()
|
||||
self._live_mode_event = None
|
||||
|
||||
def emit_to_bec(self):
|
||||
"""Emit the image data to BEC. If _live_mode_event is set, stop the task."""
|
||||
while not self._live_mode_event.wait(1 / self._update_frequency):
|
||||
value = self.image1.array_data.get()
|
||||
if value is None:
|
||||
continue
|
||||
width = self.image1.array_size.width.get()
|
||||
height = self.image1.array_size.height.get()
|
||||
# Geometry correction for the image
|
||||
data = np.rot90(np.reshape(value, (height, width)), k=self._n_rot90, axes=(0, 1))
|
||||
self._run_subs(sub_type=self.SUB_DEVICE_MONITOR_2D, value=data)
|
||||
|
||||
########################################
|
||||
# Beamline Specific Implementations #
|
||||
########################################
|
||||
|
||||
def on_init(self) -> None:
|
||||
"""
|
||||
Called when the device is initialized.
|
||||
|
||||
No signals are connected at this point. If you like to
|
||||
set default values on signals, please use on_connected instead.
|
||||
"""
|
||||
|
||||
def on_connected(self) -> None:
|
||||
"""
|
||||
Called after the device is connected and its signals are connected.
|
||||
Default values for signals should be set here.
|
||||
"""
|
||||
self.live_mode = True
|
||||
|
||||
def on_stage(self) -> DeviceStatus | StatusBase | None:
|
||||
"""
|
||||
Called while staging the device.
|
||||
|
||||
Information about the upcoming scan can be accessed from the scan_info (self.scan_info.msg) object.
|
||||
"""
|
||||
|
||||
def on_unstage(self) -> DeviceStatus | StatusBase | None:
|
||||
"""Called while unstaging the device."""
|
||||
|
||||
def on_pre_scan(self) -> DeviceStatus | StatusBase | None:
|
||||
"""Called right before the scan starts on all devices automatically."""
|
||||
|
||||
def on_trigger(self) -> DeviceStatus | StatusBase | None:
|
||||
"""Called when the device is triggered."""
|
||||
|
||||
def on_complete(self) -> DeviceStatus | StatusBase | None:
|
||||
"""Called to inquire if a device has completed a scans."""
|
||||
|
||||
def on_kickoff(self) -> DeviceStatus | StatusBase | None:
|
||||
"""Called to kickoff a device for a fly scan. Has to be called explicitly."""
|
||||
|
||||
def on_stop(self) -> None:
|
||||
"""Called when the device is stopped."""
|
||||
41
debye_bec/devices/cameras/prosilica_cam.py
Normal file
41
debye_bec/devices/cameras/prosilica_cam.py
Normal file
@@ -0,0 +1,41 @@
|
||||
"""Prosilica camera class for integration of beam_monitor 1/2 cameras."""
|
||||
|
||||
from __future__ import annotations
|
||||
|
||||
from typing import TYPE_CHECKING
|
||||
|
||||
from ophyd import ADBase
|
||||
from ophyd import ADComponent as ADCpt
|
||||
from ophyd_devices.devices.areadetector.cam import ProsilicaDetectorCam
|
||||
from ophyd_devices.devices.areadetector.plugins import ImagePlugin_V35
|
||||
|
||||
from debye_bec.devices.cameras.debye_base_cam import DebyeBaseCamera
|
||||
|
||||
if TYPE_CHECKING: # pragma: no cover
|
||||
from bec_lib.devicemanager import ScanInfo
|
||||
|
||||
|
||||
class ProsilicaCamBase(ADBase):
|
||||
"""Base class for Prosilica cameras."""
|
||||
|
||||
cam1 = ADCpt(ProsilicaDetectorCam, "cam1:")
|
||||
image1 = ADCpt(ImagePlugin_V35, "image1:")
|
||||
|
||||
|
||||
class ProsilicaCam(DebyeBaseCamera, ProsilicaCamBase):
|
||||
"""
|
||||
Prosilica camera class, for integration of beam_monitor 1/2 cameras.
|
||||
Prefixes are: X01DA-OP-GIGE02: and X01DA-OP-GIGE01:
|
||||
"""
|
||||
|
||||
def __init__(self, *, name: str, prefix: str = "", scan_info: ScanInfo | None = None, **kwargs):
|
||||
"""
|
||||
Initialize the Prosilica camera class.
|
||||
|
||||
Args:
|
||||
name (str): Name of the camera.
|
||||
prefix (str): IOC prefix.
|
||||
scan_info (ScanInfo): The scan info to use.
|
||||
"""
|
||||
super().__init__(name=name, prefix=prefix, scan_info=scan_info, **kwargs)
|
||||
self._n_rot90 = -1 # Rotate the image by -90 degrees
|
||||
30
debye_bec/devices/device_list.md
Normal file
30
debye_bec/devices/device_list.md
Normal file
@@ -0,0 +1,30 @@
|
||||
// This file was autogenerated. Do not edit it manually.
|
||||
## Device List
|
||||
### debye_bec
|
||||
| Device | Documentation | Module |
|
||||
| :----- | :------------- | :------ |
|
||||
| BaslerCam | Basler camera class at Debye. IOC prefix: X01DA-ES-XRAYEYE: | [debye_bec.devices.cameras.basler_cam](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/cameras/basler_cam.py) |
|
||||
| BaslerCamBase | BaslerCam Base class. | [debye_bec.devices.cameras.basler_cam](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/cameras/basler_cam.py) |
|
||||
| DebyeBaseCamera | Base class for Debye cameras. | [debye_bec.devices.cameras.debye_base_cam](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/cameras/debye_base_cam.py) |
|
||||
| ES0Filter | Class for the ES0 filter station X01DA-ES0-FI: | [debye_bec.devices.es0filter](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/es0filter.py) |
|
||||
| GasMixSetup | Class for the ES2 Pilatus Curtain | [debye_bec.devices.pilatus_curtain](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/pilatus_curtain.py) |
|
||||
| GasMixSetupControl | GasMixSetup Control for Inonization Chamber 0 | [debye_bec.devices.ionization_chambers.ionization_chamber](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/ionization_chambers/ionization_chamber.py) |
|
||||
| HighVoltageSuppliesControl | HighVoltage Supplies Control for Ionization Chamber 0 | [debye_bec.devices.ionization_chambers.ionization_chamber](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/ionization_chambers/ionization_chamber.py) |
|
||||
| IonizationChamber0 | Ionization Chamber 0, prefix should be 'X01DA-'. | [debye_bec.devices.ionization_chambers.ionization_chamber](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/ionization_chambers/ionization_chamber.py) |
|
||||
| IonizationChamber1 | Ionization Chamber 1, prefix should be 'X01DA-'. | [debye_bec.devices.ionization_chambers.ionization_chamber](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/ionization_chambers/ionization_chamber.py) |
|
||||
| IonizationChamber2 | Ionization Chamber 2, prefix should be 'X01DA-'. | [debye_bec.devices.ionization_chambers.ionization_chamber](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/ionization_chambers/ionization_chamber.py) |
|
||||
| Mo1Bragg | Mo1 Bragg motor for the Debye beamline.<br><br> The prefix to connect to the soft IOC is X01DA-OP-MO1:BRAGG:<br> | [debye_bec.devices.mo1_bragg.mo1_bragg](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/mo1_bragg/mo1_bragg.py) |
|
||||
| Mo1BraggAngle | Positioner implementation with readback angle of the MO1 Bragg positioner. | [debye_bec.devices.mo1_bragg.mo1_bragg_angle](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/mo1_bragg/mo1_bragg_angle.py) |
|
||||
| Mo1BraggCalculator | Mo1 Bragg PVs to convert angle to energy or vice-versa. | [debye_bec.devices.mo1_bragg.mo1_bragg_devices](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/mo1_bragg/mo1_bragg_devices.py) |
|
||||
| Mo1BraggCrystal | Mo1 Bragg PVs to set the crystal parameters | [debye_bec.devices.mo1_bragg.mo1_bragg_devices](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/mo1_bragg/mo1_bragg_devices.py) |
|
||||
| Mo1BraggEncoder | Mo1 Bragg PVs to communicate with the encoder | [debye_bec.devices.mo1_bragg.mo1_bragg_devices](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/mo1_bragg/mo1_bragg_devices.py) |
|
||||
| Mo1BraggPositioner | <br> Positioner implementation with readback energy of the MO1 Bragg positioner.<br><br> The prefix to connect to the soft IOC is X01DA-OP-MO1:BRAGG:<br> This soft IOC connects to the NI motor and its control loop.<br> | [debye_bec.devices.mo1_bragg.mo1_bragg_devices](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/mo1_bragg/mo1_bragg_devices.py) |
|
||||
| Mo1BraggScanControl | Mo1 Bragg PVs to control the scan after setting the parameters. | [debye_bec.devices.mo1_bragg.mo1_bragg_devices](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/mo1_bragg/mo1_bragg_devices.py) |
|
||||
| Mo1BraggScanSettings | Mo1 Bragg PVs to set the scan setttings | [debye_bec.devices.mo1_bragg.mo1_bragg_devices](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/mo1_bragg/mo1_bragg_devices.py) |
|
||||
| Mo1BraggStatus | Mo1 Bragg PVs for status monitoring | [debye_bec.devices.mo1_bragg.mo1_bragg_devices](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/mo1_bragg/mo1_bragg_devices.py) |
|
||||
| Mo1TriggerSettings | Mo1 Trigger settings | [debye_bec.devices.mo1_bragg.mo1_bragg_devices](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/mo1_bragg/mo1_bragg_devices.py) |
|
||||
| Nidaq | NIDAQ ophyd wrapper around the NIDAQ backend currently running at x01da-cons-05<br><br> Args:<br> prefix (str) : Prefix to the NIDAQ soft ioc, currently X01DA-PC-SCANSERVER:<br> name (str) : Name of the device<br> scan_info (ScanInfo) : ScanInfo object passed by BEC's devicemanager.<br> | [debye_bec.devices.nidaq.nidaq](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/nidaq/nidaq.py) |
|
||||
| NidaqControl | Nidaq control class with all PVs | [debye_bec.devices.nidaq.nidaq](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/nidaq/nidaq.py) |
|
||||
| ProsilicaCam | <br> Prosilica camera class, for integration of beam_monitor 1/2 cameras.<br> Prefixes are: X01DA-OP-GIGE02: and X01DA-OP-GIGE01:<br> | [debye_bec.devices.cameras.prosilica_cam](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/cameras/prosilica_cam.py) |
|
||||
| ProsilicaCamBase | Base class for Prosilica cameras. | [debye_bec.devices.cameras.prosilica_cam](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/cameras/prosilica_cam.py) |
|
||||
| Reffoilchanger | Class for the ES2 Reference Foil Changer | [debye_bec.devices.reffoilchanger](https://gitlab.psi.ch/bec/debye_bec/-/blob/main/debye_bec/devices/reffoilchanger.py) |
|
||||
54
debye_bec/devices/es0filter.py
Normal file
54
debye_bec/devices/es0filter.py
Normal file
@@ -0,0 +1,54 @@
|
||||
"""ES0 Filter Station"""
|
||||
|
||||
from typing import Literal
|
||||
|
||||
from ophyd import Component as Cpt
|
||||
from ophyd import Device, EpicsSignal, Kind
|
||||
from ophyd_devices.utils import bec_utils
|
||||
from typeguard import typechecked
|
||||
|
||||
|
||||
class EpicsSignalWithRBVBit(EpicsSignal):
|
||||
|
||||
def __init__(self, prefix, *, bit: int, **kwargs):
|
||||
super().__init__(prefix, **kwargs)
|
||||
self.bit = bit
|
||||
|
||||
@typechecked
|
||||
def put(self, value: Literal[0, 1], **kwargs):
|
||||
bit_value = super().get()
|
||||
# convert to int
|
||||
bit_value = int(bit_value)
|
||||
if value == 1:
|
||||
new_value = bit_value | (1 << self.bit)
|
||||
else:
|
||||
new_value = bit_value & ~(1 << self.bit)
|
||||
super().put(new_value, **kwargs)
|
||||
|
||||
def get(self, **kwargs) -> Literal[0, 1]:
|
||||
bit_value = super().get()
|
||||
# convert to int
|
||||
bit_value = int(bit_value)
|
||||
if (bit_value & (1 << self.bit)) == 0:
|
||||
return 0
|
||||
return 1
|
||||
|
||||
|
||||
class ES0Filter(Device):
|
||||
"""Class for the ES0 filter station X01DA-ES0-FI:"""
|
||||
|
||||
Mo400 = Cpt(EpicsSignalWithRBVBit, suffix="BIO", bit=1, kind="config", doc="Mo400 filter")
|
||||
Mo300 = Cpt(EpicsSignalWithRBVBit, suffix="BIO", bit=2, kind="config", doc="Mo300 filter")
|
||||
Mo200 = Cpt(EpicsSignalWithRBVBit, suffix="BIO", bit=3, kind="config", doc="Mo200 filter")
|
||||
Zn500 = Cpt(EpicsSignalWithRBVBit, suffix="BIO", bit=4, kind="config", doc="Zn500 filter")
|
||||
Zn250 = Cpt(EpicsSignalWithRBVBit, suffix="BIO", bit=5, kind="config", doc="Zn250 filter")
|
||||
Zn125 = Cpt(EpicsSignalWithRBVBit, suffix="BIO", bit=6, kind="config", doc="Zn125 filter")
|
||||
Zn50 = Cpt(EpicsSignalWithRBVBit, suffix="BIO", bit=7, kind="config", doc="Zn50 filter")
|
||||
Zn25 = Cpt(EpicsSignalWithRBVBit, suffix="BIO", bit=8, kind="config", doc="Zn25 filter")
|
||||
Al500 = Cpt(EpicsSignalWithRBVBit, suffix="BIO", bit=9, kind="config", doc="Al500 filter")
|
||||
Al320 = Cpt(EpicsSignalWithRBVBit, suffix="BIO", bit=10, kind="config", doc="Al320 filter")
|
||||
Al200 = Cpt(EpicsSignalWithRBVBit, suffix="BIO", bit=11, kind="config", doc="Al200 filter")
|
||||
Al100 = Cpt(EpicsSignalWithRBVBit, suffix="BIO", bit=12, kind="config", doc="Al100 filter")
|
||||
Al50 = Cpt(EpicsSignalWithRBVBit, suffix="BIO", bit=13, kind="config", doc="Al50 filter")
|
||||
Al20 = Cpt(EpicsSignalWithRBVBit, suffix="BIO", bit=14, kind="config", doc="Al20 filter")
|
||||
Al10 = Cpt(EpicsSignalWithRBVBit, suffix="BIO", bit=15, kind="config", doc="Al10 filter")
|
||||
0
debye_bec/devices/ionization_chambers/__init__.py
Normal file
0
debye_bec/devices/ionization_chambers/__init__.py
Normal file
365
debye_bec/devices/ionization_chambers/ionization_chamber.py
Normal file
365
debye_bec/devices/ionization_chambers/ionization_chamber.py
Normal file
@@ -0,0 +1,365 @@
|
||||
from __future__ import annotations
|
||||
|
||||
from typing import TYPE_CHECKING, Literal
|
||||
|
||||
import numpy as np
|
||||
from ophyd import Component as Cpt
|
||||
from ophyd import Device
|
||||
from ophyd import DynamicDeviceComponent as Dcpt
|
||||
from ophyd import EpicsSignal, EpicsSignalRO, EpicsSignalWithRBV, Kind
|
||||
from ophyd.status import DeviceStatus, SubscriptionStatus
|
||||
from ophyd_devices.interfaces.base_classes.psi_device_base import PSIDeviceBase
|
||||
from typeguard import typechecked
|
||||
|
||||
from debye_bec.devices.ionization_chambers.ionization_chamber_enums import (
|
||||
AmplifierEnable,
|
||||
AmplifierFilter,
|
||||
AmplifierGain,
|
||||
)
|
||||
|
||||
if TYPE_CHECKING: # pragma: no cover
|
||||
from bec_lib.devicemanager import ScanInfo
|
||||
|
||||
|
||||
class EpicsSignalSplit(EpicsSignal):
|
||||
"""Wrapper around EpicsSignal with different read and write pv"""
|
||||
|
||||
def __init__(self, prefix, **kwargs):
|
||||
super().__init__(prefix + "-RB", write_pv=prefix + "Set", **kwargs)
|
||||
|
||||
|
||||
class GasMixSetupControl(Device):
|
||||
"""GasMixSetup Control for Inonization Chamber 0"""
|
||||
|
||||
gas1_req = Cpt(EpicsSignalWithRBV, suffix="Gas1Req", kind="config", doc="Gas 1 requirement")
|
||||
conc1_req = Cpt(
|
||||
EpicsSignalWithRBV, suffix="Conc1Req", kind="config", doc="Concentration 1 requirement"
|
||||
)
|
||||
gas2_req = Cpt(EpicsSignalWithRBV, suffix="Gas2Req", kind="config", doc="Gas 2 requirement")
|
||||
conc2_req = Cpt(
|
||||
EpicsSignalWithRBV, suffix="Conc2Req", kind="config", doc="Concentration 2 requirement"
|
||||
)
|
||||
press_req = Cpt(
|
||||
EpicsSignalWithRBV, suffix="PressReq", kind="config", doc="Pressure requirement"
|
||||
)
|
||||
fill = Cpt(EpicsSignal, suffix="Fill", kind="config", doc="Fill the chamber")
|
||||
status = Cpt(EpicsSignalRO, suffix="Status", kind="config", doc="Status")
|
||||
gas1 = Cpt(EpicsSignalRO, suffix="Gas1", kind="config", doc="Gas 1")
|
||||
conc1 = Cpt(EpicsSignalRO, suffix="Conc1", kind="config", doc="Concentration 1")
|
||||
gas2 = Cpt(EpicsSignalRO, suffix="Gas2", kind="config", doc="Gas 2")
|
||||
conc2 = Cpt(EpicsSignalRO, suffix="Conc2", kind="config", doc="Concentration 2")
|
||||
press = Cpt(EpicsSignalRO, suffix="PressTransm", kind="config", doc="Current Pressure")
|
||||
|
||||
|
||||
class HighVoltageSuppliesControl(Device):
|
||||
"""HighVoltage Supplies Control for Ionization Chamber 0"""
|
||||
|
||||
hv_v = Cpt(EpicsSignalSplit, suffix="HV2-V", kind="config", doc="HV voltage")
|
||||
hv_i = Cpt(EpicsSignalSplit, suffix="HV2-I", kind="config", doc="HV current")
|
||||
grid_v = Cpt(EpicsSignalSplit, suffix="HV1-V", kind="config", doc="Grid voltage")
|
||||
grid_i = Cpt(EpicsSignalSplit, suffix="HV1-I", kind="config", doc="Grid current")
|
||||
|
||||
|
||||
class IonizationChamber0(PSIDeviceBase):
|
||||
"""Ionization Chamber 0, prefix should be 'X01DA-'."""
|
||||
|
||||
USER_ACCESS = ["set_gain", "set_filter", "set_hv", "set_grid", "fill"]
|
||||
|
||||
num = 1
|
||||
amp_signals = {
|
||||
"cOnOff": (
|
||||
EpicsSignal,
|
||||
(f"ES:AMP5004.cOnOff{num}"),
|
||||
{"kind": "config", "doc": f"Enable ch{num} -> IC{num-1}"},
|
||||
),
|
||||
"cGain_ENUM": (
|
||||
EpicsSignalWithRBV,
|
||||
(f"ES:AMP5004:cGain{num}_ENUM"),
|
||||
{"kind": "config", "doc": f"Gain of ch{num} -> IC{num-1}"},
|
||||
),
|
||||
"cFilter_ENUM": (
|
||||
EpicsSignalWithRBV,
|
||||
(f"ES:AMP5004:cFilter{num}_ENUM"),
|
||||
{"kind": "config", "doc": f"Filter of ch{num} -> IC{num-1}"},
|
||||
),
|
||||
}
|
||||
amp = Dcpt(amp_signals)
|
||||
gmes = Cpt(GasMixSetupControl, suffix=f"ES-GMES:IC{num-1}")
|
||||
gmes_status = Cpt(EpicsSignalRO, suffix="ES-GMES:StatusMsg0", kind="config", doc="Status")
|
||||
hv = Cpt(HighVoltageSuppliesControl, suffix=f"ES1-IC{num-1}:")
|
||||
hv_en_signals = {
|
||||
"ext_ena": (
|
||||
EpicsSignalRO,
|
||||
"ES1-IC0:HV-Ext-Ena",
|
||||
{"kind": "config", "doc": "External enable signal of HV"},
|
||||
),
|
||||
"ena": (EpicsSignal, "ES1-IC0:HV-Ena", {"kind": "config", "doc": "Enable signal of HV"}),
|
||||
}
|
||||
hv_en = Dcpt(hv_en_signals)
|
||||
|
||||
def __init__(self, name: str, prefix: str = "", scan_info: ScanInfo | None = None, **kwargs):
|
||||
self.timeout_for_pvwait = 2.5
|
||||
super().__init__(name=name, prefix=prefix, scan_info=scan_info, **kwargs)
|
||||
|
||||
@typechecked
|
||||
def set_gain(self, gain: Literal["1e6", "1e7", "5e7", "1e8", "1e9"] | AmplifierGain) -> None:
|
||||
"""Configure the gain setting of the specified channel
|
||||
|
||||
Args:
|
||||
gain (Literal['1e6', '1e7', '5e7', '1e8', '1e9']) : Desired gain
|
||||
"""
|
||||
|
||||
if self.amp.cOnOff.get() == AmplifierEnable.OFF:
|
||||
self.amp.cOnOff.put(AmplifierEnable.ON)
|
||||
|
||||
# Wait until channel is switched on
|
||||
def _wait_enabled():
|
||||
return self.amp.cOnOff.get() == AmplifierEnable.ON
|
||||
|
||||
if not self.wait_for_condition(
|
||||
_wait_enabled, check_stopped=True, timeout=self.timeout_for_pvwait
|
||||
):
|
||||
raise TimeoutError(
|
||||
f"Enabling channel run into timeout after {self.timeout_for_pvwait} seconds"
|
||||
)
|
||||
|
||||
match gain:
|
||||
case "1e6":
|
||||
self.amp.cGain_ENUM.put(AmplifierGain.G1E6)
|
||||
case "1e7":
|
||||
self.amp.cGain_ENUM.put(AmplifierGain.G1E7)
|
||||
case "5e7":
|
||||
self.amp.cGain_ENUM.put(AmplifierGain.G5E7)
|
||||
case "1e8":
|
||||
self.amp.cGain_ENUM.put(AmplifierGain.G1E8)
|
||||
case "1e9":
|
||||
self.amp.cGain_ENUM.put(AmplifierGain.G1E9)
|
||||
|
||||
def set_filter(
|
||||
self,
|
||||
value: (
|
||||
Literal["1us", "3us", "10us", "30us", "100us", "300us", "1ms", "3ms"] | AmplifierFilter
|
||||
),
|
||||
) -> None:
|
||||
"""Configure the filter setting of the specified channel
|
||||
|
||||
Args:
|
||||
value (Literal['1us', '3us', '10us', '30us', '100us', '300us', '1ms', '3ms']) : Desired filter
|
||||
"""
|
||||
if self.amp.cOnOff.get() == AmplifierEnable.OFF:
|
||||
self.amp.cOnOff.put(AmplifierEnable.ON)
|
||||
|
||||
# Wait until channel is switched on
|
||||
def _wait_enabled():
|
||||
return self.amp.cOnOff.get() == AmplifierEnable.ON
|
||||
|
||||
if not self.wait_for_condition(
|
||||
_wait_enabled, check_stopped=True, timeout=self.timeout_for_pvwait
|
||||
):
|
||||
raise TimeoutError(
|
||||
f"Enabling channel run into timeout after {self.timeout_for_pvwait} seconds"
|
||||
)
|
||||
|
||||
match value:
|
||||
case "1us":
|
||||
self.amp.cFilter_ENUM.put(AmplifierFilter.F1US)
|
||||
case "3us":
|
||||
self.amp.cFilter_ENUM.put(AmplifierFilter.F3US)
|
||||
case "10us":
|
||||
self.amp.cFilter_ENUM.put(AmplifierFilter.F10US)
|
||||
case "30us":
|
||||
self.amp.cFilter_ENUM.put(AmplifierFilter.F30US)
|
||||
case "100us":
|
||||
self.amp.cFilter_ENUM.put(AmplifierFilter.F100US)
|
||||
case "300us":
|
||||
self.amp.cFilter_ENUM.put(AmplifierFilter.F300US)
|
||||
case "1ms":
|
||||
self.amp.cFilter_ENUM.put(AmplifierFilter.F1MS)
|
||||
case "3ms":
|
||||
self.amp.cFilter_ENUM.put(AmplifierFilter.F3MS)
|
||||
|
||||
@typechecked
|
||||
def set_hv(self, hv: float) -> None:
|
||||
"""Configure the high voltage settings , this will
|
||||
enable the high voltage (if external enable is active)!
|
||||
|
||||
Args:
|
||||
hv (float) : Desired voltage for the 'HV' terminal. Voltage has to be between 0...3000
|
||||
"""
|
||||
|
||||
if not (0 <= hv <= 3000):
|
||||
raise ValueError(f"specified HV {hv} not within range [0 .. 3000]")
|
||||
if not np.isclose(np.abs(hv - self.hv.grid_v.get()), 0, atol=3):
|
||||
raise ValueError(f"Grid {self.hv.grid_v.get()} must not be higher than HV {hv}!")
|
||||
|
||||
if not self.hv_en.ena.get() == 1:
|
||||
|
||||
def check_ch_ena(*, old_value, value, **kwargs):
|
||||
return value == 1
|
||||
|
||||
status = SubscriptionStatus(device=self.hv_en.ena, callback=check_ch_ena)
|
||||
self.hv_en.ena.put(1)
|
||||
# Wait after setting ena to 1
|
||||
status.wait(timeout=2)
|
||||
|
||||
# Set current fixed to 3 mA (max)
|
||||
self.hv.hv_i.put(3)
|
||||
self.hv.hv_v.put(hv)
|
||||
|
||||
@typechecked
|
||||
def set_grid(self, grid: float) -> None:
|
||||
"""Configure the high voltage settings , this will
|
||||
enable the high voltage (if external enable is active)!
|
||||
|
||||
Args:
|
||||
grid (float) : Desired voltage for the 'Grid' terminal, Grid Voltage has to be between 0...3000
|
||||
"""
|
||||
|
||||
if not (0 <= grid <= 3000):
|
||||
raise ValueError(f"specified Grid {grid} not within range [0 .. 3000]")
|
||||
if not np.isclose(np.abs(grid - self.hv.hv_v.get()), 0, atol=3):
|
||||
raise ValueError(f"Grid {grid} must not be higher than HV {self.hv.hv_v.get()}!")
|
||||
|
||||
if not self.hv_en.ena.get() == 1:
|
||||
|
||||
def check_ch_ena(*, old_value, value, **kwargs):
|
||||
return value == 1
|
||||
|
||||
status = SubscriptionStatus(device=self.hv_en.ena, callback=check_ch_ena)
|
||||
self.hv_en.ena.put(1)
|
||||
# Wait after setting ena to 1
|
||||
status.wait(timeout=2)
|
||||
|
||||
# Set current fixed to 3 mA (max)
|
||||
self.hv.grid_i.put(3)
|
||||
self.hv.grid_v.put(grid)
|
||||
|
||||
@typechecked
|
||||
def fill(
|
||||
self,
|
||||
gas1: Literal["He", "N2", "Ar", "Kr"],
|
||||
conc1: float,
|
||||
gas2: Literal["He", "N2", "Ar", "Kr"],
|
||||
conc2: float,
|
||||
pressure: float,
|
||||
*,
|
||||
wait: bool = False,
|
||||
) -> DeviceStatus:
|
||||
"""Fill an ionization chamber with the specified gas mixture.
|
||||
|
||||
Args:
|
||||
gas1 (Literal['He', 'N2', 'Ar', 'Kr']) : Gas 1 requirement,
|
||||
conc1 (float) : Concentration 1 requirement in %,
|
||||
gas2 (Literal['He', 'N2', 'Ar', 'Kr']) : Gas 2 requirement,
|
||||
conc2 (float) : Concentration 2 requirement in %,
|
||||
pressure (float) : Required pressure in bar abs,
|
||||
wait (bool): If you like to wait for the filling to finish.
|
||||
"""
|
||||
|
||||
if not (0 <= conc1 <= 100):
|
||||
raise ValueError(f"Concentration 1 {conc1} out of range [0 .. 100 %]")
|
||||
if not (0 <= conc2 <= 100):
|
||||
raise ValueError(f"Concentration 2 {conc2} out of range [0 .. 100 %]")
|
||||
if not np.isclose((conc1 + conc2), 100, atol=0.1):
|
||||
raise ValueError(f"Conc1 {conc1} and conc2 {conc2} must sum to 100 +- 0.1")
|
||||
if not (0 <= pressure <= 3):
|
||||
raise ValueError(f"Pressure {pressure} out of range [0 .. 3 bar abs]")
|
||||
|
||||
self.gmes.gas1_req.set(gas1).wait(timeout=3)
|
||||
self.gmes.conc1_req.set(conc1).wait(timeout=3)
|
||||
self.gmes.gas2_req.set(gas2).wait(timeout=3)
|
||||
self.gmes.conc2_req.set(conc2).wait(timeout=3)
|
||||
|
||||
self.gmes.fill.put(1)
|
||||
|
||||
def wait_for_status():
|
||||
return self.gmes.status.get() == 0
|
||||
|
||||
timeout = 3
|
||||
if not self.wait_for_condition(wait_for_status, timeout=timeout, check_stopped=True):
|
||||
raise TimeoutError(
|
||||
f"Ionization chamber filling process did not start after {timeout}s. Last log message {self.gmes_status.get()}"
|
||||
)
|
||||
|
||||
def wait_for_filling_finished():
|
||||
return self.gmes.status.get() == 1
|
||||
|
||||
# Wait until ionization chamber is filled successfully
|
||||
status = self.task_handler.submit_task(
|
||||
task=self.wait_for_condition, task_args=(wait_for_filling_finished, 360, True)
|
||||
)
|
||||
if wait:
|
||||
status.wait()
|
||||
return status
|
||||
|
||||
|
||||
class IonizationChamber1(IonizationChamber0):
|
||||
"""Ionization Chamber 1, prefix should be 'X01DA-'."""
|
||||
|
||||
num = 2
|
||||
amp_signals = {
|
||||
"cOnOff": (
|
||||
EpicsSignal,
|
||||
(f"ES:AMP5004.cOnOff{num}"),
|
||||
{"kind": "config", "doc": f"Enable ch{num} -> IC{num-1}"},
|
||||
),
|
||||
"cGain_ENUM": (
|
||||
EpicsSignalWithRBV,
|
||||
(f"ES:AMP5004:cGain{num}_ENUM"),
|
||||
{"kind": "config", "doc": f"Gain of ch{num} -> IC{num-1}"},
|
||||
),
|
||||
"cFilter_ENUM": (
|
||||
EpicsSignalWithRBV,
|
||||
(f"ES:AMP5004:cFilter{num}_ENUM"),
|
||||
{"kind": "config", "doc": f"Filter of ch{num} -> IC{num-1}"},
|
||||
),
|
||||
}
|
||||
amp = Dcpt(amp_signals)
|
||||
gmes = Cpt(GasMixSetupControl, suffix=f"ES-GMES:IC{num-1}")
|
||||
gmes_status = Cpt(EpicsSignalRO, suffix="ES-GMES:StatusMsg0", kind="config", doc="Status")
|
||||
hv = Cpt(HighVoltageSuppliesControl, suffix=f"ES2-IC{num-1}:")
|
||||
hv_en_signals = {
|
||||
"ext_ena": (
|
||||
EpicsSignalRO,
|
||||
"ES2-IC12:HV-Ext-Ena",
|
||||
{"kind": "config", "doc": "External enable signal of HV"},
|
||||
),
|
||||
"ena": (EpicsSignal, "ES2-IC12:HV-Ena", {"kind": "config", "doc": "Enable signal of HV"}),
|
||||
}
|
||||
hv_en = Dcpt(hv_en_signals)
|
||||
|
||||
|
||||
class IonizationChamber2(IonizationChamber0):
|
||||
"""Ionization Chamber 2, prefix should be 'X01DA-'."""
|
||||
|
||||
num = 3
|
||||
amp_signals = {
|
||||
"cOnOff": (
|
||||
EpicsSignal,
|
||||
(f"ES:AMP5004.cOnOff{num}"),
|
||||
{"kind": "config", "doc": f"Enable ch{num} -> IC{num-1}"},
|
||||
),
|
||||
"cGain_ENUM": (
|
||||
EpicsSignalWithRBV,
|
||||
(f"ES:AMP5004:cGain{num}_ENUM"),
|
||||
{"kind": "config", "doc": f"Gain of ch{num} -> IC{num-1}"},
|
||||
),
|
||||
"cFilter_ENUM": (
|
||||
EpicsSignalWithRBV,
|
||||
(f"ES:AMP5004:cFilter{num}_ENUM"),
|
||||
{"kind": "config", "doc": f"Filter of ch{num} -> IC{num-1}"},
|
||||
),
|
||||
}
|
||||
amp = Dcpt(amp_signals)
|
||||
gmes = Cpt(GasMixSetupControl, suffix=f"ES-GMES:IC{num-1}")
|
||||
gmes_status = Cpt(EpicsSignalRO, suffix="ES-GMES:StatusMsg0", kind="config", doc="Status")
|
||||
hv = Cpt(HighVoltageSuppliesControl, suffix=f"ES2-IC{num-1}:")
|
||||
hv_en_signals = {
|
||||
"ext_ena": (
|
||||
EpicsSignalRO,
|
||||
"ES2-IC12:HV-Ext-Ena",
|
||||
{"kind": "config", "doc": "External enable signal of HV"},
|
||||
),
|
||||
"ena": (EpicsSignal, "ES2-IC12:HV-Ena", {"kind": "config", "doc": "Enable signal of HV"}),
|
||||
}
|
||||
hv_en = Dcpt(hv_en_signals)
|
||||
@@ -0,0 +1,32 @@
|
||||
import enum
|
||||
|
||||
|
||||
class AmplifierEnable(int, enum.Enum):
|
||||
"""Enum class for the enable signal of the channel"""
|
||||
|
||||
OFF = 0
|
||||
STARTUP = 1
|
||||
ON = 2
|
||||
|
||||
|
||||
class AmplifierGain(int, enum.Enum):
|
||||
"""Enum class for the gain of the channel"""
|
||||
|
||||
G1E6 = 0
|
||||
G1E7 = 1
|
||||
G5E7 = 2
|
||||
G1E8 = 3
|
||||
G1E9 = 4
|
||||
|
||||
|
||||
class AmplifierFilter(int, enum.Enum):
|
||||
"""Enum class for the filter of the channel"""
|
||||
|
||||
F1US = 0
|
||||
F3US = 1
|
||||
F10US = 2
|
||||
F30US = 3
|
||||
F100US = 4
|
||||
F300US = 5
|
||||
F1MS = 6
|
||||
F3MS = 7
|
||||
0
debye_bec/devices/mo1_bragg/__init__.py
Normal file
0
debye_bec/devices/mo1_bragg/__init__.py
Normal file
478
debye_bec/devices/mo1_bragg/mo1_bragg.py
Normal file
478
debye_bec/devices/mo1_bragg/mo1_bragg.py
Normal file
@@ -0,0 +1,478 @@
|
||||
"""Module for the Mo1 Bragg positioner of the Debye beamline.
|
||||
The softIOC is reachable via the EPICS prefix X01DA-OP-MO1:BRAGG: and connected
|
||||
to a motor controller via web sockets. The Mo1 Bragg positioner is not only a
|
||||
positioner, but also a scan controller to setup XAS and XRD scans. A few scan modes
|
||||
are programmed in the controller, e.g. simple and advanced XAS scans + XRD triggering mode.
|
||||
|
||||
Note: For some of the Epics PVs, in particular action buttons, the put_complete=True is
|
||||
used to ensure that the action is executed completely. This is believed
|
||||
to allow for a more stable execution of the action."""
|
||||
|
||||
import time
|
||||
from typing import Any, Literal
|
||||
|
||||
from bec_lib.devicemanager import ScanInfo
|
||||
from bec_lib.logger import bec_logger
|
||||
from ophyd import Component as Cpt
|
||||
from ophyd import DeviceStatus, Signal, StatusBase
|
||||
from ophyd.status import SubscriptionStatus
|
||||
from ophyd_devices.interfaces.base_classes.psi_device_base import PSIDeviceBase
|
||||
from ophyd_devices.utils.errors import DeviceStopError
|
||||
from pydantic import BaseModel, Field
|
||||
from typeguard import typechecked
|
||||
|
||||
from debye_bec.devices.mo1_bragg.mo1_bragg_devices import Mo1BraggPositioner
|
||||
|
||||
# pylint: disable=unused-import
|
||||
from debye_bec.devices.mo1_bragg.mo1_bragg_enums import (
|
||||
MoveType,
|
||||
ScanControlLoadMessage,
|
||||
ScanControlMode,
|
||||
ScanControlScanStatus,
|
||||
TriggerControlMode,
|
||||
TriggerControlSource,
|
||||
)
|
||||
from debye_bec.devices.mo1_bragg.mo1_bragg_utils import compute_spline
|
||||
|
||||
# Initialise logger
|
||||
logger = bec_logger.logger
|
||||
|
||||
########### Exceptions ###########
|
||||
|
||||
|
||||
class Mo1BraggError(Exception):
|
||||
"""Exception for the Mo1 Bragg positioner"""
|
||||
|
||||
|
||||
########## Scan Parameter Model ##########
|
||||
|
||||
|
||||
class ScanParameter(BaseModel):
|
||||
"""Dataclass to store the scan parameters for the Mo1 Bragg positioner.
|
||||
This needs to be in sync with the kwargs of the MO1 Bragg scans from Debye, to
|
||||
ensure that the scan parameters are correctly set. Any changes in the scan kwargs,
|
||||
i.e. renaming or adding new parameters, need to be represented here as well."""
|
||||
|
||||
scan_time: float | None = Field(None, description="Scan time for a half oscillation")
|
||||
scan_duration: float | None = Field(None, description="Duration of the scan")
|
||||
xrd_enable_low: bool | None = Field(
|
||||
None, description="XRD enabled for low, should be PV trig_ena_lo_enum"
|
||||
) # trig_enable_low: bool = None
|
||||
xrd_enable_high: bool | None = Field(
|
||||
None, description="XRD enabled for high, should be PV trig_ena_hi_enum"
|
||||
) # trig_enable_high: bool = None
|
||||
exp_time_low: float | None = Field(None, description="Exposure time low energy/angle")
|
||||
exp_time_high: float | None = Field(None, description="Exposure time high energy/angle")
|
||||
cycle_low: int | None = Field(None, description="Cycle for low energy/angle")
|
||||
cycle_high: int | None = Field(None, description="Cycle for high energy/angle")
|
||||
start: float | None = Field(None, description="Start value for energy/angle")
|
||||
stop: float | None = Field(None, description="Stop value for energy/angle")
|
||||
p_kink: float | None = Field(None, description="P Kink")
|
||||
e_kink: float | None = Field(None, description="Energy Kink")
|
||||
model_config: dict = {"validate_assignment": True}
|
||||
|
||||
|
||||
########### Mo1 Bragg Motor Class ###########
|
||||
|
||||
|
||||
class Mo1Bragg(PSIDeviceBase, Mo1BraggPositioner):
|
||||
"""Mo1 Bragg motor for the Debye beamline.
|
||||
|
||||
The prefix to connect to the soft IOC is X01DA-OP-MO1:BRAGG:
|
||||
"""
|
||||
|
||||
USER_ACCESS = ["set_advanced_xas_settings", "set_xtal"]
|
||||
|
||||
def __init__(self, name: str, prefix: str = "", scan_info: ScanInfo | None = None, **kwargs): # type: ignore
|
||||
"""
|
||||
Initialize the PSI Device Base class.
|
||||
|
||||
Args:
|
||||
name (str) : Name of the device
|
||||
scan_info (ScanInfo): The scan info to use.
|
||||
"""
|
||||
super().__init__(name=name, scan_info=scan_info, prefix=prefix, **kwargs)
|
||||
self.scan_parameter = ScanParameter()
|
||||
self.timeout_for_pvwait = 2.5
|
||||
|
||||
########################################
|
||||
# Beamline Specific Implementations #
|
||||
########################################
|
||||
|
||||
def on_init(self) -> None:
|
||||
"""
|
||||
Called when the device is initialized.
|
||||
|
||||
No signals are connected at this point. If you like to
|
||||
set default values on signals, please use on_connected instead.
|
||||
"""
|
||||
|
||||
def on_connected(self) -> None:
|
||||
"""
|
||||
Called after the device is connected and its signals are connected.
|
||||
Default values for signals should be set here.
|
||||
"""
|
||||
self.scan_control.scan_progress.subscribe(self._progress_update, run=False)
|
||||
|
||||
def on_stage(self) -> DeviceStatus | StatusBase | None:
|
||||
"""
|
||||
Called while staging the device.
|
||||
|
||||
Information about the upcoming scan can be accessed from the scan_info (self.scan_info.msg) object.
|
||||
"""
|
||||
self._check_scan_msg(ScanControlLoadMessage.PENDING)
|
||||
|
||||
scan_name = self.scan_info.msg.scan_name
|
||||
self._update_scan_parameter()
|
||||
if scan_name == "xas_simple_scan":
|
||||
self.set_xas_settings(
|
||||
low=self.scan_parameter.start,
|
||||
high=self.scan_parameter.stop,
|
||||
scan_time=self.scan_parameter.scan_time,
|
||||
)
|
||||
self.set_trig_settings(
|
||||
enable_low=False,
|
||||
enable_high=False,
|
||||
exp_time_low=0,
|
||||
exp_time_high=0,
|
||||
cycle_low=0,
|
||||
cycle_high=0,
|
||||
)
|
||||
self.set_scan_control_settings(
|
||||
mode=ScanControlMode.SIMPLE, scan_duration=self.scan_parameter.scan_duration
|
||||
)
|
||||
elif scan_name == "xas_simple_scan_with_xrd":
|
||||
self.set_xas_settings(
|
||||
low=self.scan_parameter.start,
|
||||
high=self.scan_parameter.stop,
|
||||
scan_time=self.scan_parameter.scan_time,
|
||||
)
|
||||
self.set_trig_settings(
|
||||
enable_low=self.scan_parameter.xrd_enable_low, # enable_low=self.scan_parameter.trig_enable_low,
|
||||
enable_high=self.scan_parameter.xrd_enable_high, # enable_high=self.scan_parameter.trig_enable_high,
|
||||
exp_time_low=self.scan_parameter.exp_time_low,
|
||||
exp_time_high=self.scan_parameter.exp_time_high,
|
||||
cycle_low=self.scan_parameter.cycle_low,
|
||||
cycle_high=self.scan_parameter.cycle_high,
|
||||
)
|
||||
self.set_scan_control_settings(
|
||||
mode=ScanControlMode.SIMPLE, scan_duration=self.scan_parameter.scan_duration
|
||||
)
|
||||
elif scan_name == "xas_advanced_scan":
|
||||
self.set_advanced_xas_settings(
|
||||
low=self.scan_parameter.start,
|
||||
high=self.scan_parameter.stop,
|
||||
scan_time=self.scan_parameter.scan_time,
|
||||
p_kink=self.scan_parameter.p_kink,
|
||||
e_kink=self.scan_parameter.e_kink,
|
||||
)
|
||||
self.set_trig_settings(
|
||||
enable_low=False,
|
||||
enable_high=False,
|
||||
exp_time_low=0,
|
||||
exp_time_high=0,
|
||||
cycle_low=0,
|
||||
cycle_high=0,
|
||||
)
|
||||
self.set_scan_control_settings(
|
||||
mode=ScanControlMode.ADVANCED, scan_duration=self.scan_parameter.scan_duration
|
||||
)
|
||||
elif scan_name == "xas_advanced_scan_with_xrd":
|
||||
self.set_advanced_xas_settings(
|
||||
low=self.scan_parameter.start,
|
||||
high=self.scan_parameter.stop,
|
||||
scan_time=self.scan_parameter.scan_time,
|
||||
p_kink=self.scan_parameter.p_kink,
|
||||
e_kink=self.scan_parameter.e_kink,
|
||||
)
|
||||
self.set_trig_settings(
|
||||
enable_low=self.scan_parameter.xrd_enable_low, # enable_low=self.scan_parameter.trig_enable_low,
|
||||
enable_high=self.scan_parameter.xrd_enable_high, # enable_high=self.scan_parameter.trig_enable_high,
|
||||
exp_time_low=self.scan_parameter.exp_time_low,
|
||||
exp_time_high=self.scan_parameter.exp_time_high,
|
||||
cycle_low=self.scan_parameter.cycle_low,
|
||||
cycle_high=self.scan_parameter.cycle_high,
|
||||
)
|
||||
self.set_scan_control_settings(
|
||||
mode=ScanControlMode.ADVANCED, scan_duration=self.scan_parameter.scan_duration
|
||||
)
|
||||
else:
|
||||
return
|
||||
# Load the scan parameters to the controller
|
||||
self.scan_control.scan_load.put(1)
|
||||
# Wait for params to be checked from controller
|
||||
self.wait_for_signal(
|
||||
self.scan_control.scan_msg,
|
||||
ScanControlLoadMessage.SUCCESS,
|
||||
timeout=2 * self.timeout_for_pvwait,
|
||||
)
|
||||
return None
|
||||
|
||||
def on_unstage(self) -> DeviceStatus | StatusBase | None:
|
||||
"""Called while unstaging the device."""
|
||||
if self.stopped is True:
|
||||
logger.warning(f"Resetting stopped in unstage for device {self.name}.")
|
||||
self._stopped = False
|
||||
current_state = self.scan_control.scan_msg.get()
|
||||
# Case 1, message is already ScanControlLoadMessage.PENDING
|
||||
if current_state == ScanControlLoadMessage.PENDING:
|
||||
return None
|
||||
# Case 2, probably called after scan, backend should resolve on its own. Timeout to wait
|
||||
if current_state in [ScanControlLoadMessage.STARTED, ScanControlLoadMessage.SUCCESS]:
|
||||
try:
|
||||
self.wait_for_signal(
|
||||
self.scan_control.scan_msg,
|
||||
ScanControlLoadMessage.PENDING,
|
||||
timeout=self.timeout_for_pvwait,
|
||||
)
|
||||
return
|
||||
except TimeoutError:
|
||||
logger.warning(
|
||||
f"Timeout in on_unstage of {self.name} after {self.timeout_for_pvwait}s, current scan_control_message : {self.scan_control.scan_msg.get()}"
|
||||
)
|
||||
|
||||
def callback(*, old_value, value, **kwargs):
|
||||
if value == ScanControlLoadMessage.PENDING:
|
||||
return True
|
||||
return False
|
||||
|
||||
status = SubscriptionStatus(self.scan_control.scan_msg, callback=callback)
|
||||
self.scan_control.scan_val_reset.put(1)
|
||||
status.wait(timeout=self.timeout_for_pvwait)
|
||||
return None
|
||||
|
||||
def on_pre_scan(self) -> DeviceStatus | StatusBase | None:
|
||||
"""Called right before the scan starts on all devices automatically."""
|
||||
|
||||
def on_trigger(self) -> DeviceStatus | StatusBase | None:
|
||||
"""Called when the device is triggered."""
|
||||
|
||||
def on_complete(self) -> DeviceStatus | StatusBase | None:
|
||||
"""Called to inquire if a device has completed a scans."""
|
||||
|
||||
def wait_for_complete():
|
||||
"""Wait for the scan to complete. No timeout is set."""
|
||||
start_time = time.time()
|
||||
while True:
|
||||
if self.stopped is True:
|
||||
raise DeviceStopError(
|
||||
f"Device {self.name} was stopped while waiting for scan to complete"
|
||||
)
|
||||
if self.scan_control.scan_done.get() == 1:
|
||||
return
|
||||
time.sleep(0.1)
|
||||
|
||||
status = self.task_handler.submit_task(wait_for_complete)
|
||||
return status
|
||||
|
||||
def on_kickoff(self) -> DeviceStatus | StatusBase | None:
|
||||
"""Called to kickoff a device for a fly scan. Has to be called explicitly."""
|
||||
scan_duration = self.scan_control.scan_duration.get()
|
||||
# TODO implement better logic for infinite scans, at least bring it up with Debye
|
||||
start_func = (
|
||||
self.scan_control.scan_start_infinite.put
|
||||
if scan_duration < 0.1
|
||||
else self.scan_control.scan_start_timer.put
|
||||
)
|
||||
|
||||
def callback(*, old_value, value, **kwargs):
|
||||
if old_value == ScanControlScanStatus.READY and value == ScanControlScanStatus.RUNNING:
|
||||
return True
|
||||
return False
|
||||
|
||||
status = SubscriptionStatus(self.scan_control.scan_status, callback=callback)
|
||||
start_func(1)
|
||||
return status
|
||||
|
||||
def on_stop(self) -> None:
|
||||
"""Called when the device is stopped."""
|
||||
self.stopped = True # Needs to be set to stop motion
|
||||
|
||||
######### Utility Methods #########
|
||||
|
||||
# FIXME this should become the ProgressSignal
|
||||
# pylint: disable=unused-argument
|
||||
def _progress_update(self, value, **kwargs) -> None:
|
||||
"""Callback method to update the scan progress, runs a callback
|
||||
to SUB_PROGRESS subscribers, i.e. BEC.
|
||||
|
||||
Args:
|
||||
value (int) : current progress value
|
||||
"""
|
||||
max_value = 100
|
||||
self._run_subs(
|
||||
sub_type=self.SUB_PROGRESS,
|
||||
value=value,
|
||||
max_value=max_value,
|
||||
done=bool(max_value == value),
|
||||
)
|
||||
|
||||
def set_xas_settings(self, low: float, high: float, scan_time: float) -> None:
|
||||
"""Set XAS parameters for upcoming scan.
|
||||
|
||||
Args:
|
||||
low (float): Low energy/angle value of the scan
|
||||
high (float): High energy/angle value of the scan
|
||||
scan_time (float): Time for a half oscillation
|
||||
"""
|
||||
self.scan_settings.s_scan_energy_lo.put(low)
|
||||
self.scan_settings.s_scan_energy_hi.put(high)
|
||||
self.scan_settings.s_scan_scantime.put(scan_time)
|
||||
|
||||
def wait_for_signal(self, signal: Cpt, value: Any, timeout: float | None = None) -> None:
|
||||
"""Wait for a signal to reach a certain value."""
|
||||
if timeout is None:
|
||||
timeout = self.timeout_for_pvwait
|
||||
start_time = time.time()
|
||||
while time.time() - start_time < timeout:
|
||||
if signal.get() == value:
|
||||
return None
|
||||
if self.stopped is True: # Should this check be optional or configurable?!
|
||||
raise DeviceStopError(f"Device {self.name} was stopped while waiting for signal")
|
||||
time.sleep(0.1)
|
||||
# If we end up here, the status did not resolve
|
||||
raise TimeoutError(
|
||||
f"Device {self.name} run into timeout after {timeout}s for signal {signal.name} with value {signal.get()}, expected {value}"
|
||||
)
|
||||
|
||||
@typechecked
|
||||
def convert_angle_energy(
|
||||
self, mode: Literal["AngleToEnergy", "EnergyToAngle"], inp: float
|
||||
) -> float:
|
||||
"""Calculate energy to angle or vice versa
|
||||
|
||||
Args:
|
||||
mode (Literal["AngleToEnergy", "EnergyToAngle"]): Mode of calculation
|
||||
input (float): Either angle or energy
|
||||
|
||||
Returns:
|
||||
output (float): Converted angle or energy
|
||||
"""
|
||||
self.calculator.calc_reset.put(0)
|
||||
self.calculator.calc_reset.put(1)
|
||||
self.wait_for_signal(self.calculator.calc_done, 0)
|
||||
|
||||
if mode == "AngleToEnergy":
|
||||
self.calculator.calc_angle.put(inp)
|
||||
elif mode == "EnergyToAngle":
|
||||
self.calculator.calc_energy.put(inp)
|
||||
|
||||
self.wait_for_signal(self.calculator.calc_done, 1)
|
||||
time.sleep(0.25) # Needed due to update frequency of softIOC
|
||||
if mode == "AngleToEnergy":
|
||||
return self.calculator.calc_energy.get()
|
||||
elif mode == "EnergyToAngle":
|
||||
return self.calculator.calc_angle.get()
|
||||
|
||||
def set_advanced_xas_settings(
|
||||
self, low: float, high: float, scan_time: float, p_kink: float, e_kink: float
|
||||
) -> None:
|
||||
"""Set Advanced XAS parameters for upcoming scan.
|
||||
|
||||
Args:
|
||||
low (float): Low angle value of the scan in eV
|
||||
high (float): High angle value of the scan in eV
|
||||
scan_time (float): Time for a half oscillation in s
|
||||
p_kink (float): Position of kink in %
|
||||
e_kink (float): Energy of kink in eV
|
||||
"""
|
||||
e_kink_deg = self.convert_angle_energy(mode="EnergyToAngle", inp=e_kink)
|
||||
# Angle and Energy are inverse proportional!
|
||||
high_deg = self.convert_angle_energy(mode="EnergyToAngle", inp=low)
|
||||
low_deg = self.convert_angle_energy(mode="EnergyToAngle", inp=high)
|
||||
|
||||
pos, vel, dt = compute_spline(
|
||||
low_deg=low_deg,
|
||||
high_deg=high_deg,
|
||||
p_kink=p_kink,
|
||||
e_kink_deg=e_kink_deg,
|
||||
scan_time=scan_time,
|
||||
)
|
||||
|
||||
self.scan_settings.a_scan_pos.set(pos)
|
||||
self.scan_settings.a_scan_vel.set(vel)
|
||||
self.scan_settings.a_scan_time.set(dt)
|
||||
|
||||
def set_trig_settings(
|
||||
self,
|
||||
enable_low: bool,
|
||||
enable_high: bool,
|
||||
exp_time_low: int,
|
||||
exp_time_high: int,
|
||||
cycle_low: int,
|
||||
cycle_high: int,
|
||||
) -> None:
|
||||
"""Set TRIG settings for the upcoming scan.
|
||||
|
||||
Args:
|
||||
enable_low (bool): Enable TRIG for low energy/angle
|
||||
enable_high (bool): Enable TRIG for high energy/angle
|
||||
num_trigger_low (int): Number of triggers for low energy/angle
|
||||
num_trigger_high (int): Number of triggers for high energy/angle
|
||||
exp_time_low (int): Exposure time for low energy/angle
|
||||
exp_time_high (int): Exposure time for high energy/angle
|
||||
cycle_low (int): Cycle for low energy/angle
|
||||
cycle_high (int): Cycle for high energy/angle
|
||||
"""
|
||||
self.scan_settings.trig_ena_hi_enum.put(int(enable_high))
|
||||
self.scan_settings.trig_ena_lo_enum.put(int(enable_low))
|
||||
self.scan_settings.trig_time_hi.put(exp_time_high)
|
||||
self.scan_settings.trig_time_lo.put(exp_time_low)
|
||||
self.scan_settings.trig_every_n_hi.put(cycle_high)
|
||||
self.scan_settings.trig_every_n_lo.put(cycle_low)
|
||||
|
||||
def set_scan_control_settings(self, mode: ScanControlMode, scan_duration: float) -> None:
|
||||
"""Set the scan control settings for the upcoming scan.
|
||||
|
||||
Args:
|
||||
mode (ScanControlMode): Mode for the scan, either simple or advanced
|
||||
scan_duration (float): Duration of the scan
|
||||
"""
|
||||
val = ScanControlMode(mode).value
|
||||
self.scan_control.scan_mode_enum.put(val)
|
||||
self.scan_control.scan_duration.put(scan_duration)
|
||||
|
||||
def _update_scan_parameter(self):
|
||||
"""Get the scan_info parameters for the scan."""
|
||||
for key, value in self.scan_info.msg.request_inputs["inputs"].items():
|
||||
if hasattr(self.scan_parameter, key):
|
||||
setattr(self.scan_parameter, key, value)
|
||||
for key, value in self.scan_info.msg.request_inputs["kwargs"].items():
|
||||
if hasattr(self.scan_parameter, key):
|
||||
setattr(self.scan_parameter, key, value)
|
||||
|
||||
def _check_scan_msg(self, target_state: ScanControlLoadMessage) -> None:
|
||||
"""Check if the scan message is gettting available
|
||||
|
||||
Args:
|
||||
target_state (ScanControlLoadMessage): Target state to check for
|
||||
|
||||
Raises:
|
||||
TimeoutError: If the scan message is not available after the timeout
|
||||
"""
|
||||
try:
|
||||
self.wait_for_signal(self.scan_control.scan_msg, target_state, timeout=1)
|
||||
except TimeoutError as exc:
|
||||
logger.warning(
|
||||
f"Resetting scan validation in stage for state: {ScanControlLoadMessage(self.scan_control.scan_msg.get())}, "
|
||||
f"retry .get() on scan_control: {ScanControlLoadMessage(self.scan_control.scan_msg.get())} and sleeping 1s"
|
||||
)
|
||||
current_scan_msg = self.scan_control.scan_msg.get()
|
||||
|
||||
def callback(*, old_value, value, **kwargs):
|
||||
if old_value == current_scan_msg and value == target_state:
|
||||
return True
|
||||
return False
|
||||
|
||||
status = SubscriptionStatus(self.scan_control.scan_msg, callback=callback)
|
||||
self.scan_control.scan_val_reset.put(1)
|
||||
|
||||
status.wait(timeout=self.timeout_for_pvwait)
|
||||
|
||||
# try:
|
||||
# self.wait_for_signal(self.scan_control.scan_msg, target_state, timeout=4)
|
||||
# except TimeoutError as exc:
|
||||
# raise TimeoutError(
|
||||
# f"Timeout after {self.timeout_for_pvwait} while waiting for scan status,"
|
||||
# f" current state: {ScanControlScanStatus(self.scan_control.scan_msg.get())}"
|
||||
# ) from exc
|
||||
20
debye_bec/devices/mo1_bragg/mo1_bragg_angle.py
Normal file
20
debye_bec/devices/mo1_bragg/mo1_bragg_angle.py
Normal file
@@ -0,0 +1,20 @@
|
||||
"""Positioner implementation with readback angle of the MO1 Bragg positioner."""
|
||||
|
||||
from ophyd import Component as Cpt
|
||||
from ophyd import EpicsSignalRO, EpicsSignalWithRBV
|
||||
|
||||
from debye_bec.devices.mo1_bragg.mo1_bragg_devices import Mo1BraggPositioner
|
||||
|
||||
|
||||
class Mo1BraggAngle(Mo1BraggPositioner):
|
||||
"""Positioner implementation with readback angle of the MO1 Bragg positioner."""
|
||||
|
||||
readback = Cpt(EpicsSignalRO, suffix="feedback_pos_angle_RBV", kind="normal", auto_monitor=True)
|
||||
setpoint = Cpt(EpicsSignalWithRBV, suffix="set_abs_pos_angle", kind="normal", auto_monitor=True)
|
||||
low_lim = Cpt(EpicsSignalRO, suffix="lo_lim_pos_angle_RBV", kind="config", auto_monitor=True)
|
||||
high_lim = Cpt(EpicsSignalRO, suffix="hi_lim_pos_angle_RBV", kind="config", auto_monitor=True)
|
||||
|
||||
@property
|
||||
def egu(self) -> str:
|
||||
"""Return the engineering unit of the positioner."""
|
||||
return "deg"
|
||||
408
debye_bec/devices/mo1_bragg/mo1_bragg_devices.py
Normal file
408
debye_bec/devices/mo1_bragg/mo1_bragg_devices.py
Normal file
@@ -0,0 +1,408 @@
|
||||
"""Module for the Mo1 Bragg positioner"""
|
||||
|
||||
import threading
|
||||
import time
|
||||
import traceback
|
||||
from typing import Literal
|
||||
|
||||
from bec_lib.logger import bec_logger
|
||||
from ophyd import Component as Cpt
|
||||
from ophyd import (
|
||||
Device,
|
||||
DeviceStatus,
|
||||
EpicsSignal,
|
||||
EpicsSignalRO,
|
||||
EpicsSignalWithRBV,
|
||||
PositionerBase,
|
||||
Signal,
|
||||
)
|
||||
from ophyd.utils import LimitError
|
||||
|
||||
from debye_bec.devices.mo1_bragg.mo1_bragg_enums import MoveType
|
||||
|
||||
# Initialise logger
|
||||
logger = bec_logger.logger
|
||||
|
||||
############# Exceptions #############
|
||||
|
||||
|
||||
class Mo1BraggStoppedError(Exception):
|
||||
"""Exception to raise when the Bragg positioner is stopped."""
|
||||
|
||||
|
||||
############# Signal classes #############
|
||||
|
||||
|
||||
class MoveTypeSignal(Signal):
|
||||
"""Custom Signal to set the move type of the Bragg positioner"""
|
||||
|
||||
# pylint: disable=arguments-differ
|
||||
def set(self, value: str | MoveType) -> None:
|
||||
"""Returns currently active move method
|
||||
|
||||
Args:
|
||||
value (str | MoveType) : Can be either 'energy' or 'angle'
|
||||
"""
|
||||
|
||||
value = MoveType(value.lower())
|
||||
self._readback = value.value
|
||||
|
||||
|
||||
############# Utility devices to separate the namespace #############
|
||||
|
||||
|
||||
class Mo1BraggStatus(Device):
|
||||
"""Mo1 Bragg PVs for status monitoring"""
|
||||
|
||||
error_status = Cpt(EpicsSignalRO, suffix="error_status_RBV", kind="config", auto_monitor=True)
|
||||
brake_enabled = Cpt(EpicsSignalRO, suffix="brake_enabled_RBV", kind="config", auto_monitor=True)
|
||||
mot_commutated = Cpt(
|
||||
EpicsSignalRO, suffix="mot_commutated_RBV", kind="config", auto_monitor=True
|
||||
)
|
||||
axis_enabled = Cpt(EpicsSignalRO, suffix="axis_enabled_RBV", kind="config", auto_monitor=True)
|
||||
enc_initialized = Cpt(
|
||||
EpicsSignalRO, suffix="enc_initialized_RBV", kind="config", auto_monitor=True
|
||||
)
|
||||
heartbeat = Cpt(EpicsSignalRO, suffix="heartbeat_RBV", kind="config", auto_monitor=True)
|
||||
|
||||
|
||||
class Mo1BraggEncoder(Device):
|
||||
"""Mo1 Bragg PVs to communicate with the encoder"""
|
||||
|
||||
enc_reinit = Cpt(EpicsSignal, suffix="enc_reinit", kind="config")
|
||||
enc_reinit_done = Cpt(EpicsSignalRO, suffix="enc_reinit_done_RBV", kind="config")
|
||||
|
||||
|
||||
class Mo1BraggCrystal(Device):
|
||||
"""Mo1 Bragg PVs to set the crystal parameters"""
|
||||
|
||||
offset_si111 = Cpt(EpicsSignalWithRBV, suffix="offset_si111", kind="config")
|
||||
offset_si311 = Cpt(EpicsSignalWithRBV, suffix="offset_si311", kind="config")
|
||||
xtal_enum = Cpt(EpicsSignalWithRBV, suffix="xtal_ENUM", kind="config")
|
||||
d_spacing_si111 = Cpt(EpicsSignalWithRBV, suffix="d_spacing_si111", kind="config")
|
||||
d_spacing_si311 = Cpt(EpicsSignalWithRBV, suffix="d_spacing_si311", kind="config")
|
||||
set_offset = Cpt(EpicsSignal, suffix="set_offset", kind="config", put_complete=True)
|
||||
current_xtal = Cpt(
|
||||
EpicsSignalRO, suffix="current_xtal_ENUM_RBV", kind="normal", auto_monitor=True
|
||||
)
|
||||
|
||||
|
||||
class Mo1BraggScanSettings(Device):
|
||||
"""Mo1 Bragg PVs to set the scan setttings"""
|
||||
|
||||
# TRIG settings
|
||||
trig_select_ref_enum = Cpt(EpicsSignalWithRBV, suffix="trig_select_ref_ENUM", kind="config")
|
||||
|
||||
trig_ena_hi_enum = Cpt(EpicsSignalWithRBV, suffix="trig_ena_hi_ENUM", kind="config")
|
||||
trig_time_hi = Cpt(EpicsSignalWithRBV, suffix="trig_time_hi", kind="config")
|
||||
trig_every_n_hi = Cpt(EpicsSignalWithRBV, suffix="trig_every_n_hi", kind="config")
|
||||
|
||||
trig_ena_lo_enum = Cpt(EpicsSignalWithRBV, suffix="trig_ena_lo_ENUM", kind="config")
|
||||
trig_time_lo = Cpt(EpicsSignalWithRBV, suffix="trig_time_lo", kind="config")
|
||||
trig_every_n_lo = Cpt(EpicsSignalWithRBV, suffix="trig_every_n_lo", kind="config")
|
||||
|
||||
# XAS simple scan settings
|
||||
s_scan_angle_hi = Cpt(EpicsSignalWithRBV, suffix="s_scan_angle_hi", kind="config")
|
||||
s_scan_angle_lo = Cpt(EpicsSignalWithRBV, suffix="s_scan_angle_lo", kind="config")
|
||||
s_scan_energy_lo = Cpt(
|
||||
EpicsSignalWithRBV, suffix="s_scan_energy_lo", kind="config", auto_monitor=True
|
||||
)
|
||||
s_scan_energy_hi = Cpt(
|
||||
EpicsSignalWithRBV, suffix="s_scan_energy_hi", kind="config", auto_monitor=True
|
||||
)
|
||||
s_scan_scantime = Cpt(
|
||||
EpicsSignalWithRBV, suffix="s_scan_scantime", kind="config", auto_monitor=True
|
||||
)
|
||||
|
||||
# XAS advanced scan settings
|
||||
a_scan_pos = Cpt(EpicsSignalWithRBV, suffix="a_scan_pos", kind="config", auto_monitor=True)
|
||||
a_scan_vel = Cpt(EpicsSignalWithRBV, suffix="a_scan_vel", kind="config", auto_monitor=True)
|
||||
a_scan_time = Cpt(EpicsSignalWithRBV, suffix="a_scan_time", kind="config", auto_monitor=True)
|
||||
|
||||
|
||||
class Mo1TriggerSettings(Device):
|
||||
"""Mo1 Trigger settings"""
|
||||
|
||||
settle_time = Cpt(EpicsSignalWithRBV, suffix="settle_time", kind="config")
|
||||
max_dev = Cpt(EpicsSignalWithRBV, suffix="max_dev", kind="config")
|
||||
|
||||
xrd_trig_src_enum = Cpt(EpicsSignalWithRBV, suffix="xrd_trig_src_ENUM", kind="config")
|
||||
xrd_trig_mode_enum = Cpt(EpicsSignalWithRBV, suffix="xrd_trig_mode_ENUM", kind="config")
|
||||
xrd_trig_len = Cpt(EpicsSignalWithRBV, suffix="xrd_trig_len", kind="config")
|
||||
xrd_trig_req = Cpt(EpicsSignal, suffix="xrd_trig_req", kind="config")
|
||||
|
||||
falcon_trig_src_enum = Cpt(EpicsSignalWithRBV, suffix="falcon_trig_src_ENUM", kind="config")
|
||||
falcon_trig_mode_enum = Cpt(EpicsSignalWithRBV, suffix="falcon_trig_mode_ENUM", kind="config")
|
||||
falcon_trig_len = Cpt(EpicsSignalWithRBV, suffix="falcon_trig_len", kind="config")
|
||||
falcon_trig_req = Cpt(EpicsSignal, suffix="falcon_trig_req", kind="config")
|
||||
|
||||
univ1_trig_src_enum = Cpt(EpicsSignalWithRBV, suffix="univ1_trig_src_ENUM", kind="config")
|
||||
univ1_trig_mode_enum = Cpt(EpicsSignalWithRBV, suffix="univ1_trig_mode_ENUM", kind="config")
|
||||
univ1_trig_len = Cpt(EpicsSignalWithRBV, suffix="univ1_trig_len", kind="config")
|
||||
univ1_trig_req = Cpt(EpicsSignal, suffix="univ1_trig_req", kind="config")
|
||||
|
||||
univ2_trig_src_enum = Cpt(EpicsSignalWithRBV, suffix="univ2_trig_src_ENUM", kind="config")
|
||||
univ2_trig_mode_enum = Cpt(EpicsSignalWithRBV, suffix="univ2_trig_mode_ENUM", kind="config")
|
||||
univ2_trig_len = Cpt(EpicsSignalWithRBV, suffix="univ2_trig_len", kind="config")
|
||||
univ2_trig_req = Cpt(EpicsSignal, suffix="univ2_trig_req", kind="config")
|
||||
|
||||
|
||||
class Mo1BraggCalculator(Device):
|
||||
"""Mo1 Bragg PVs to convert angle to energy or vice-versa."""
|
||||
|
||||
calc_reset = Cpt(EpicsSignal, suffix="calc_reset", kind="config", put_complete=True)
|
||||
calc_done = Cpt(EpicsSignalRO, suffix="calc_done_RBV", kind="config")
|
||||
calc_energy = Cpt(EpicsSignalWithRBV, suffix="calc_energy", kind="config")
|
||||
calc_angle = Cpt(EpicsSignalWithRBV, suffix="calc_angle", kind="config")
|
||||
|
||||
|
||||
class Mo1BraggScanControl(Device):
|
||||
"""Mo1 Bragg PVs to control the scan after setting the parameters."""
|
||||
|
||||
scan_mode_enum = Cpt(EpicsSignalWithRBV, suffix="scan_mode_ENUM", kind="config")
|
||||
scan_duration = Cpt(
|
||||
EpicsSignalWithRBV, suffix="scan_duration", kind="config", auto_monitor=True
|
||||
)
|
||||
scan_load = Cpt(EpicsSignal, suffix="scan_load", kind="config", put_complete=True)
|
||||
scan_msg = Cpt(EpicsSignalRO, suffix="scan_msg_ENUM_RBV", kind="config", auto_monitor=True)
|
||||
scan_start_infinite = Cpt(
|
||||
EpicsSignal, suffix="scan_start_infinite", kind="config", put_complete=True
|
||||
)
|
||||
scan_start_timer = Cpt(EpicsSignal, suffix="scan_start_timer", kind="config", put_complete=True)
|
||||
scan_stop = Cpt(EpicsSignal, suffix="scan_stop", kind="config", put_complete=True)
|
||||
scan_status = Cpt(
|
||||
EpicsSignalRO, suffix="scan_status_ENUM_RBV", kind="config", auto_monitor=True
|
||||
)
|
||||
scan_time_left = Cpt(
|
||||
EpicsSignalRO, suffix="scan_time_left_RBV", kind="config", auto_monitor=True
|
||||
)
|
||||
scan_done = Cpt(EpicsSignalRO, suffix="scan_done_RBV", kind="config", auto_monitor=True)
|
||||
scan_val_reset = Cpt(EpicsSignal, suffix="scan_val_reset", kind="config", put_complete=True)
|
||||
scan_progress = Cpt(EpicsSignalRO, suffix="scan_progress_RBV", kind="config", auto_monitor=True)
|
||||
scan_spectra_done = Cpt(
|
||||
EpicsSignalRO, suffix="scan_n_osc_RBV", kind="config", auto_monitor=True
|
||||
)
|
||||
scan_spectra_left = Cpt(
|
||||
EpicsSignalRO, suffix="scan_n_osc_left_RBV", kind="config", auto_monitor=True
|
||||
)
|
||||
|
||||
|
||||
class Mo1BraggPositioner(Device, PositionerBase):
|
||||
"""
|
||||
Positioner implementation with readback energy of the MO1 Bragg positioner.
|
||||
|
||||
The prefix to connect to the soft IOC is X01DA-OP-MO1:BRAGG:
|
||||
This soft IOC connects to the NI motor and its control loop.
|
||||
"""
|
||||
|
||||
USER_ACCESS = ["set_xtal"]
|
||||
|
||||
####### Sub-components ########
|
||||
# Namespace is cleaner and easier to maintain
|
||||
crystal = Cpt(Mo1BraggCrystal, "")
|
||||
encoder = Cpt(Mo1BraggEncoder, "")
|
||||
scan_settings = Cpt(Mo1BraggScanSettings, "")
|
||||
trigger_settings = Cpt(Mo1TriggerSettings, "")
|
||||
calculator = Cpt(Mo1BraggCalculator, "")
|
||||
scan_control = Cpt(Mo1BraggScanControl, "")
|
||||
status = Cpt(Mo1BraggStatus, "")
|
||||
|
||||
############# Energy PVs #############
|
||||
|
||||
readback = Cpt(
|
||||
EpicsSignalRO, suffix="feedback_pos_energy_RBV", kind="hinted", auto_monitor=True
|
||||
)
|
||||
setpoint = Cpt(
|
||||
EpicsSignalWithRBV, suffix="set_abs_pos_energy", kind="normal", auto_monitor=True
|
||||
)
|
||||
motor_is_moving = Cpt(
|
||||
EpicsSignalRO, suffix="move_abs_done_RBV", kind="normal", auto_monitor=True
|
||||
)
|
||||
low_lim = Cpt(EpicsSignalRO, suffix="lo_lim_pos_energy_RBV", kind="config", auto_monitor=True)
|
||||
high_lim = Cpt(EpicsSignalRO, suffix="hi_lim_pos_energy_RBV", kind="config", auto_monitor=True)
|
||||
velocity = Cpt(EpicsSignalWithRBV, suffix="move_velocity", kind="config", auto_monitor=True)
|
||||
|
||||
########## Move Command PVs ##########
|
||||
|
||||
move_abs = Cpt(EpicsSignal, suffix="move_abs", kind="config", put_complete=True)
|
||||
move_stop = Cpt(EpicsSignal, suffix="move_stop", kind="config", put_complete=True)
|
||||
|
||||
SUB_READBACK = "readback"
|
||||
_default_sub = SUB_READBACK
|
||||
SUB_PROGRESS = "progress"
|
||||
|
||||
def __init__(self, prefix="", *, name: str, **kwargs):
|
||||
"""Initialize the Mo1 Bragg positioner.
|
||||
|
||||
Args:
|
||||
prefix (str): EPICS prefix for the device
|
||||
name (str): Name of the device
|
||||
kwargs: Additional keyword arguments
|
||||
"""
|
||||
super().__init__(prefix, name=name, **kwargs)
|
||||
self._move_thread = None
|
||||
self._stopped = False
|
||||
self.readback.name = self.name
|
||||
|
||||
def stop(self, *, success=False) -> None:
|
||||
"""Stop any motion on the positioner
|
||||
|
||||
Args:
|
||||
success (bool) : Flag to indicate if the motion was successful
|
||||
"""
|
||||
self.move_stop.put(1)
|
||||
self._stopped = True
|
||||
super().stop(success=success)
|
||||
|
||||
def stop_scan(self) -> None:
|
||||
"""Stop the currently running scan gracefully, this finishes the running oscillation."""
|
||||
self.scan_control.scan_stop.put(1)
|
||||
|
||||
@property
|
||||
def stopped(self) -> bool:
|
||||
"""Return the status of the positioner"""
|
||||
return self._stopped
|
||||
|
||||
######### Positioner specific methods #########
|
||||
|
||||
@property
|
||||
def limits(self) -> tuple:
|
||||
"""Return limits of the Bragg positioner"""
|
||||
return (self.low_lim.get(), self.high_lim.get())
|
||||
|
||||
@property
|
||||
def low_limit(self) -> float:
|
||||
"""Return low limit of axis"""
|
||||
return self.limits[0]
|
||||
|
||||
@property
|
||||
def high_limit(self) -> float:
|
||||
"""Return high limit of axis"""
|
||||
return self.limits[1]
|
||||
|
||||
@property
|
||||
def egu(self) -> str:
|
||||
"""Return the engineering units of the positioner"""
|
||||
return "eV"
|
||||
|
||||
@property
|
||||
def position(self) -> float:
|
||||
"""Return the current position of Mo1Bragg, considering the move type"""
|
||||
return self.readback.get()
|
||||
|
||||
# pylint: disable=arguments-differ
|
||||
def check_value(self, value: float) -> None:
|
||||
"""Method to check if a value is within limits of the positioner.
|
||||
Called by PositionerBase.move()
|
||||
|
||||
Args:
|
||||
value (float) : value to move axis to.
|
||||
"""
|
||||
low_limit, high_limit = self.limits
|
||||
|
||||
if low_limit < high_limit and not low_limit <= value <= high_limit:
|
||||
raise LimitError(f"position={value} not within limits {self.limits}")
|
||||
|
||||
def _move_and_finish(
|
||||
self, target_pos: float, status: DeviceStatus, update_frequency: float = 0.1
|
||||
) -> None:
|
||||
"""
|
||||
Method to be called in the move thread to move the Bragg positioner
|
||||
to the target position.
|
||||
|
||||
Args:
|
||||
target_pos (float) : target position for the motion
|
||||
move_cpt (Cpt) : component to set the target position on the IOC,
|
||||
either setpoint or setpoint_abs_angle depending
|
||||
on the move type
|
||||
read_cpt (Cpt) : component to read the current position of the motion,
|
||||
readback or feedback_pos_angle
|
||||
status (DeviceStatus) : status object to set the status of the motion
|
||||
update_frequency (float): Optional, frequency to update the current position of
|
||||
the motion, defaults to 0.1s
|
||||
"""
|
||||
motor_name = None
|
||||
try:
|
||||
# Set the target position on IOC
|
||||
self.setpoint.put(target_pos)
|
||||
self.move_abs.put(1)
|
||||
# Currently sleep is needed due to delay in updates on PVs, maybe time can be reduced
|
||||
time.sleep(0.5)
|
||||
motor_name = self.name
|
||||
while self.motor_is_moving.get() == 0:
|
||||
if self.stopped:
|
||||
raise Mo1BraggStoppedError(f"Device {self.name} was stopped")
|
||||
time.sleep(update_frequency)
|
||||
# pylint: disable=protected-access
|
||||
status.set_finished()
|
||||
# pylint: disable=broad-except
|
||||
except Exception as exc:
|
||||
content = traceback.format_exc()
|
||||
logger.error(
|
||||
f"Error in move thread of device {motor_name if motor_name else ''}: {content}"
|
||||
)
|
||||
status.set_exception(exc=exc)
|
||||
|
||||
def move(self, value: float, **kwargs) -> DeviceStatus:
|
||||
"""
|
||||
Move the Bragg positioner to the specified value, allows to
|
||||
switch between move types angle and energy.
|
||||
|
||||
Args:
|
||||
value (float) : target value for the motion
|
||||
move_type (str | MoveType) : Optional, specify the type of move,
|
||||
either 'energy' or 'angle'
|
||||
|
||||
Returns:
|
||||
DeviceStatus : status object to track the motion
|
||||
"""
|
||||
self._stopped = False
|
||||
|
||||
self.check_value(value)
|
||||
status = DeviceStatus(device=self)
|
||||
|
||||
self._move_thread = threading.Thread(
|
||||
target=self._move_and_finish, args=(value, status, 0.1)
|
||||
)
|
||||
self._move_thread.start()
|
||||
return status
|
||||
|
||||
# -------------- End of Positioner specific methods -----------------#
|
||||
|
||||
# -------------- MO1 Bragg specific methods -----------------#
|
||||
|
||||
def set_xtal(
|
||||
self,
|
||||
xtal_enum: Literal["111", "311"],
|
||||
offset_si111: float = None,
|
||||
offset_si311: float = None,
|
||||
d_spacing_si111: float = None,
|
||||
d_spacing_si311: float = None,
|
||||
) -> None:
|
||||
"""Method to set the crystal parameters of the Bragg positioner
|
||||
|
||||
Args:
|
||||
xtal_enum (Literal["111", "311"]) : Enum to set the crystal orientation
|
||||
offset_si111 (float) : Offset for the 111 crystal
|
||||
offset_si311 (float) : Offset for the 311 crystal
|
||||
d_spacing_si111 (float) : d-spacing for the 111 crystal
|
||||
d_spacing_si311 (float) : d-spacing for the 311 crystal
|
||||
"""
|
||||
if offset_si111 is not None:
|
||||
self.crystal.offset_si111.put(offset_si111)
|
||||
if offset_si311 is not None:
|
||||
self.crystal.offset_si311.put(offset_si311)
|
||||
if d_spacing_si111 is not None:
|
||||
self.crystal.d_spacing_si111.put(d_spacing_si111)
|
||||
if d_spacing_si311 is not None:
|
||||
self.crystal.d_spacing_si311.put(d_spacing_si311)
|
||||
if xtal_enum == "111":
|
||||
crystal_set = 0
|
||||
elif xtal_enum == "311":
|
||||
crystal_set = 1
|
||||
else:
|
||||
raise ValueError(
|
||||
f"Invalid argument for xtal_enum : {xtal_enum}, choose from '111' or '311'"
|
||||
)
|
||||
self.crystal.xtal_enum.put(crystal_set)
|
||||
self.crystal.set_offset.put(1)
|
||||
61
debye_bec/devices/mo1_bragg/mo1_bragg_enums.py
Normal file
61
debye_bec/devices/mo1_bragg/mo1_bragg_enums.py
Normal file
@@ -0,0 +1,61 @@
|
||||
"""Enums for the Bragg positioner and trigger generator"""
|
||||
|
||||
import enum
|
||||
|
||||
|
||||
class TriggerControlSource(int, enum.Enum):
|
||||
"""Enum class for the trigger control source of the trigger generator"""
|
||||
|
||||
EPICS = 0
|
||||
INPOS = 1
|
||||
|
||||
|
||||
class TriggerControlMode(int, enum.Enum):
|
||||
"""Enum class for the trigger control mode of the trigger generator"""
|
||||
|
||||
PULSE = 0
|
||||
CONDITION = 1
|
||||
|
||||
|
||||
class ScanControlScanStatus(int, enum.Enum):
|
||||
"""Enum class for the scan status of the Bragg positioner"""
|
||||
|
||||
PARAMETER_WRONG = 0
|
||||
VALIDATION_PENDING = 1
|
||||
READY = 2
|
||||
RUNNING = 3
|
||||
|
||||
|
||||
class ScanControlLoadMessage(int, enum.Enum):
|
||||
"""Enum for validating messages for load message of the Bragg positioner"""
|
||||
|
||||
PENDING = 0
|
||||
STARTED = 1
|
||||
SUCCESS = 2
|
||||
ERR_TRIG_MEAS_LEN_LOW = 3
|
||||
ERR_TRIG_N_TRIGGERS_LOW = 4
|
||||
ERR_TRIG_TRIGS_EVERY_N_LOW = 5
|
||||
ERR_TRIG_MEAS_LEN_HI = 6
|
||||
ERR_TRIG_N_TRIGGERS_HI = 7
|
||||
ERR_TRIG_TRIGS_EVERY_N_HI = 8
|
||||
ERR_SCAN_HI_ANGLE_LIMIT = 9
|
||||
ERR_SCAN_LOW_ANGLE_LIMITS = 10
|
||||
ERR_SCAN_TIME = 11
|
||||
ERR_SCAN_VEL_TOO_HI = 12
|
||||
ERR_SCAN_ANGLE_OUT_OF_LIM = 13
|
||||
ERR_SCAN_HIGH_VEL_LAR_42 = 14
|
||||
ERR_SCAN_MODE_INVALID = 15
|
||||
|
||||
|
||||
class MoveType(str, enum.Enum):
|
||||
"""Enum class to switch between move types energy and angle for the Bragg positioner"""
|
||||
|
||||
ENERGY = "energy"
|
||||
ANGLE = "angle"
|
||||
|
||||
|
||||
class ScanControlMode(int, enum.Enum):
|
||||
"""Enum class for the scan control mode of the Bragg positioner"""
|
||||
|
||||
SIMPLE = 0
|
||||
ADVANCED = 1
|
||||
93
debye_bec/devices/mo1_bragg/mo1_bragg_utils.py
Normal file
93
debye_bec/devices/mo1_bragg/mo1_bragg_utils.py
Normal file
@@ -0,0 +1,93 @@
|
||||
"""Module for additional utils of the Mo1 Bragg Positioner"""
|
||||
|
||||
import numpy as np
|
||||
from scipy.interpolate import BSpline
|
||||
|
||||
################ Define Constants ############
|
||||
SAFETY_FACTOR = 0.025 # safety factor to limit acceleration -> NEVER SET TO ZERO !
|
||||
N_SAMPLES = 41 # number of samples to generate -> Always choose uneven number,
|
||||
# otherwise peak value will not be included
|
||||
DEGREE_SPLINE = 3 # DEGREE_SPLINE of spline, 3 works good
|
||||
TIME_COMPENSATE_SPLINE = 0.0062 # time to be compensated each spline in s
|
||||
POSITION_COMPONSATION = 0.02 # angle to add at both limits, must be same values
|
||||
# as used on ACS controller for simple scans
|
||||
|
||||
|
||||
class Mo1UtilsSplineError(Exception):
|
||||
"""Exception for spline computation"""
|
||||
|
||||
|
||||
def compute_spline(
|
||||
low_deg: float, high_deg: float, p_kink: float, e_kink_deg: float, scan_time: float
|
||||
) -> tuple[float, float, float]:
|
||||
"""Spline computation for the advanced scan mode
|
||||
|
||||
Args:
|
||||
low_deg (float): Low angle value of the scan in deg
|
||||
high_deg (float): High angle value of the scan in deg
|
||||
scan_time (float): Time for a half oscillation in s
|
||||
p_kink (float): Position of kink in %
|
||||
e_kink_deg (float): Position of kink in degree
|
||||
|
||||
Returns:
|
||||
tuple[float,float,float] : Position, Velocity and delta T arrays for the spline
|
||||
"""
|
||||
|
||||
# increase motion range slightly so that xas trigger signals will occur at defined energy limits
|
||||
low_deg = low_deg - POSITION_COMPONSATION
|
||||
high_deg = high_deg + POSITION_COMPONSATION
|
||||
|
||||
if not (0 <= p_kink <= 100):
|
||||
raise Mo1UtilsSplineError(
|
||||
"Kink position not within range of [0..100%]" + f"for p_kink: {p_kink}"
|
||||
)
|
||||
|
||||
if not (low_deg < e_kink_deg < high_deg):
|
||||
raise Mo1UtilsSplineError(
|
||||
"Kink energy not within selected energy range of scan,"
|
||||
+ f"for e_kink_deg {e_kink_deg}, low_deg {low_deg} and"
|
||||
+ f"high_deg {high_deg}."
|
||||
)
|
||||
|
||||
tc1 = SAFETY_FACTOR / scan_time * TIME_COMPENSATE_SPLINE
|
||||
t_kink = (scan_time - TIME_COMPENSATE_SPLINE - 2 * (SAFETY_FACTOR - tc1)) * p_kink / 100 + (
|
||||
SAFETY_FACTOR - tc1
|
||||
)
|
||||
|
||||
t_input = [
|
||||
0,
|
||||
SAFETY_FACTOR - tc1,
|
||||
t_kink,
|
||||
scan_time - TIME_COMPENSATE_SPLINE - SAFETY_FACTOR + tc1,
|
||||
scan_time - TIME_COMPENSATE_SPLINE,
|
||||
]
|
||||
p_input = [0, 0, e_kink_deg - low_deg, high_deg - low_deg, high_deg - low_deg]
|
||||
|
||||
cv = np.stack((t_input, p_input)).T # spline coefficients
|
||||
max_param = len(cv) - DEGREE_SPLINE
|
||||
kv = np.clip(np.arange(len(cv) + DEGREE_SPLINE + 1) - DEGREE_SPLINE, 0, max_param) # knots
|
||||
spl = BSpline(kv, cv, DEGREE_SPLINE) # get spline function
|
||||
p = spl(np.linspace(0, max_param, N_SAMPLES))
|
||||
v = spl(np.linspace(0, max_param, N_SAMPLES), 1)
|
||||
a = spl(np.linspace(0, max_param, N_SAMPLES), 2)
|
||||
j = spl(np.linspace(0, max_param, N_SAMPLES), 3)
|
||||
|
||||
tim, pos = p.T
|
||||
pos = pos + low_deg
|
||||
vel = v[:, 1] / v[:, 0]
|
||||
|
||||
acc = []
|
||||
for item in a:
|
||||
acc.append(0) if item[1] == 0 else acc.append(item[1] / item[0])
|
||||
jerk = []
|
||||
for item in j:
|
||||
jerk.append(0) if item[1] == 0 else jerk.append(item[1] / item[0])
|
||||
|
||||
dt = np.zeros(len(tim))
|
||||
for i in np.arange(len(tim)):
|
||||
if i == 0:
|
||||
dt[i] = 0
|
||||
else:
|
||||
dt[i] = 1000 * (tim[i] - tim[i - 1])
|
||||
|
||||
return pos, vel, dt
|
||||
0
debye_bec/devices/nidaq/__init__.py
Normal file
0
debye_bec/devices/nidaq/__init__.py
Normal file
661
debye_bec/devices/nidaq/nidaq.py
Normal file
661
debye_bec/devices/nidaq/nidaq.py
Normal file
@@ -0,0 +1,661 @@
|
||||
from __future__ import annotations
|
||||
|
||||
import time
|
||||
from typing import TYPE_CHECKING, Literal, cast
|
||||
|
||||
from bec_lib.logger import bec_logger
|
||||
from ophyd import Component as Cpt
|
||||
from ophyd import Device, DeviceStatus, EpicsSignal, EpicsSignalRO, Kind, StatusBase
|
||||
from ophyd.status import SubscriptionStatus, WaitTimeoutError
|
||||
from ophyd_devices.interfaces.base_classes.psi_device_base import PSIDeviceBase
|
||||
from ophyd_devices.sim.sim_signals import SetableSignal
|
||||
|
||||
from debye_bec.devices.nidaq.nidaq_enums import (
|
||||
EncoderTypes,
|
||||
NIDAQCompression,
|
||||
NidaqState,
|
||||
ReadoutRange,
|
||||
ScanRates,
|
||||
ScanType,
|
||||
)
|
||||
|
||||
if TYPE_CHECKING: # pragma: no cover
|
||||
from bec_lib.devicemanager import ScanInfo
|
||||
|
||||
logger = bec_logger.logger
|
||||
|
||||
|
||||
class NidaqError(Exception):
|
||||
"""Nidaq specific error"""
|
||||
|
||||
|
||||
class NidaqControl(Device):
|
||||
"""Nidaq control class with all PVs"""
|
||||
|
||||
### Readback PVs for EpicsEmitter ###
|
||||
ai0 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-AI0",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS analog input 0",
|
||||
auto_monitor=True,
|
||||
)
|
||||
ai1 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-AI1",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS analog input 1",
|
||||
auto_monitor=True,
|
||||
)
|
||||
ai2 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-AI2",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS analog input 2",
|
||||
auto_monitor=True,
|
||||
)
|
||||
ai3 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-AI3",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS analog input 3",
|
||||
auto_monitor=True,
|
||||
)
|
||||
ai4 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-AI4",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS analog input 4",
|
||||
auto_monitor=True,
|
||||
)
|
||||
ai5 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-AI5",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS analog input 5",
|
||||
auto_monitor=True,
|
||||
)
|
||||
ai6 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-AI6",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS analog input 6",
|
||||
auto_monitor=True,
|
||||
)
|
||||
ai7 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-AI7",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS analog input 7",
|
||||
auto_monitor=True,
|
||||
)
|
||||
|
||||
ci0 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-CI0",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS counter input 0",
|
||||
auto_monitor=True,
|
||||
)
|
||||
ci1 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-CI1",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS counter input 1",
|
||||
auto_monitor=True,
|
||||
)
|
||||
ci2 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-CI2",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS counter input 2",
|
||||
auto_monitor=True,
|
||||
)
|
||||
ci3 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-CI3",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS counter input 3",
|
||||
auto_monitor=True,
|
||||
)
|
||||
ci4 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-CI4",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS counter input 4",
|
||||
auto_monitor=True,
|
||||
)
|
||||
ci5 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-CI5",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS counter input 5",
|
||||
auto_monitor=True,
|
||||
)
|
||||
ci6 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-CI6",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS counter input 6",
|
||||
auto_monitor=True,
|
||||
)
|
||||
ci7 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-CI7",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS counter input 7",
|
||||
auto_monitor=True,
|
||||
)
|
||||
|
||||
di0 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-DI0",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS digital input 0",
|
||||
auto_monitor=True,
|
||||
)
|
||||
di1 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-DI1",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS digital input 1",
|
||||
auto_monitor=True,
|
||||
)
|
||||
di2 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-DI2",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS digital input 2",
|
||||
auto_monitor=True,
|
||||
)
|
||||
di3 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-DI3",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS digital input 3",
|
||||
auto_monitor=True,
|
||||
)
|
||||
di4 = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-DI4",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS digital input 4",
|
||||
auto_monitor=True,
|
||||
)
|
||||
|
||||
enc_epics = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-ENC",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS Encoder reading",
|
||||
auto_monitor=True,
|
||||
)
|
||||
|
||||
energy_epics = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="NIDAQ-ENERGY",
|
||||
kind=Kind.normal,
|
||||
doc="EPICS Energy reading",
|
||||
auto_monitor=True,
|
||||
)
|
||||
|
||||
### Readback for BEC emitter ###
|
||||
|
||||
ai0_mean = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream analog input 0, MEAN"
|
||||
)
|
||||
ai1_mean = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream analog input 1, MEAN"
|
||||
)
|
||||
ai2_mean = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream analog input 2, MEAN"
|
||||
)
|
||||
ai3_mean = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream analog input 3, MEAN"
|
||||
)
|
||||
ai4_mean = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream analog input 4, MEAN"
|
||||
)
|
||||
ai5_mean = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream analog input 5, MEAN"
|
||||
)
|
||||
ai6_mean = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream analog input 6, MEAN"
|
||||
)
|
||||
ai7_mean = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream analog input 7, MEAN"
|
||||
)
|
||||
|
||||
ai0_std_dev = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream analog input 0, STD"
|
||||
)
|
||||
ai1_std_dev = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream analog input 1, STD"
|
||||
)
|
||||
ai2_std_dev = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream analog input 2, STD"
|
||||
)
|
||||
ai3_std_dev = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream analog input 3, STD"
|
||||
)
|
||||
ai4_std_dev = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream analog input 4, STD"
|
||||
)
|
||||
ai5_std_dev = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream analog input 5, STD"
|
||||
)
|
||||
ai6_std_dev = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream analog input 6, STD"
|
||||
)
|
||||
ai7_std_dev = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream analog input 7, STD"
|
||||
)
|
||||
|
||||
ci0_mean = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream counter input 0, MEAN"
|
||||
)
|
||||
ci1_mean = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream counter input 1, MEAN"
|
||||
)
|
||||
ci2_mean = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream counter input 2, MEAN"
|
||||
)
|
||||
ci3_mean = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream counter input 3, MEAN"
|
||||
)
|
||||
ci4_mean = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream counter input 4, MEAN"
|
||||
)
|
||||
ci5_mean = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream counter input 5, MEAN"
|
||||
)
|
||||
ci6_mean = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream counter input 6, MEAN"
|
||||
)
|
||||
ci7_mean = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream counter input 7, MEAN"
|
||||
)
|
||||
|
||||
ci0_std_dev = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream counter input 0. STD"
|
||||
)
|
||||
ci1_std_dev = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream counter input 1. STD"
|
||||
)
|
||||
ci2_std_dev = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream counter input 2. STD"
|
||||
)
|
||||
ci3_std_dev = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream counter input 3. STD"
|
||||
)
|
||||
ci4_std_dev = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream counter input 4. STD"
|
||||
)
|
||||
ci5_std_dev = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream counter input 5. STD"
|
||||
)
|
||||
ci6_std_dev = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream counter input 6. STD"
|
||||
)
|
||||
ci7_std_dev = Cpt(
|
||||
SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream counter input 7. STD"
|
||||
)
|
||||
|
||||
di0_max = Cpt(SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream digital input 0, MAX")
|
||||
di1_max = Cpt(SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream digital input 1, MAX")
|
||||
di2_max = Cpt(SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream digital input 2, MAX")
|
||||
di3_max = Cpt(SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream digital input 3, MAX")
|
||||
di4_max = Cpt(SetableSignal, value=0, kind=Kind.normal, doc="NIDAQ stream digital input 4, MAX")
|
||||
|
||||
enc = Cpt(SetableSignal, value=0, kind=Kind.normal)
|
||||
energy = Cpt(SetableSignal, value=0, kind=Kind.normal)
|
||||
|
||||
### Control PVs ###
|
||||
|
||||
enable_compression = Cpt(EpicsSignal, suffix="NIDAQ-EnableRLE", kind=Kind.config)
|
||||
kickoff_call = Cpt(EpicsSignal, suffix="NIDAQ-Kickoff", kind=Kind.config)
|
||||
stage_call = Cpt(EpicsSignal, suffix="NIDAQ-Stage", kind=Kind.config)
|
||||
state = Cpt(EpicsSignal, suffix="NIDAQ-FSMState", kind=Kind.config, auto_monitor=True)
|
||||
server_status = Cpt(EpicsSignalRO, suffix="NIDAQ-ServerStatus", kind=Kind.config)
|
||||
compression_ratio = Cpt(EpicsSignalRO, suffix="NIDAQ-CompressionRatio", kind=Kind.config)
|
||||
scan_type = Cpt(EpicsSignal, suffix="NIDAQ-ScanType", kind=Kind.config)
|
||||
sampling_rate = Cpt(EpicsSignal, suffix="NIDAQ-SamplingRateRequested", kind=Kind.config)
|
||||
scan_duration = Cpt(EpicsSignal, suffix="NIDAQ-SamplingDuration", kind=Kind.config)
|
||||
readout_range = Cpt(EpicsSignal, suffix="NIDAQ-ReadoutRange", kind=Kind.config)
|
||||
encoder_type = Cpt(EpicsSignal, suffix="NIDAQ-EncoderType", kind=Kind.config)
|
||||
stop_call = Cpt(EpicsSignal, suffix="NIDAQ-Stop", kind=Kind.config)
|
||||
power = Cpt(EpicsSignal, suffix="NIDAQ-Power", kind=Kind.config)
|
||||
heartbeat = Cpt(EpicsSignal, suffix="NIDAQ-Heartbeat", kind=Kind.config, auto_monitor=True)
|
||||
time_left = Cpt(EpicsSignalRO, suffix="NIDAQ-TimeLeft", kind=Kind.config, auto_monitor=True)
|
||||
|
||||
ai_chans = Cpt(EpicsSignal, suffix="NIDAQ-AIChans", kind=Kind.config)
|
||||
ci_chans = Cpt(EpicsSignal, suffix="NIDAQ-CIChans6614", kind=Kind.config)
|
||||
di_chans = Cpt(EpicsSignal, suffix="NIDAQ-DIChans", kind=Kind.config)
|
||||
|
||||
|
||||
class Nidaq(PSIDeviceBase, NidaqControl):
|
||||
"""NIDAQ ophyd wrapper around the NIDAQ backend currently running at x01da-cons-05
|
||||
|
||||
Args:
|
||||
prefix (str) : Prefix to the NIDAQ soft ioc, currently X01DA-PC-SCANSERVER:
|
||||
name (str) : Name of the device
|
||||
scan_info (ScanInfo) : ScanInfo object passed by BEC's devicemanager.
|
||||
"""
|
||||
|
||||
USER_ACCESS = ["set_config"]
|
||||
|
||||
def __init__(self, prefix: str = "", *, name: str, scan_info: ScanInfo = None, **kwargs):
|
||||
super().__init__(name=name, prefix=prefix, scan_info=scan_info, **kwargs)
|
||||
self.scan_info: ScanInfo
|
||||
self.timeout_wait_for_signal = 5 # put 5s firsts
|
||||
self._timeout_wait_for_pv = 3 # 3s timeout for pv calls
|
||||
self.valid_scan_names = [
|
||||
"xas_simple_scan",
|
||||
"xas_simple_scan_with_xrd",
|
||||
"xas_advanced_scan",
|
||||
"xas_advanced_scan_with_xrd",
|
||||
"nidaq_continuous_scan",
|
||||
]
|
||||
|
||||
########################################
|
||||
# Beamline Methods #
|
||||
########################################
|
||||
|
||||
def _check_if_scan_name_is_valid(self) -> bool:
|
||||
"""Check if the scan is within the list of scans for which the backend is working"""
|
||||
scan_name = self.scan_info.msg.scan_name
|
||||
if scan_name in self.valid_scan_names:
|
||||
return True
|
||||
return False
|
||||
|
||||
def set_config(
|
||||
self,
|
||||
sampling_rate: Literal[
|
||||
100000, 500000, 1000000, 2000000, 4000000, 5000000, 10000000, 14286000
|
||||
],
|
||||
ai: list,
|
||||
ci: list,
|
||||
di: list,
|
||||
scan_type: Literal["continuous", "triggered"] = "triggered",
|
||||
scan_duration: float = 0,
|
||||
readout_range: Literal[1, 2, 5, 10] = 10,
|
||||
encoder_type: Literal["X_1", "X_2", "X_4"] = "X_4",
|
||||
enable_compression: bool = True,
|
||||
) -> None:
|
||||
"""Method to configure the NIDAQ
|
||||
|
||||
Args:
|
||||
sampling_rate(Literal[100000, 500000, 1000000, 2000000, 4000000, 5000000,
|
||||
10000000, 14286000]): Sampling rate in Hz
|
||||
ai(list): List of analog input channel numbers to add, i.e. [0, 1, 2] for
|
||||
input 0, 1 and 2
|
||||
ci(list): List of counter input channel numbers to add, i.e. [0, 1, 2] for
|
||||
input 0, 1 and 2
|
||||
di(list): List of digital input channel numbers to add, i.e. [0, 1, 2] for
|
||||
input 0, 1 and 2
|
||||
scan_type(Literal['continuous', 'triggered']): Triggered to use with monochromator,
|
||||
otherwise continuous, default 'triggered'
|
||||
scan_duration(float): Scan duration in seconds, use 0 for infinite scan, default 0
|
||||
readout_range(Literal[1, 2, 5, 10]): Readout range in +- Volts, default +-10V
|
||||
encoder_type(Literal['X_1', 'X_2', 'X_4']): Encoder readout type, default 'X_4'
|
||||
enable_compression(bool): Enable or disable compression of data, default True
|
||||
|
||||
"""
|
||||
if sampling_rate == 100000:
|
||||
self.sampling_rate.put(ScanRates.HUNDRED_KHZ)
|
||||
elif sampling_rate == 500000:
|
||||
self.sampling_rate.put(ScanRates.FIVE_HUNDRED_KHZ)
|
||||
elif sampling_rate == 1000000:
|
||||
self.sampling_rate.put(ScanRates.ONE_MHZ)
|
||||
elif sampling_rate == 2000000:
|
||||
self.sampling_rate.put(ScanRates.TWO_MHZ)
|
||||
elif sampling_rate == 4000000:
|
||||
self.sampling_rate.put(ScanRates.FOUR_MHZ)
|
||||
elif sampling_rate == 5000000:
|
||||
self.sampling_rate.put(ScanRates.FIVE_MHZ)
|
||||
elif sampling_rate == 10000000:
|
||||
self.sampling_rate.put(ScanRates.TEN_MHZ)
|
||||
elif sampling_rate == 14286000:
|
||||
self.sampling_rate.put(ScanRates.FOURTEEN_THREE_MHZ)
|
||||
|
||||
ai_chans = 0
|
||||
if isinstance(ai, list):
|
||||
for ch in ai:
|
||||
if isinstance(ch, int):
|
||||
if ch >= 0 and ch <= 7:
|
||||
ai_chans = ai_chans | (1 << ch)
|
||||
self.ai_chans.put(ai_chans)
|
||||
|
||||
ci_chans = 0
|
||||
if isinstance(ci, list):
|
||||
for ch in ci:
|
||||
if isinstance(ch, int):
|
||||
if ch >= 0 and ch <= 7:
|
||||
ci_chans = ci_chans | (1 << ch)
|
||||
self.ci_chans.put(ci_chans)
|
||||
|
||||
di_chans = 0
|
||||
if isinstance(di, list):
|
||||
for ch in di:
|
||||
if isinstance(ch, int):
|
||||
if ch >= 0 and ch <= 4:
|
||||
di_chans = di_chans | (1 << ch)
|
||||
self.di_chans.put(di_chans)
|
||||
|
||||
if scan_type in "continuous":
|
||||
self.scan_type.put(ScanType.CONTINUOUS)
|
||||
elif scan_type in "triggered":
|
||||
self.scan_type.put(ScanType.TRIGGERED)
|
||||
|
||||
if scan_duration >= 0:
|
||||
self.scan_duration.put(scan_duration)
|
||||
|
||||
if readout_range == 1:
|
||||
self.readout_range.put(ReadoutRange.ONE_V)
|
||||
elif readout_range == 2:
|
||||
self.readout_range.put(ReadoutRange.TWO_V)
|
||||
elif readout_range == 5:
|
||||
self.readout_range.put(ReadoutRange.FIVE_V)
|
||||
elif readout_range == 10:
|
||||
self.readout_range.put(ReadoutRange.TEN_V)
|
||||
|
||||
if encoder_type in "X_1":
|
||||
self.encoder_type.put(EncoderTypes.X_1)
|
||||
elif encoder_type in "X_2":
|
||||
self.encoder_type.put(EncoderTypes.X_2)
|
||||
elif encoder_type in "X_4":
|
||||
self.encoder_type.put(EncoderTypes.X_4)
|
||||
|
||||
if enable_compression is True:
|
||||
self.enable_compression.put(NIDAQCompression.ON)
|
||||
elif enable_compression is False:
|
||||
self.enable_compression.put(NIDAQCompression.OFF)
|
||||
|
||||
########################################
|
||||
# Beamline Specific Implementations #
|
||||
########################################
|
||||
|
||||
def on_init(self) -> None:
|
||||
"""
|
||||
Called when the device is initialized.
|
||||
|
||||
No signals are connected at this point. If you like to
|
||||
set default values on signals, please use on_connected instead.
|
||||
"""
|
||||
|
||||
def on_connected(self) -> None:
|
||||
"""
|
||||
Called after the device is connected and its signals are connected.
|
||||
Default values for signals should be set here.
|
||||
"""
|
||||
|
||||
def heartbeat_callback(*, old_value, value, **kwargs):
|
||||
return ((old_value) == 0 and (value == 1)) or ((old_value) == 1 and (value == 0))
|
||||
|
||||
status = SubscriptionStatus(self.heartbeat, callback=heartbeat_callback)
|
||||
try:
|
||||
status.wait(timeout=self.timeout_wait_for_signal) # Raises if timeout is reached
|
||||
except WaitTimeoutError:
|
||||
self.power.put(1)
|
||||
|
||||
status.wait(timeout=self.timeout_wait_for_signal)
|
||||
|
||||
if not self.wait_for_condition(
|
||||
condition=lambda: self.state.get() == NidaqState.STANDBY,
|
||||
timeout=self.timeout_wait_for_signal,
|
||||
check_stopped=True,
|
||||
):
|
||||
raise NidaqError(
|
||||
f"Device {self.name} has not been reached in state STANDBY, current state {NidaqState(self.state.get())}"
|
||||
)
|
||||
self.scan_duration.set(0).wait(timeout=self._timeout_wait_for_pv)
|
||||
self.time_left.subscribe(self._progress_update, run=False)
|
||||
|
||||
def on_stage(self) -> DeviceStatus | StatusBase | None:
|
||||
"""
|
||||
Called while staging the device.
|
||||
|
||||
Information about the upcoming scan can be accessed from the scan_info (self.scan_info.msg) object.
|
||||
If the upcoming scan is not in the list of valid scans, return immediately.
|
||||
"""
|
||||
if not self._check_if_scan_name_is_valid():
|
||||
return None
|
||||
|
||||
if not self.wait_for_condition(
|
||||
condition=lambda: self.state.get() == NidaqState.STANDBY,
|
||||
timeout=self.timeout_wait_for_signal,
|
||||
check_stopped=True,
|
||||
):
|
||||
raise NidaqError(
|
||||
f"Device {self.name} has not been reached in state STANDBY, current state {NidaqState(self.state.get())}"
|
||||
)
|
||||
# If scan is not part of the valid_scan_names,
|
||||
if self.scan_info.msg.scan_name != "nidaq_continuous_scan":
|
||||
self.scan_type.set(ScanType.TRIGGERED).wait(timeout=self._timeout_wait_for_pv)
|
||||
self.scan_duration.set(0).wait(timeout=self._timeout_wait_for_pv)
|
||||
self.enable_compression.set(1).wait(timeout=self._timeout_wait_for_pv)
|
||||
else:
|
||||
self.scan_type.set(ScanType.CONTINUOUS).wait(timeout=self._timeout_wait_for_pv)
|
||||
self.scan_duration.set(self.scan_info.msg.scan_parameters["scan_duration"]).wait(
|
||||
timeout=self._timeout_wait_for_pv
|
||||
)
|
||||
self.enable_compression.set(self.scan_info.msg.scan_parameters["compression"]).wait(
|
||||
timeout=self._timeout_wait_for_pv
|
||||
)
|
||||
|
||||
self.stage_call.set(1).wait(timeout=self._timeout_wait_for_pv)
|
||||
|
||||
if not self.wait_for_condition(
|
||||
condition=lambda: self.state.get() == NidaqState.STAGE,
|
||||
timeout=self.timeout_wait_for_signal,
|
||||
check_stopped=True,
|
||||
):
|
||||
raise NidaqError(
|
||||
f"Device {self.name} has not been reached in state STAGE, current state {NidaqState(self.state.get())}"
|
||||
)
|
||||
if self.scan_info.msg.scan_name != "nidaq_continuous_scan":
|
||||
status = self.on_kickoff()
|
||||
status.wait(timeout=self._timeout_wait_for_pv)
|
||||
logger.info(f"Device {self.name} was staged: {NidaqState(self.state.get())}")
|
||||
|
||||
def on_kickoff(self) -> DeviceStatus | StatusBase:
|
||||
"""Kickoff the Nidaq"""
|
||||
status = self.kickoff_call.set(1)
|
||||
return status
|
||||
|
||||
def on_unstage(self) -> DeviceStatus | StatusBase | None:
|
||||
"""Called while unstaging the device. Check that the Nidaq goes into Standby"""
|
||||
|
||||
def _get_state():
|
||||
return self.state.get() == NidaqState.STANDBY
|
||||
|
||||
# TODO We need to wait longer if rle is disabled
|
||||
if not self.wait_for_condition(
|
||||
condition=_get_state, timeout=self.timeout_wait_for_signal, check_stopped=False
|
||||
):
|
||||
raise NidaqError(
|
||||
f"Device {self.name} has not been reached in state STANDBY, current state {NidaqState(self.state.get())}"
|
||||
)
|
||||
self.enable_compression.set(1).wait(self._timeout_wait_for_pv)
|
||||
logger.info(f"Device {self.name} was unstaged: {NidaqState(self.state.get())}")
|
||||
|
||||
def on_pre_scan(self) -> DeviceStatus | StatusBase | None:
|
||||
"""
|
||||
Called right before the scan starts on all devices automatically.
|
||||
|
||||
Here we ensure that the NIDAQ master task is running
|
||||
before the motor starts its oscillation. This is needed for being properly homed.
|
||||
The NIDAQ should go into Acquiring mode.
|
||||
"""
|
||||
if not self._check_if_scan_name_is_valid():
|
||||
return None
|
||||
|
||||
if self.scan_info.msg.scan_name == "nidaq_continuous_scan":
|
||||
logger.info(f"Device {self.name} ready to be kicked off for nidaq_continuous_scan")
|
||||
return None
|
||||
|
||||
def _wait_for_state():
|
||||
return self.state.get() == NidaqState.KICKOFF
|
||||
|
||||
if not self.wait_for_condition(
|
||||
_wait_for_state, timeout=self.timeout_wait_for_signal, check_stopped=True
|
||||
):
|
||||
raise NidaqError(
|
||||
f"Device {self.name} failed to reach state KICKOFF during pre scan, current state {NidaqState(self.state.get())}"
|
||||
)
|
||||
logger.info(
|
||||
f"Device {self.name} ready to take data after pre_scan: {NidaqState(self.state.get())}"
|
||||
)
|
||||
|
||||
def on_trigger(self) -> DeviceStatus | StatusBase | None:
|
||||
"""Called when the device is triggered."""
|
||||
|
||||
def on_complete(self) -> DeviceStatus | StatusBase | None:
|
||||
"""
|
||||
Called to inquire if a device has completed a scans.
|
||||
|
||||
For the NIDAQ we use this method to stop the backend since it
|
||||
would not stop by itself in its current implementation since the number of points are not predefined.
|
||||
"""
|
||||
if not self._check_if_scan_name_is_valid():
|
||||
return None
|
||||
|
||||
def _check_state(self) -> bool:
|
||||
while True:
|
||||
if self.stopped is True:
|
||||
raise NidaqError(f"Device {self.name} was stopped")
|
||||
if self.state.get() == NidaqState.STANDBY:
|
||||
return
|
||||
# if time.time() > timeout_time:
|
||||
# raise TimeoutError(f"Device {self.name} ran into timeout")
|
||||
time.sleep(0.1)
|
||||
|
||||
if self.scan_info.msg.scan_name != "nidaq_continuous_scan":
|
||||
self.on_stop()
|
||||
status = self.task_handler.submit_task(task=_check_state, task_args=(self,))
|
||||
else:
|
||||
status = self.task_handler.submit_task(task=_check_state, task_args=(self,))
|
||||
return status
|
||||
|
||||
def _progress_update(self, value, **kwargs) -> None:
|
||||
"""Callback method to update the scan progress, runs a callback
|
||||
to SUB_PROGRESS subscribers, i.e. BEC.
|
||||
|
||||
Args:
|
||||
value (int) : current progress value
|
||||
"""
|
||||
scan_duration = self.scan_info.msg.scan_parameters.get("scan_duration", None)
|
||||
if not isinstance(scan_duration, (int, float)):
|
||||
return
|
||||
value = scan_duration - value
|
||||
max_value = scan_duration
|
||||
self._run_subs(
|
||||
sub_type=self.SUB_PROGRESS,
|
||||
value=value,
|
||||
max_value=max_value,
|
||||
done=bool(value == max_value),
|
||||
)
|
||||
|
||||
def on_stop(self) -> None:
|
||||
"""Called when the device is stopped."""
|
||||
self.stop_call.put(1)
|
||||
56
debye_bec/devices/nidaq/nidaq_enums.py
Normal file
56
debye_bec/devices/nidaq/nidaq_enums.py
Normal file
@@ -0,0 +1,56 @@
|
||||
import enum
|
||||
|
||||
|
||||
class NIDAQCompression(str, enum.Enum):
|
||||
"""Options for Compression"""
|
||||
|
||||
OFF = 0
|
||||
ON = 1
|
||||
|
||||
|
||||
class ScanType(int, enum.Enum):
|
||||
"""Triggering options of the backend"""
|
||||
|
||||
TRIGGERED = 0
|
||||
CONTINUOUS = 1
|
||||
|
||||
|
||||
class NidaqState(int, enum.Enum):
|
||||
"""Possible States of the NIDAQ backend"""
|
||||
|
||||
DISABLED = 0
|
||||
STANDBY = 1
|
||||
STAGE = 2
|
||||
KICKOFF = 3
|
||||
ACQUIRE = 4
|
||||
UNSTAGE = 5
|
||||
|
||||
|
||||
class ScanRates(int, enum.Enum):
|
||||
"""Sampling Rate options for the backend, in kHZ and MHz"""
|
||||
|
||||
HUNDRED_KHZ = 0
|
||||
FIVE_HUNDRED_KHZ = 1
|
||||
ONE_MHZ = 2
|
||||
TWO_MHZ = 3
|
||||
FOUR_MHZ = 4
|
||||
FIVE_MHZ = 5
|
||||
TEN_MHZ = 6
|
||||
FOURTEEN_THREE_MHZ = 7
|
||||
|
||||
|
||||
class ReadoutRange(int, enum.Enum):
|
||||
"""ReadoutRange in +-V"""
|
||||
|
||||
ONE_V = 0
|
||||
TWO_V = 1
|
||||
FIVE_V = 2
|
||||
TEN_V = 3
|
||||
|
||||
|
||||
class EncoderTypes(int, enum.Enum):
|
||||
"""Encoder Types"""
|
||||
|
||||
X_1 = 0
|
||||
X_2 = 1
|
||||
X_4 = 2
|
||||
75
debye_bec/devices/pilatus_curtain.py
Normal file
75
debye_bec/devices/pilatus_curtain.py
Normal file
@@ -0,0 +1,75 @@
|
||||
"""ES2 Pilatus Curtain"""
|
||||
|
||||
import time
|
||||
|
||||
from ophyd import Component as Cpt
|
||||
from ophyd import Device, EpicsSignal, EpicsSignalRO, Kind
|
||||
from ophyd_devices.utils import bec_utils
|
||||
|
||||
|
||||
class GasMixSetup(Device):
|
||||
"""Class for the ES2 Pilatus Curtain"""
|
||||
|
||||
USER_ACCESS = ["open", "close"]
|
||||
|
||||
open_cover = Cpt(EpicsSignal, suffix="OpenCover", kind="config", doc="Open Cover")
|
||||
close_cover = Cpt(EpicsSignal, suffix="CloseCover", kind="config", doc="Close Cover")
|
||||
cover_is_closed = Cpt(
|
||||
EpicsSignalRO, suffix="CoverIsClosed", kind="config", doc="Cover is closed"
|
||||
)
|
||||
cover_is_open = Cpt(EpicsSignalRO, suffix="CoverIsOpen", kind="config", doc="Cover is open")
|
||||
cover_is_moving = Cpt(
|
||||
EpicsSignalRO, suffix="CoverIsMoving", kind="config", doc="Cover is moving"
|
||||
)
|
||||
cover_error = Cpt(EpicsSignalRO, suffix="CoverError", kind="config", doc="Cover error")
|
||||
|
||||
def __init__(
|
||||
self, prefix="", *, name: str, kind: Kind = None, device_manager=None, parent=None, **kwargs
|
||||
):
|
||||
"""Initialize the Pilatus Curtain.
|
||||
|
||||
Args:
|
||||
prefix (str): EPICS prefix for the device
|
||||
name (str): Name of the device
|
||||
kind (Kind): Kind of the device
|
||||
device_manager (DeviceManager): Device manager instance
|
||||
parent (Device): Parent device
|
||||
kwargs: Additional keyword arguments
|
||||
"""
|
||||
super().__init__(prefix, name=name, kind=kind, parent=parent, **kwargs)
|
||||
self.device_manager = device_manager
|
||||
self.service_cfg = None
|
||||
|
||||
self.timeout_for_pvwait = 30
|
||||
self.readback.name = self.name
|
||||
# Wait for connection on all components, ensure IOC is connected
|
||||
self.wait_for_connection(all_signals=True, timeout=5)
|
||||
|
||||
if device_manager:
|
||||
self.device_manager = device_manager
|
||||
else:
|
||||
self.device_manager = bec_utils.DMMock()
|
||||
|
||||
self.connector = self.device_manager.connector
|
||||
|
||||
def open(self) -> None:
|
||||
"""Open the cover"""
|
||||
|
||||
self.open_cover.put(1)
|
||||
|
||||
while not self.cover_is_open.get():
|
||||
time.sleep(0.1)
|
||||
if self.cover_error.get():
|
||||
raise TimeoutError("Curtain did not open successfully and is now in an error state")
|
||||
|
||||
def close(self) -> None:
|
||||
"""Close the cover"""
|
||||
|
||||
self.close_cover.put(1)
|
||||
|
||||
while not self.cover_is_closed.get():
|
||||
time.sleep(0.1)
|
||||
if self.cover_error.get():
|
||||
raise TimeoutError(
|
||||
"Curtain did not close successfully and is now in an error state"
|
||||
)
|
||||
194
debye_bec/devices/reffoilchanger.py
Normal file
194
debye_bec/devices/reffoilchanger.py
Normal file
@@ -0,0 +1,194 @@
|
||||
"""ES2 Reference Foil Changer"""
|
||||
|
||||
from __future__ import annotations
|
||||
|
||||
import enum
|
||||
from typing import TYPE_CHECKING
|
||||
|
||||
from ophyd import Component as Cpt
|
||||
from ophyd import EpicsSignal, EpicsSignalRO, EpicsSignalWithRBV
|
||||
from ophyd.status import DeviceStatus
|
||||
from ophyd_devices.interfaces.base_classes.psi_device_base import PSIDeviceBase
|
||||
from ophyd_devices.utils.errors import DeviceStopError
|
||||
|
||||
if TYPE_CHECKING:
|
||||
from bec_lib.devicemanager import ScanInfo
|
||||
|
||||
|
||||
class Status(int, enum.Enum):
|
||||
"""Enum class for the status field"""
|
||||
|
||||
BOOT = 0
|
||||
RETRACTED = 1
|
||||
INSERTED = 2
|
||||
MOVING = 3
|
||||
ERROR = 4
|
||||
|
||||
|
||||
class OpMode(int, enum.Enum):
|
||||
"""Enum class for the Operating Mode field"""
|
||||
|
||||
USERMODE = 0
|
||||
MAINTENANCEMODE = 1
|
||||
DIAGNOSTICMODE = 2
|
||||
ERRORMODE = 3
|
||||
|
||||
|
||||
class Reffoilchanger(PSIDeviceBase):
|
||||
"""Class for the ES2 Reference Foil Changer"""
|
||||
|
||||
USER_ACCESS = ["insert"]
|
||||
|
||||
inserted = Cpt(
|
||||
EpicsSignalRO, suffix="ES2-REF:TRY-FilterInserted", kind="config", doc="Inserted indicator"
|
||||
)
|
||||
retracted = Cpt(
|
||||
EpicsSignalRO,
|
||||
suffix="ES2-REF:TRY-FilterRetracted",
|
||||
kind="config",
|
||||
doc="Retracted indicator",
|
||||
)
|
||||
moving = Cpt(EpicsSignalRO, suffix="ES2-REF:ROTY.MOVN", kind="config", doc="Moving indicator")
|
||||
status = Cpt(
|
||||
EpicsSignal, suffix="ES2-REF:SELN-FilterState-ENUM_RBV", kind="config", doc="Status"
|
||||
)
|
||||
op_mode = Cpt(
|
||||
EpicsSignalWithRBV, suffix="ES2-REF:SELN-OpMode-ENUM", kind="config", doc="Status"
|
||||
)
|
||||
ref_set = Cpt(EpicsSignal, suffix="ES2-REF:SELN-SET", kind="config", doc="Requested reference")
|
||||
ref_rb = Cpt(
|
||||
EpicsSignalRO, suffix="ES2-REF:SELN-RB", kind="config", doc="Currently set reference"
|
||||
)
|
||||
|
||||
foil01 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL01.DESC", kind="config", doc="Foil 01")
|
||||
foil02 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL02.DESC", kind="config", doc="Foil 02")
|
||||
foil03 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL03.DESC", kind="config", doc="Foil 03")
|
||||
foil04 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL04.DESC", kind="config", doc="Foil 04")
|
||||
foil05 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL05.DESC", kind="config", doc="Foil 05")
|
||||
foil06 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL06.DESC", kind="config", doc="Foil 06")
|
||||
foil07 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL07.DESC", kind="config", doc="Foil 07")
|
||||
foil08 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL08.DESC", kind="config", doc="Foil 08")
|
||||
foil09 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL09.DESC", kind="config", doc="Foil 09")
|
||||
foil10 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL10.DESC", kind="config", doc="Foil 10")
|
||||
foil11 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL11.DESC", kind="config", doc="Foil 11")
|
||||
foil12 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL12.DESC", kind="config", doc="Foil 12")
|
||||
foil13 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL13.DESC", kind="config", doc="Foil 13")
|
||||
foil14 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL14.DESC", kind="config", doc="Foil 14")
|
||||
foil15 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL15.DESC", kind="config", doc="Foil 15")
|
||||
foil16 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL16.DESC", kind="config", doc="Foil 16")
|
||||
foil17 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL17.DESC", kind="config", doc="Foil 17")
|
||||
foil18 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL18.DESC", kind="config", doc="Foil 18")
|
||||
foil19 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL19.DESC", kind="config", doc="Foil 19")
|
||||
foil20 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL20.DESC", kind="config", doc="Foil 20")
|
||||
foil21 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL21.DESC", kind="config", doc="Foil 21")
|
||||
foil22 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL22.DESC", kind="config", doc="Foil 22")
|
||||
foil23 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL23.DESC", kind="config", doc="Foil 23")
|
||||
foil24 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL24.DESC", kind="config", doc="Foil 24")
|
||||
foil25 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL25.DESC", kind="config", doc="Foil 25")
|
||||
foil26 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL26.DESC", kind="config", doc="Foil 26")
|
||||
foil27 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL27.DESC", kind="config", doc="Foil 27")
|
||||
foil28 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL28.DESC", kind="config", doc="Foil 28")
|
||||
foil29 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL29.DESC", kind="config", doc="Foil 29")
|
||||
foil30 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL30.DESC", kind="config", doc="Foil 30")
|
||||
foil31 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL31.DESC", kind="config", doc="Foil 31")
|
||||
foil32 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL32.DESC", kind="config", doc="Foil 32")
|
||||
foil33 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL33.DESC", kind="config", doc="Foil 33")
|
||||
foil34 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL34.DESC", kind="config", doc="Foil 34")
|
||||
foil35 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL35.DESC", kind="config", doc="Foil 35")
|
||||
foil36 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL36.DESC", kind="config", doc="Foil 36")
|
||||
foil37 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL37.DESC", kind="config", doc="Foil 37")
|
||||
foil38 = Cpt(EpicsSignalRO, suffix="ES-REFFOIL:FOIL38.DESC", kind="config", doc="Foil 38")
|
||||
|
||||
def __init__(self, *, name: str, prefix: str = "", scan_info: ScanInfo | None = None, **kwargs):
|
||||
super().__init__(name=name, prefix=prefix, scan_info=scan_info, **kwargs)
|
||||
|
||||
self.foils = [
|
||||
self.foil01,
|
||||
self.foil02,
|
||||
self.foil03,
|
||||
self.foil04,
|
||||
self.foil05,
|
||||
self.foil06,
|
||||
self.foil07,
|
||||
self.foil08,
|
||||
self.foil09,
|
||||
self.foil10,
|
||||
self.foil11,
|
||||
self.foil12,
|
||||
self.foil13,
|
||||
self.foil14,
|
||||
self.foil15,
|
||||
self.foil16,
|
||||
self.foil17,
|
||||
self.foil18,
|
||||
self.foil19,
|
||||
self.foil20,
|
||||
self.foil21,
|
||||
self.foil22,
|
||||
self.foil23,
|
||||
self.foil24,
|
||||
self.foil25,
|
||||
self.foil26,
|
||||
self.foil27,
|
||||
self.foil28,
|
||||
self.foil29,
|
||||
self.foil30,
|
||||
self.foil31,
|
||||
self.foil32,
|
||||
self.foil33,
|
||||
self.foil34,
|
||||
self.foil35,
|
||||
self.foil36,
|
||||
self.foil37,
|
||||
self.foil38,
|
||||
]
|
||||
|
||||
def insert(self, ref: str, wait: bool = False) -> DeviceStatus:
|
||||
"""Insert a reference
|
||||
|
||||
Args:
|
||||
ref (str) : Desired reference foil name, e.g. Fe or Pt
|
||||
wait (bool): If you like to wait for the filling to finish. Default False.
|
||||
"""
|
||||
|
||||
filter_number = -1
|
||||
for i, foil in enumerate(self.foils):
|
||||
if foil.get() == ref:
|
||||
filter_number = i + 1
|
||||
break
|
||||
if filter_number == -1:
|
||||
raise ValueError(f"Requested foil ({ref}) is not in list of available foils")
|
||||
|
||||
if self.op_mode.get() == OpMode.USERMODE:
|
||||
self.ref_set.put(filter_number)
|
||||
|
||||
def wait_for_status():
|
||||
return (
|
||||
(self.status.get() == Status.RETRACTED)
|
||||
or (self.status.get() == Status.MOVING)
|
||||
or (
|
||||
self.ref_rb.get() < (filter_number + 0.2)
|
||||
and self.ref_rb.get() > (filter_number - 0.2)
|
||||
)
|
||||
)
|
||||
|
||||
timeout = 3
|
||||
if not self.wait_for_condition(wait_for_status, timeout=timeout, check_stopped=True):
|
||||
raise TimeoutError(
|
||||
f"Reference foil changer did not retract the current foil within {timeout}s"
|
||||
)
|
||||
|
||||
def wait_for_change_finished():
|
||||
return self.status.get() == Status.INSERTED and self.op_mode == OpMode.USERMODE
|
||||
|
||||
# Wait until new reference foil is inserted
|
||||
status = self.task_handler.submit_task(
|
||||
task=self.wait_for_condition, task_args=(wait_for_change_finished, 5, True)
|
||||
)
|
||||
if wait:
|
||||
status.wait()
|
||||
return status
|
||||
else:
|
||||
raise DeviceStopError(
|
||||
f"Reference foil changer must be in User Mode but is in {self.op_mode.get(as_string=True)}"
|
||||
)
|
||||
9
debye_bec/devices/test_utils/utils.py
Normal file
9
debye_bec/devices/test_utils/utils.py
Normal file
@@ -0,0 +1,9 @@
|
||||
def patch_dual_pvs(device):
|
||||
device.wait_for_connection(all_signals=True)
|
||||
for walk in device.walk_signals():
|
||||
if not hasattr(walk.item, "_read_pv"):
|
||||
continue
|
||||
if not hasattr(walk.item, "_write_pv"):
|
||||
continue
|
||||
if walk.item._read_pv.pvname.endswith("_RBV"):
|
||||
walk.item._read_pv = walk.item._write_pv
|
||||
1
debye_bec/file_writer/__init__.py
Normal file
1
debye_bec/file_writer/__init__.py
Normal file
@@ -0,0 +1 @@
|
||||
from .debye_nexus_structure import DebyeNexusStructure
|
||||
26
debye_bec/file_writer/debye_nexus_structure.py
Normal file
26
debye_bec/file_writer/debye_nexus_structure.py
Normal file
@@ -0,0 +1,26 @@
|
||||
from bec_server.file_writer.default_writer import DefaultFormat
|
||||
|
||||
class DebyeNexusStructure(DefaultFormat):
|
||||
""" Nexus Structure for Debye"""
|
||||
|
||||
def format(self) -> None:
|
||||
""" Specify the file format for the file writer."""
|
||||
|
||||
entry = self.storage.create_group(name="entry")
|
||||
entry.attrs["NX_class"] = "NXentry"
|
||||
instrument = entry.create_group(name="instrument")
|
||||
instrument.attrs["NX_class"] = "NXinstrument"
|
||||
monochromator = instrument.create_group(name="monochromator")
|
||||
# monochromator.attrs["NX_class"] = "NXmonochromator" -> to be checked
|
||||
crystal = monochromator.create_group(name="crystal")
|
||||
|
||||
###################
|
||||
## mo1_bragg specific information
|
||||
###################
|
||||
|
||||
# Logic if device exist
|
||||
if "mo_trx" in self.device_manager.devices:
|
||||
# Create a softlink
|
||||
chemical_formular = crystal.create_soft_link(name="chemical_formular", target="/entry/collection/devices/mo_trx/mo_trx")
|
||||
chemical_formular.attrs["NX_class"] = "NXdata"
|
||||
|
||||
7
debye_bec/scans/__init__.py
Normal file
7
debye_bec/scans/__init__.py
Normal file
@@ -0,0 +1,7 @@
|
||||
from .mono_bragg_scans import (
|
||||
XASAdvancedScan,
|
||||
XASAdvancedScanWithXRD,
|
||||
XASSimpleScan,
|
||||
XASSimpleScanWithXRD,
|
||||
)
|
||||
from .nidaq_cont_scan import NIDAQContinuousScan
|
||||
0
debye_bec/scans/metadata_schema/__init__.py
Normal file
0
debye_bec/scans/metadata_schema/__init__.py
Normal file
12
debye_bec/scans/metadata_schema/metadata_schema_registry.py
Normal file
12
debye_bec/scans/metadata_schema/metadata_schema_registry.py
Normal file
@@ -0,0 +1,12 @@
|
||||
# from .metadata_schema_template import ExampleSchema
|
||||
|
||||
METADATA_SCHEMA_REGISTRY = {
|
||||
# Add models which should be used to validate scan metadata here.
|
||||
# Make a model according to the template, and import it as above
|
||||
# Then associate it with a scan like so:
|
||||
# "example_scan": ExampleSchema
|
||||
}
|
||||
|
||||
# Define a default schema type which should be used as the fallback for everything:
|
||||
|
||||
DEFAULT_SCHEMA = None
|
||||
34
debye_bec/scans/metadata_schema/metadata_schema_template.py
Normal file
34
debye_bec/scans/metadata_schema/metadata_schema_template.py
Normal file
@@ -0,0 +1,34 @@
|
||||
# # By inheriting from BasicScanMetadata you can define a schema by which metadata
|
||||
# # supplied to a scan must be validated.
|
||||
# # This schema is a Pydantic model: https://docs.pydantic.dev/latest/concepts/models/
|
||||
# # but by default it will still allow you to add any arbitrary information to it.
|
||||
# # That is to say, when you run a scan with which such a model has been associated in the
|
||||
# # metadata_schema_registry, you can supply any python dictionary with strings as keys
|
||||
# # and built-in python types (strings, integers, floats) as values, and these will be
|
||||
# # added to the experiment metadata, but it *must* contain the keys and values of the
|
||||
# # types defined in the schema class.
|
||||
# #
|
||||
# #
|
||||
# # For example, say that you would like to enforce recording information about sample
|
||||
# # pretreatment, you could define the following:
|
||||
# #
|
||||
#
|
||||
# from bec_lib.metadata_schema import BasicScanMetadata
|
||||
#
|
||||
#
|
||||
# class ExampleSchema(BasicScanMetadata):
|
||||
# treatment_description: str
|
||||
# treatment_temperature_k: int
|
||||
#
|
||||
#
|
||||
# # If this was used according to the example in metadata_schema_registry.py,
|
||||
# # then when calling the scan, the user would need to write something like:
|
||||
# >>> scans.example_scan(
|
||||
# >>> motor,
|
||||
# >>> 1,
|
||||
# >>> 2,
|
||||
# >>> 3,
|
||||
# >>> metadata={"treatment_description": "oven overnight", "treatment_temperature_k": 575},
|
||||
# >>> )
|
||||
#
|
||||
# # And the additional metadata would be saved in the HDF5 file created for the scan.
|
||||
308
debye_bec/scans/mono_bragg_scans.py
Normal file
308
debye_bec/scans/mono_bragg_scans.py
Normal file
@@ -0,0 +1,308 @@
|
||||
"""This module contains the scan classes for the mono bragg motor of the Debye beamline."""
|
||||
|
||||
import time
|
||||
from typing import Literal
|
||||
|
||||
import numpy as np
|
||||
from bec_lib.device import DeviceBase
|
||||
from bec_lib.logger import bec_logger
|
||||
from bec_server.scan_server.scans import AsyncFlyScanBase
|
||||
|
||||
logger = bec_logger.logger
|
||||
|
||||
|
||||
class XASSimpleScan(AsyncFlyScanBase):
|
||||
"""Class for the XAS simple scan"""
|
||||
|
||||
scan_name = "xas_simple_scan"
|
||||
scan_type = "fly"
|
||||
scan_report_hint = "device_progress"
|
||||
required_kwargs = []
|
||||
use_scan_progress_report = False
|
||||
pre_move = False
|
||||
gui_config = {
|
||||
"Movement Parameters": ["start", "stop"],
|
||||
"Scan Parameters": ["scan_time", "scan_duration"],
|
||||
}
|
||||
|
||||
def __init__(
|
||||
self,
|
||||
start: float,
|
||||
stop: float,
|
||||
scan_time: float,
|
||||
scan_duration: float,
|
||||
motor: DeviceBase = "mo1_bragg",
|
||||
**kwargs,
|
||||
):
|
||||
"""The xas_simple_scan is used to start a simple oscillating scan on the mono bragg motor.
|
||||
Start and Stop define the energy range for the scan, scan_time is the time for one scan
|
||||
cycle and scan_duration is the duration of the scan. If scan duration is set to 0, the
|
||||
scan will run infinitely.
|
||||
|
||||
Args:
|
||||
start (float): Start energy for the scan.
|
||||
stop (float): Stop energy for the scan.
|
||||
scan_time (float): Time for one scan cycle.
|
||||
scan_duration (float): Duration of the scan.
|
||||
motor (DeviceBase, optional): Motor device to be used for the scan.
|
||||
Defaults to "mo1_bragg".
|
||||
Examples:
|
||||
>>> scans.xas_simple_scan(start=8000, stop=9000, scan_time=1, scan_duration=10)
|
||||
"""
|
||||
super().__init__(**kwargs)
|
||||
self.motor = motor
|
||||
self.start = start
|
||||
self.stop = stop
|
||||
self.scan_time = scan_time
|
||||
self.scan_duration = scan_duration
|
||||
self.primary_readout_cycle = 1
|
||||
|
||||
def update_readout_priority(self):
|
||||
"""Ensure that NIDAQ is not monitored for any quick EXAFS."""
|
||||
super().update_readout_priority()
|
||||
self.readout_priority["async"].append("nidaq")
|
||||
|
||||
def prepare_positions(self):
|
||||
"""Prepare the positions for the scan.
|
||||
|
||||
Use here only start and end energy defining the range for the scan.
|
||||
"""
|
||||
self.positions = np.array([self.start, self.stop], dtype=float)
|
||||
self.num_pos = None
|
||||
yield None
|
||||
|
||||
def pre_scan(self):
|
||||
"""Pre Scan action."""
|
||||
|
||||
self._check_limits()
|
||||
# Ensure parent class pre_scan actions to be called.
|
||||
yield from super().pre_scan()
|
||||
|
||||
def scan_report_instructions(self):
|
||||
"""
|
||||
Return the instructions for the scan report.
|
||||
"""
|
||||
yield from self.stubs.scan_report_instruction({"device_progress": [self.motor]})
|
||||
|
||||
def scan_core(self):
|
||||
"""Run the scan core.
|
||||
Kickoff the oscillation on the Bragg motor and wait for the completion of the motion.
|
||||
"""
|
||||
# Start the oscillation on the Bragg motor.
|
||||
yield from self.stubs.kickoff(device=self.motor)
|
||||
complete_status = yield from self.stubs.complete(device=self.motor, wait=False)
|
||||
|
||||
while not complete_status.done:
|
||||
# Readout monitored devices
|
||||
yield from self.stubs.read(group="monitored", point_id=self.point_id)
|
||||
time.sleep(self.primary_readout_cycle)
|
||||
self.point_id += 1
|
||||
|
||||
self.num_pos = self.point_id
|
||||
|
||||
|
||||
class XASSimpleScanWithXRD(XASSimpleScan):
|
||||
"""Class for the XAS simple scan with XRD"""
|
||||
|
||||
scan_name = "xas_simple_scan_with_xrd"
|
||||
gui_config = {
|
||||
"Movement Parameters": ["start", "stop"],
|
||||
"Scan Parameters": ["scan_time", "scan_duration"],
|
||||
"Low Energy Range": ["xrd_enable_low", "num_trigger_low", "exp_time_low", "cycle_low"],
|
||||
"High Energy Range": ["xrd_enable_high", "num_trigger_high", "exp_time_high", "cycle_high"],
|
||||
}
|
||||
|
||||
def __init__(
|
||||
self,
|
||||
start: float,
|
||||
stop: float,
|
||||
scan_time: float,
|
||||
scan_duration: float,
|
||||
xrd_enable_low: bool,
|
||||
num_trigger_low: int,
|
||||
exp_time_low: float,
|
||||
cycle_low: int,
|
||||
xrd_enable_high: bool,
|
||||
num_trigger_high: int,
|
||||
exp_time_high: float,
|
||||
cycle_high: float,
|
||||
motor: DeviceBase = "mo1_bragg",
|
||||
**kwargs,
|
||||
):
|
||||
"""The xas_simple_scan_with_xrd is an oscillation motion on the mono motor
|
||||
with XRD triggering at low and high energy ranges.
|
||||
If scan duration is set to 0, the scan will run infinitely.
|
||||
|
||||
Args:
|
||||
start (float): Start energy for the scan.
|
||||
stop (float): Stop energy for the scan.
|
||||
scan_time (float): Time for one oscillation .
|
||||
scan_duration (float): Total duration of the scan.
|
||||
xrd_enable_low (bool): Enable XRD triggering for the low energy range.
|
||||
num_trigger_low (int): Number of triggers for the low energy range.
|
||||
exp_time_low (float): Exposure time for the low energy range.
|
||||
cycle_low (int): Specify how often the triggers should be considered,
|
||||
every nth cycle for low
|
||||
xrd_enable_high (bool): Enable XRD triggering for the high energy range.
|
||||
num_trigger_high (int): Number of triggers for the high energy range.
|
||||
exp_time_high (float): Exposure time for the high energy range.
|
||||
cycle_high (int): Specify how often the triggers should be considered,
|
||||
every nth cycle for high
|
||||
motor (DeviceBase, optional): Motor device to be used for the scan.
|
||||
Defaults to "mo1_bragg".
|
||||
|
||||
Examples:
|
||||
>>> scans.xas_simple_scan_with_xrd(start=8000, stop=9000, scan_time=1, scan_duration=10, xrd_enable_low=True, num_trigger_low=5, cycle_low=2, exp_time_low=100, xrd_enable_high=False, num_trigger_high=3, cycle_high=1, exp_time_high=1000)
|
||||
"""
|
||||
super().__init__(
|
||||
start=start,
|
||||
stop=stop,
|
||||
scan_time=scan_time,
|
||||
scan_duration=scan_duration,
|
||||
motor=motor,
|
||||
**kwargs,
|
||||
)
|
||||
self.xrd_enable_low = xrd_enable_low
|
||||
self.num_trigger_low = num_trigger_low
|
||||
self.exp_time_low = exp_time_low
|
||||
self.cycle_low = cycle_low
|
||||
self.xrd_enable_high = xrd_enable_high
|
||||
self.num_trigger_high = num_trigger_high
|
||||
self.exp_time_high = exp_time_high
|
||||
self.cycle_high = cycle_high
|
||||
|
||||
|
||||
class XASAdvancedScan(XASSimpleScan):
|
||||
"""Class for the XAS advanced scan"""
|
||||
|
||||
scan_name = "xas_advanced_scan"
|
||||
gui_config = {
|
||||
"Movement Parameters": ["start", "stop"],
|
||||
"Scan Parameters": ["scan_time", "scan_duration"],
|
||||
"Spline Parameters": ["p_kink", "e_kink"],
|
||||
}
|
||||
|
||||
def __init__(
|
||||
self,
|
||||
start: float,
|
||||
stop: float,
|
||||
scan_time: float,
|
||||
scan_duration: float,
|
||||
p_kink: float,
|
||||
e_kink: float,
|
||||
motor: DeviceBase = "mo1_bragg",
|
||||
**kwargs,
|
||||
):
|
||||
"""The xas_advanced_scan is an oscillation motion on the mono motor.
|
||||
Start and Stop define the energy range for the scan, scan_time is the
|
||||
time for one scan cycle and scan_duration is the duration of the scan.
|
||||
If scan duration is set to 0, the scan will run infinitely.
|
||||
p_kink and e_kink add a kink to the motion profile to slow down in the
|
||||
exafs region of the scan.
|
||||
|
||||
Args:
|
||||
start (float): Start angle for the scan.
|
||||
stop (float): Stop angle for the scan.
|
||||
scan_time (float): Time for one oscillation .
|
||||
scan_duration (float): Total duration of the scan.
|
||||
p_kink (float): Position of the kink.
|
||||
e_kink (float): Energy of the kink.
|
||||
motor (DeviceBase, optional): Motor device to be used for the scan.
|
||||
Defaults to "mo1_bragg".
|
||||
|
||||
Examples:
|
||||
>>> scans.xas_advanced_scan(start=10000, stop=12000, scan_time=0.5, scan_duration=10, p_kink=50, e_kink=10500)
|
||||
"""
|
||||
super().__init__(
|
||||
start=start,
|
||||
stop=stop,
|
||||
scan_time=scan_time,
|
||||
scan_duration=scan_duration,
|
||||
motor=motor,
|
||||
**kwargs,
|
||||
)
|
||||
self.p_kink = p_kink
|
||||
self.e_kink = e_kink
|
||||
|
||||
|
||||
class XASAdvancedScanWithXRD(XASAdvancedScan):
|
||||
"""Class for the XAS advanced scan with XRD"""
|
||||
|
||||
scan_name = "xas_advanced_scan_with_xrd"
|
||||
gui_config = {
|
||||
"Movement Parameters": ["start", "stop"],
|
||||
"Scan Parameters": ["scan_time", "scan_duration"],
|
||||
"Spline Parameters": ["p_kink", "e_kink"],
|
||||
"Low Energy Range": ["xrd_enable_low", "num_trigger_low", "exp_time_low", "cycle_low"],
|
||||
"High Energy Range": ["xrd_enable_high", "num_trigger_high", "exp_time_high", "cycle_high"],
|
||||
}
|
||||
|
||||
def __init__(
|
||||
self,
|
||||
start: float,
|
||||
stop: float,
|
||||
scan_time: float,
|
||||
scan_duration: float,
|
||||
p_kink: float,
|
||||
e_kink: float,
|
||||
xrd_enable_low: bool,
|
||||
num_trigger_low: int,
|
||||
exp_time_low: float,
|
||||
cycle_low: int,
|
||||
xrd_enable_high: bool,
|
||||
num_trigger_high: int,
|
||||
exp_time_high: float,
|
||||
cycle_high: float,
|
||||
motor: DeviceBase = "mo1_bragg",
|
||||
**kwargs,
|
||||
):
|
||||
"""The xas_advanced_scan is an oscillation motion on the mono motor
|
||||
with XRD triggering at low and high energy ranges.
|
||||
Start and Stop define the energy range for the scan, scan_time is the time for
|
||||
one scan cycle and scan_duration is the duration of the scan. If scan duration
|
||||
is set to 0, the scan will run infinitely. p_kink and e_kink add a kink to the
|
||||
motion profile to slow down in the exafs region of the scan.
|
||||
|
||||
Args:
|
||||
start (float): Start angle for the scan.
|
||||
stop (float): Stop angle for the scan.
|
||||
scan_time (float): Time for one oscillation .
|
||||
scan_duration (float): Total duration of the scan.
|
||||
p_kink (float): Position of kink.
|
||||
e_kink (float): Energy of the kink.
|
||||
xrd_enable_low (bool): Enable XRD triggering for the low energy range.
|
||||
num_trigger_low (int): Number of triggers for the low energy range.
|
||||
exp_time_low (float): Exposure time for the low energy range.
|
||||
cycle_low (int): Specify how often the triggers should be considered,
|
||||
every nth cycle for low
|
||||
xrd_enable_high (bool): Enable XRD triggering for the high energy range.
|
||||
num_trigger_high (int): Number of triggers for the high energy range.
|
||||
exp_time_high (float): Exposure time for the high energy range.
|
||||
cycle_high (int): Specify how often the triggers should be considered,
|
||||
every nth cycle for high
|
||||
motor (DeviceBase, optional): Motor device to be used for the scan.
|
||||
Defaults to "mo1_bragg".
|
||||
|
||||
Examples:
|
||||
>>> scans.xas_advanced_scan_with_xrd(start=10000, stop=12000, scan_time=0.5, scan_duration=10, p_kink=50, e_kink=10500, xrd_enable_low=True, num_trigger_low=5, cycle_low=2, exp_time_low=100, xrd_enable_high=False, num_trigger_high=3, cycle_high=1, exp_time_high=1000)
|
||||
"""
|
||||
super().__init__(
|
||||
start=start,
|
||||
stop=stop,
|
||||
scan_time=scan_time,
|
||||
scan_duration=scan_duration,
|
||||
p_kink=p_kink,
|
||||
e_kink=e_kink,
|
||||
motor=motor,
|
||||
**kwargs,
|
||||
)
|
||||
self.p_kink = p_kink
|
||||
self.e_kink = e_kink
|
||||
self.xrd_enable_low = xrd_enable_low
|
||||
self.num_trigger_low = num_trigger_low
|
||||
self.exp_time_low = exp_time_low
|
||||
self.cycle_low = cycle_low
|
||||
self.xrd_enable_high = xrd_enable_high
|
||||
self.num_trigger_high = num_trigger_high
|
||||
self.exp_time_high = exp_time_high
|
||||
self.cycle_high = cycle_high
|
||||
84
debye_bec/scans/nidaq_cont_scan.py
Normal file
84
debye_bec/scans/nidaq_cont_scan.py
Normal file
@@ -0,0 +1,84 @@
|
||||
"""This module contains the scan class for the nidaq of the Debye beamline for use in continuous mode."""
|
||||
|
||||
import time
|
||||
from typing import Literal
|
||||
|
||||
import numpy as np
|
||||
from bec_lib.device import DeviceBase
|
||||
from bec_lib.logger import bec_logger
|
||||
from bec_server.scan_server.scans import AsyncFlyScanBase
|
||||
|
||||
logger = bec_logger.logger
|
||||
|
||||
|
||||
class NIDAQContinuousScan(AsyncFlyScanBase):
|
||||
"""Class for the nidaq continuous scan (without mono)"""
|
||||
|
||||
scan_name = "nidaq_continuous_scan"
|
||||
scan_type = "fly"
|
||||
scan_report_hint = "device_progress"
|
||||
required_kwargs = []
|
||||
use_scan_progress_report = False
|
||||
pre_move = False
|
||||
gui_config = {"Scan Parameters": ["scan_duration"], "Data Compression": ["compression"]}
|
||||
|
||||
def __init__(
|
||||
self, scan_duration: float, daq: DeviceBase = "nidaq", compression: bool = False, **kwargs
|
||||
):
|
||||
"""The NIDAQ continuous scan is used to measure with the NIDAQ without moving the
|
||||
monochromator or any other motor. The NIDAQ thus runs in continuous mode, with a
|
||||
set scan_duration.
|
||||
|
||||
Args:
|
||||
scan_duration (float): Duration of the scan.
|
||||
daq (DeviceBase, optional): DAQ device to be used for the scan.
|
||||
Defaults to "nidaq".
|
||||
Examples:
|
||||
>>> scans.nidaq_continuous_scan(scan_duration=10)
|
||||
"""
|
||||
super().__init__(**kwargs)
|
||||
self.scan_duration = scan_duration
|
||||
self.daq = daq
|
||||
self.start_time = 0
|
||||
self.primary_readout_cycle = 1
|
||||
self.scan_parameters["scan_duration"] = scan_duration
|
||||
self.scan_parameters["compression"] = compression
|
||||
|
||||
def update_readout_priority(self):
|
||||
"""Ensure that NIDAQ is not monitored for any quick EXAFS."""
|
||||
super().update_readout_priority()
|
||||
self.readout_priority["async"].append("nidaq")
|
||||
|
||||
def prepare_positions(self):
|
||||
"""Prepare the positions for the scan."""
|
||||
yield None
|
||||
|
||||
def pre_scan(self):
|
||||
"""Pre Scan action."""
|
||||
|
||||
self.start_time = time.time()
|
||||
# Ensure parent class pre_scan actions to be called.
|
||||
yield from super().pre_scan()
|
||||
|
||||
def scan_report_instructions(self):
|
||||
"""
|
||||
Return the instructions for the scan report.
|
||||
"""
|
||||
yield from self.stubs.scan_report_instruction({"device_progress": [self.daq]})
|
||||
|
||||
def scan_core(self):
|
||||
"""Run the scan core.
|
||||
Kickoff the acquisition of the NIDAQ wait for the completion of the scan.
|
||||
"""
|
||||
kickoff_status = yield from self.stubs.kickoff(device=self.daq)
|
||||
kickoff_status.wait(timeout=5) # wait for proper kickoff of device
|
||||
|
||||
complete_status = yield from self.stubs.complete(device=self.daq, wait=False)
|
||||
|
||||
while not complete_status.done:
|
||||
# Readout monitored devices
|
||||
yield from self.stubs.read(group="monitored", point_id=self.point_id)
|
||||
time.sleep(self.primary_readout_cycle)
|
||||
self.point_id += 1
|
||||
|
||||
self.num_pos = self.point_id
|
||||
33
debye_bec/scans/scan_plugin_template.py
Normal file
33
debye_bec/scans/scan_plugin_template.py
Normal file
@@ -0,0 +1,33 @@
|
||||
"""
|
||||
SCAN PLUGINS
|
||||
|
||||
All new scans should be derived from ScanBase. ScanBase provides various methods that can be customized and overriden
|
||||
but they are executed in a specific order:
|
||||
|
||||
- self.initialize # initialize the class if needed
|
||||
- self.read_scan_motors # used to retrieve the start position (and the relative position shift if needed)
|
||||
- self.prepare_positions # prepare the positions for the scan. The preparation is split into multiple sub fuctions:
|
||||
- self._calculate_positions # calculate the positions
|
||||
- self._set_positions_offset # apply the previously retrieved scan position shift (if needed)
|
||||
- self._check_limits # tests to ensure the limits won't be reached
|
||||
- self.open_scan # send an open_scan message including the scan name, the number of points and the scan motor names
|
||||
- self.stage # stage all devices for the upcoming acquisiton
|
||||
- self.run_baseline_readings # read all devices to get a baseline for the upcoming scan
|
||||
- self.pre_scan # perform additional actions before the scan starts
|
||||
- self.scan_core # run a loop over all position
|
||||
- self._at_each_point(ind, pos) # called at each position with the current index and the target positions as arguments
|
||||
- self.finalize # clean up the scan, e.g. move back to the start position; wait everything to finish
|
||||
- self.unstage # unstage all devices that have been staged before
|
||||
- self.cleanup # send a close scan message and perform additional cleanups if needed
|
||||
"""
|
||||
|
||||
# import time
|
||||
|
||||
# import numpy as np
|
||||
|
||||
# from bec_lib import bec_logger, messages
|
||||
# from bec_lib.endpoints import MessageEndpoints
|
||||
# from bec_server.scan_server.errors import ScanAbortion
|
||||
# from bec_server.scan_server.scans import FlyScanBase, RequestBase, ScanArgType, ScanBase
|
||||
|
||||
# logger = bec_logger.logger
|
||||
@@ -7,10 +7,12 @@ import traceback
|
||||
|
||||
import h5py
|
||||
import numpy as np
|
||||
from bec_lib import MessageEndpoints, RedisConnector, ServiceConfig, bec_logger, messages
|
||||
from bec_lib import bec_logger, messages
|
||||
from bec_lib.bec_service import BECService
|
||||
from bec_lib.file_utils import FileWriterMixin
|
||||
from bec_lib.redis_connector import MessageObject
|
||||
from bec_lib.endpoints import MessageEndpoints
|
||||
from bec_lib.file_utils import FileWriter
|
||||
from bec_lib.redis_connector import MessageObject, RedisConnector
|
||||
from bec_lib.service_config import ServiceConfig
|
||||
|
||||
logger = bec_logger.logger
|
||||
|
||||
@@ -27,7 +29,7 @@ class NIDAQWriterService(BECService):
|
||||
super().__init__(config=config, connector_cls=connector_cls, unique_service=True)
|
||||
self.queue = queue.Queue()
|
||||
config = self._service_config.service_config.get("file_writer")
|
||||
self.writer_mixin = FileWriterMixin(config)
|
||||
self.writer_mixin = FileWriter(service_config=config)
|
||||
self._scan_status_consumer = None
|
||||
self._ni_data_consumer = None
|
||||
self._ni_data_event = None
|
||||
@@ -159,7 +161,7 @@ class NIDAQWriterService(BECService):
|
||||
signals = {}
|
||||
|
||||
for key in msgs[0].content["signals"]:
|
||||
signals[key] = np.concatenate([msg.content["signals"][key] for msg in msgs])
|
||||
signals[key] = np.concatenate([msg.content["signals"][key]["value"] for msg in msgs])
|
||||
|
||||
# write data to queue
|
||||
self.queue.put(signals)
|
||||
@@ -1,4 +1,6 @@
|
||||
from bec_lib import MessageEndpoints, RedisConnector, messages
|
||||
from bec_lib import messages
|
||||
from bec_lib.endpoints import MessageEndpoints
|
||||
from bec_lib.redis_connector import RedisConnector
|
||||
|
||||
|
||||
def send_scan_status(scan_number, status):
|
||||
@@ -24,19 +26,9 @@ if __name__ == "__main__":
|
||||
parser = argparse.ArgumentParser(description="Scan status helper")
|
||||
command = parser.add_subparsers(dest="command")
|
||||
start = command.add_parser("start", help="Start a new scan")
|
||||
start.add_argument(
|
||||
"--scan_number",
|
||||
type=int,
|
||||
required=True,
|
||||
help="Scan number",
|
||||
)
|
||||
start.add_argument("--scan_number", type=int, required=True, help="Scan number")
|
||||
stop = command.add_parser("stop", help="Stop the scan")
|
||||
stop.add_argument(
|
||||
"--scan_number",
|
||||
type=int,
|
||||
required=True,
|
||||
help="Scan number",
|
||||
)
|
||||
stop.add_argument("--scan_number", type=int, required=True, help="Scan number")
|
||||
|
||||
args = parser.parse_args()
|
||||
send_scan_status(args.scan_number, args.command)
|
||||
@@ -2,7 +2,8 @@ import threading
|
||||
import time
|
||||
|
||||
import numpy as np
|
||||
from bec_lib import MessageEndpoints, RedisConnector, ServiceConfig, bec_logger, messages
|
||||
from bec_lib import messages
|
||||
from bec_lib.redis_connector import RedisConnector
|
||||
|
||||
|
||||
class NIDAQSim(threading.Thread):
|
||||
@@ -13,10 +14,7 @@ class NIDAQSim(threading.Thread):
|
||||
index = 0
|
||||
producer = RedisConnector(["localhost:6379"]).producer()
|
||||
signal = np.asarray(range(index, index + 600000))
|
||||
signals = {
|
||||
"signal1": signal,
|
||||
"signal2": signal,
|
||||
}
|
||||
signals = {"signal1": signal, "signal2": signal}
|
||||
|
||||
msg = messages.DeviceMessage(signals=signals)
|
||||
msg = msg.dumps()
|
||||
@@ -40,9 +38,6 @@ class NIDAQSim(threading.Thread):
|
||||
|
||||
time.sleep(0.5)
|
||||
print(f"Elapsed time: {time.time() - start}")
|
||||
print(f"Total time: {time.time() - total_time}")
|
||||
print(f"FPS: {index / (time.time() - total_time)}")
|
||||
print(f"Signal size: {signal.nbytes/1e6*2} MB")
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
0
debye_bec/services/__init__.py
Normal file
0
debye_bec/services/__init__.py
Normal file
@@ -1,15 +1,14 @@
|
||||
import argparse
|
||||
import threading
|
||||
|
||||
from bec_lib import RedisConnector, ServiceConfig, bec_logger
|
||||
from NIDAQ_writer import NIDAQWriterService
|
||||
from bec_lib import bec_logger
|
||||
from bec_lib.redis_connector import RedisConnector
|
||||
from bec_lib.service_config import ServiceConfig
|
||||
|
||||
from debye_bec.services.NIDAQ_writer import NIDAQWriterService
|
||||
|
||||
parser = argparse.ArgumentParser(formatter_class=argparse.ArgumentDefaultsHelpFormatter)
|
||||
parser.add_argument(
|
||||
"--config",
|
||||
default="",
|
||||
help="path to the config file",
|
||||
)
|
||||
parser.add_argument("--config", default="", help="path to the config file")
|
||||
clargs = parser.parse_args()
|
||||
config_path = clargs.config
|
||||
|
||||
@@ -17,10 +16,7 @@ config = ServiceConfig(config_path)
|
||||
bec_logger.level = bec_logger.LOGLEVEL.INFO
|
||||
logger = bec_logger.logger
|
||||
|
||||
bec_server = NIDAQWriterService(
|
||||
config=config,
|
||||
connector_cls=RedisConnector,
|
||||
)
|
||||
bec_server = NIDAQWriterService(config=config, connector_cls=RedisConnector)
|
||||
try:
|
||||
event = threading.Event()
|
||||
# pylint: disable=E1102
|
||||
77
pyproject.toml
Normal file
77
pyproject.toml
Normal file
@@ -0,0 +1,77 @@
|
||||
[build-system]
|
||||
requires = ["hatchling"]
|
||||
build-backend = "hatchling.build"
|
||||
|
||||
[project]
|
||||
name = "debye_bec"
|
||||
version = "0.0.0"
|
||||
description = "A plugin repository for BEC"
|
||||
requires-python = ">=3.10"
|
||||
classifiers = [
|
||||
"Development Status :: 3 - Alpha",
|
||||
"Programming Language :: Python :: 3",
|
||||
"Topic :: Scientific/Engineering",
|
||||
]
|
||||
dependencies = ["numpy", "scipy", "bec_lib", "h5py", "ophyd_devices"]
|
||||
|
||||
[project.optional-dependencies]
|
||||
dev = [
|
||||
"black",
|
||||
"copier",
|
||||
"isort",
|
||||
"coverage",
|
||||
"pylint",
|
||||
"pytest",
|
||||
"pytest-random-order",
|
||||
"bec_server",
|
||||
]
|
||||
|
||||
[project.entry-points."bec"]
|
||||
plugin_bec = "debye_bec"
|
||||
|
||||
[project.entry-points."bec.deployment.device_server"]
|
||||
plugin_ds_startup = "debye_bec.deployments.device_server.startup:run"
|
||||
|
||||
[project.entry-points."bec.file_writer"]
|
||||
plugin_file_writer = "debye_bec.file_writer"
|
||||
|
||||
[project.entry-points."bec.scans"]
|
||||
plugin_scans = "debye_bec.scans"
|
||||
|
||||
[project.entry-points."bec.scans.metadata_schema"]
|
||||
plugin_metadata_schema = "debye_bec.scans.metadata_schema"
|
||||
|
||||
[project.entry-points."bec.ipython_client_startup"]
|
||||
plugin_ipython_client_pre = "debye_bec.bec_ipython_client.startup.pre_startup"
|
||||
plugin_ipython_client_post = "debye_bec.bec_ipython_client.startup"
|
||||
|
||||
[project.entry-points."bec.widgets.auto_updates"]
|
||||
plugin_widgets_update = "debye_bec.bec_widgets.auto_updates"
|
||||
|
||||
[project.entry-points."bec.widgets.user_widgets"]
|
||||
plugin_widgets = "debye_bec.bec_widgets.widgets"
|
||||
|
||||
[tool.hatch.build.targets.wheel]
|
||||
include = ["*"]
|
||||
|
||||
[tool.isort]
|
||||
profile = "black"
|
||||
line_length = 100
|
||||
multi_line_output = 3
|
||||
include_trailing_comma = true
|
||||
|
||||
[tool.black]
|
||||
line-length = 100
|
||||
skip-magic-trailing-comma = true
|
||||
|
||||
[tool.pylint.basic]
|
||||
# Good variable names regexes, separated by a comma. If names match any regex,
|
||||
# they will always be accepted
|
||||
good-names-rgxs = [
|
||||
".*scanID.*",
|
||||
".*RID.*",
|
||||
".*pointID.*",
|
||||
".*ID.*",
|
||||
".*_2D.*",
|
||||
".*_1D.*",
|
||||
]
|
||||
21
setup.cfg
21
setup.cfg
@@ -1,21 +0,0 @@
|
||||
[metadata]
|
||||
name = bec_plugins
|
||||
description = BEC plugins to modify the behaviour of services within the BEC framework
|
||||
long_description = file: README.md
|
||||
long_description_content_type = text/markdown
|
||||
url = https://gitlab.psi.ch/bec/bec
|
||||
project_urls =
|
||||
Bug Tracker = https://gitlab.psi.ch/bec/bec/issues
|
||||
classifiers =
|
||||
Programming Language :: Python :: 3
|
||||
Development Status :: 3 - Alpha
|
||||
Topic :: Scientific/Engineering
|
||||
|
||||
[options]
|
||||
package_dir =
|
||||
= .
|
||||
packages = find:
|
||||
python_requires = >=3.10
|
||||
|
||||
[options.packages.find]
|
||||
where = .
|
||||
7
setup.py
7
setup.py
@@ -1,7 +0,0 @@
|
||||
from setuptools import setup
|
||||
|
||||
if __name__ == "__main__":
|
||||
setup(
|
||||
install_requires=["numpy", "h5py", "bec-lib"],
|
||||
extras_require={"dev": ["pytest", "pytest-random-order", "coverage"]},
|
||||
)
|
||||
34
tests/tests_bec_ipython_client/README.md
Normal file
34
tests/tests_bec_ipython_client/README.md
Normal file
@@ -0,0 +1,34 @@
|
||||
# Getting Started with Testing using pytest
|
||||
|
||||
BEC is using the [pytest](https://docs.pytest.org/en/latest/) framework.
|
||||
It can be installed via
|
||||
|
||||
```bash
|
||||
pip install pytest
|
||||
```
|
||||
|
||||
in your _python environment_.
|
||||
We note that pytest is part of the optional-dependencies `[dev]` of the plugin package.
|
||||
|
||||
## Introduction
|
||||
|
||||
Tests in this package should be stored in the `tests` directory.
|
||||
We suggest to sort tests of different submodules, i.e. `scans` or `devices` in the respective folder structure, and to folow a naming convention of `<test_module_name.py>`.
|
||||
It is mandatory for test files to begin with `test_` for pytest to discover them.
|
||||
|
||||
To run all tests, navigate to the directory of the plugin from the command line, and run the command
|
||||
|
||||
```bash
|
||||
pytest -v --random-order ./tests
|
||||
```
|
||||
|
||||
Note, the python environment needs to be active.
|
||||
The additional arg `-v` allows pytest to run in verbose mode which provides more detailed information about the tests being run.
|
||||
The argument `--random-order` instructs pytest to run the tests in random order, which is the default in the CI pipelines.
|
||||
|
||||
## Test examples
|
||||
|
||||
Writing tests can be quite specific for the given function.
|
||||
We recommend writing tests as isolated as possible, i.e. try to test single functions instead of full classes.
|
||||
A very useful class to enable isolated testing is [MagicMock](https://docs.python.org/3/library/unittest.mock.html).
|
||||
In addition, we also recommend to take a look at the [How-to guides from pytest](https://docs.pytest.org/en/8.0.x/how-to/index.html).
|
||||
34
tests/tests_bec_widgets/README.md
Normal file
34
tests/tests_bec_widgets/README.md
Normal file
@@ -0,0 +1,34 @@
|
||||
# Getting Started with Testing using pytest
|
||||
|
||||
BEC is using the [pytest](https://docs.pytest.org/en/latest/) framework.
|
||||
It can be installed via
|
||||
|
||||
```bash
|
||||
pip install pytest
|
||||
```
|
||||
|
||||
in your _python environment_.
|
||||
We note that pytest is part of the optional-dependencies `[dev]` of the plugin package.
|
||||
|
||||
## Introduction
|
||||
|
||||
Tests in this package should be stored in the `tests` directory.
|
||||
We suggest to sort tests of different submodules, i.e. `scans` or `devices` in the respective folder structure, and to folow a naming convention of `<test_module_name.py>`.
|
||||
It is mandatory for test files to begin with `test_` for pytest to discover them.
|
||||
|
||||
To run all tests, navigate to the directory of the plugin from the command line, and run the command
|
||||
|
||||
```bash
|
||||
pytest -v --random-order ./tests
|
||||
```
|
||||
|
||||
Note, the python environment needs to be active.
|
||||
The additional arg `-v` allows pytest to run in verbose mode which provides more detailed information about the tests being run.
|
||||
The argument `--random-order` instructs pytest to run the tests in random order, which is the default in the CI pipelines.
|
||||
|
||||
## Test examples
|
||||
|
||||
Writing tests can be quite specific for the given function.
|
||||
We recommend writing tests as isolated as possible, i.e. try to test single functions instead of full classes.
|
||||
A very useful class to enable isolated testing is [MagicMock](https://docs.python.org/3/library/unittest.mock.html).
|
||||
In addition, we also recommend to take a look at the [How-to guides from pytest](https://docs.pytest.org/en/8.0.x/how-to/index.html).
|
||||
34
tests/tests_dap_services/README.md
Normal file
34
tests/tests_dap_services/README.md
Normal file
@@ -0,0 +1,34 @@
|
||||
# Getting Started with Testing using pytest
|
||||
|
||||
BEC is using the [pytest](https://docs.pytest.org/en/latest/) framework.
|
||||
It can be installed via
|
||||
|
||||
```bash
|
||||
pip install pytest
|
||||
```
|
||||
|
||||
in your _python environment_.
|
||||
We note that pytest is part of the optional-dependencies `[dev]` of the plugin package.
|
||||
|
||||
## Introduction
|
||||
|
||||
Tests in this package should be stored in the `tests` directory.
|
||||
We suggest to sort tests of different submodules, i.e. `scans` or `devices` in the respective folder structure, and to folow a naming convention of `<test_module_name.py>`.
|
||||
It is mandatory for test files to begin with `test_` for pytest to discover them.
|
||||
|
||||
To run all tests, navigate to the directory of the plugin from the command line, and run the command
|
||||
|
||||
```bash
|
||||
pytest -v --random-order ./tests
|
||||
```
|
||||
|
||||
Note, the python environment needs to be active.
|
||||
The additional arg `-v` allows pytest to run in verbose mode which provides more detailed information about the tests being run.
|
||||
The argument `--random-order` instructs pytest to run the tests in random order, which is the default in the CI pipelines.
|
||||
|
||||
## Test examples
|
||||
|
||||
Writing tests can be quite specific for the given function.
|
||||
We recommend writing tests as isolated as possible, i.e. try to test single functions instead of full classes.
|
||||
A very useful class to enable isolated testing is [MagicMock](https://docs.python.org/3/library/unittest.mock.html).
|
||||
In addition, we also recommend to take a look at the [How-to guides from pytest](https://docs.pytest.org/en/8.0.x/how-to/index.html).
|
||||
34
tests/tests_devices/README.md
Normal file
34
tests/tests_devices/README.md
Normal file
@@ -0,0 +1,34 @@
|
||||
# Getting Started with Testing using pytest
|
||||
|
||||
BEC is using the [pytest](https://docs.pytest.org/en/latest/) framework.
|
||||
It can be installed via
|
||||
|
||||
```bash
|
||||
pip install pytest
|
||||
```
|
||||
|
||||
in your _python environment_.
|
||||
We note that pytest is part of the optional-dependencies `[dev]` of the plugin package.
|
||||
|
||||
## Introduction
|
||||
|
||||
Tests in this package should be stored in the `tests` directory.
|
||||
We suggest to sort tests of different submodules, i.e. `scans` or `devices` in the respective folder structure, and to folow a naming convention of `<test_module_name.py>`.
|
||||
It is mandatory for test files to begin with `test_` for pytest to discover them.
|
||||
|
||||
To run all tests, navigate to the directory of the plugin from the command line, and run the command
|
||||
|
||||
```bash
|
||||
pytest -v --random-order ./tests
|
||||
```
|
||||
|
||||
Note, the python environment needs to be active.
|
||||
The additional arg `-v` allows pytest to run in verbose mode which provides more detailed information about the tests being run.
|
||||
The argument `--random-order` instructs pytest to run the tests in random order, which is the default in the CI pipelines.
|
||||
|
||||
## Test examples
|
||||
|
||||
Writing tests can be quite specific for the given function.
|
||||
We recommend writing tests as isolated as possible, i.e. try to test single functions instead of full classes.
|
||||
A very useful class to enable isolated testing is [MagicMock](https://docs.python.org/3/library/unittest.mock.html).
|
||||
In addition, we also recommend to take a look at the [How-to guides from pytest](https://docs.pytest.org/en/8.0.x/how-to/index.html).
|
||||
68
tests/tests_devices/test_cameras.py
Normal file
68
tests/tests_devices/test_cameras.py
Normal file
@@ -0,0 +1,68 @@
|
||||
"""Module to test prosilica and Basler cam integrations."""
|
||||
|
||||
import threading
|
||||
from unittest import mock
|
||||
|
||||
import ophyd
|
||||
import pytest
|
||||
from ophyd_devices.devices.areadetector.cam import AravisDetectorCam, ProsilicaDetectorCam
|
||||
from ophyd_devices.devices.areadetector.plugins import ImagePlugin_V35
|
||||
from ophyd_devices.tests.utils import MockPV, patch_dual_pvs
|
||||
|
||||
from debye_bec.devices.cameras.basler_cam import BaslerCam
|
||||
from debye_bec.devices.cameras.prosilica_cam import ProsilicaCam
|
||||
|
||||
# pylint: disable=protected-access
|
||||
# pylint: disable=redefined-outer-name
|
||||
|
||||
|
||||
@pytest.fixture(scope="function")
|
||||
def mock_basler():
|
||||
"""Fixture to mock the camera device."""
|
||||
name = "cam"
|
||||
prefix = "test:"
|
||||
with mock.patch.object(ophyd, "cl") as mock_cl:
|
||||
mock_cl.get_pv = MockPV
|
||||
mock_cl.thread_class = threading.Thread
|
||||
dev = BaslerCam(name=name, prefix=prefix)
|
||||
patch_dual_pvs(dev)
|
||||
yield dev
|
||||
|
||||
|
||||
def test_basler_init(mock_basler):
|
||||
"""Test the initialization of the Basler camera device."""
|
||||
assert mock_basler.name == "cam"
|
||||
assert mock_basler.prefix == "test:"
|
||||
assert isinstance(mock_basler.cam1, AravisDetectorCam)
|
||||
assert isinstance(mock_basler.image1, ImagePlugin_V35)
|
||||
assert mock_basler._update_frequency == 1
|
||||
assert mock_basler._live_mode is False
|
||||
assert mock_basler._live_mode_event is None
|
||||
assert mock_basler._task_status is None
|
||||
assert mock_basler._n_rot90 == -1
|
||||
|
||||
|
||||
@pytest.fixture(scope="function")
|
||||
def mock_prosilica():
|
||||
"""Fixture to mock the camera device."""
|
||||
name = "cam"
|
||||
prefix = "test:"
|
||||
with mock.patch.object(ophyd, "cl") as mock_cl:
|
||||
mock_cl.get_pv = MockPV
|
||||
mock_cl.thread_class = threading.Thread
|
||||
dev = ProsilicaCam(name=name, prefix=prefix)
|
||||
patch_dual_pvs(dev)
|
||||
yield dev
|
||||
|
||||
|
||||
def test_prosilica_init(mock_prosilica):
|
||||
"""Test the initialization of the Prosilica camera device."""
|
||||
assert mock_prosilica.name == "cam"
|
||||
assert mock_prosilica.prefix == "test:"
|
||||
assert isinstance(mock_prosilica.cam1, ProsilicaDetectorCam)
|
||||
assert isinstance(mock_prosilica.image1, ImagePlugin_V35)
|
||||
assert mock_prosilica._update_frequency == 1
|
||||
assert mock_prosilica._live_mode is False
|
||||
assert mock_prosilica._live_mode_event is None
|
||||
assert mock_prosilica._task_status is None
|
||||
assert mock_prosilica._n_rot90 == -1
|
||||
85
tests/tests_devices/test_debye_base_cam.py
Normal file
85
tests/tests_devices/test_debye_base_cam.py
Normal file
@@ -0,0 +1,85 @@
|
||||
"""Module to test camera base integration class for Debye."""
|
||||
|
||||
import threading
|
||||
from unittest import mock
|
||||
|
||||
import ophyd
|
||||
import pytest
|
||||
from ophyd_devices.tests.utils import MockPV, patch_dual_pvs
|
||||
|
||||
from debye_bec.devices.cameras.debye_base_cam import DebyeBaseCamera
|
||||
|
||||
# pylint: disable=protected-access
|
||||
# pylint: disable=redefined-outer-name
|
||||
|
||||
|
||||
@pytest.fixture(scope="function")
|
||||
def mock_cam():
|
||||
"""Fixture to mock the camera device."""
|
||||
name = "cam"
|
||||
prefix = "test:"
|
||||
with mock.patch.object(ophyd, "cl") as mock_cl:
|
||||
mock_cl.get_pv = MockPV
|
||||
mock_cl.thread_class = threading.Thread
|
||||
dev = DebyeBaseCamera(name=name, prefix=prefix)
|
||||
patch_dual_pvs(dev)
|
||||
yield dev
|
||||
|
||||
|
||||
def test_init(mock_cam):
|
||||
"""Test the initialization of the camera device."""
|
||||
assert mock_cam.name == "cam"
|
||||
assert mock_cam.prefix == "test:"
|
||||
assert mock_cam._update_frequency == 1
|
||||
assert mock_cam._live_mode is False
|
||||
assert mock_cam._live_mode_event is None
|
||||
assert mock_cam._task_status is None
|
||||
assert mock_cam._n_rot90 == -1
|
||||
|
||||
|
||||
def test_start_live_mode(mock_cam):
|
||||
"""Test starting live mode."""
|
||||
|
||||
def mock_emit_to_bec(*args, **kwargs):
|
||||
"""Mock emit_to_bec method."""
|
||||
while not mock_cam._live_mode_event.wait(1 / mock_cam._update_frequency):
|
||||
pass
|
||||
|
||||
with mock.patch.object(mock_cam, "emit_to_bec", side_effect=mock_emit_to_bec):
|
||||
mock_cam._start_live_mode()
|
||||
assert mock_cam._live_mode_event is not None
|
||||
assert mock_cam._task_status is not None
|
||||
assert mock_cam._task_status.state == "running"
|
||||
mock_cam._live_mode_event.set()
|
||||
# Wait for the task to resolve
|
||||
mock_cam._task_status.wait(timeout=5)
|
||||
assert mock_cam._task_status.done is True
|
||||
|
||||
|
||||
def test_stop_live_mode(mock_cam):
|
||||
"""Test stopping live mode."""
|
||||
with mock.patch.object(mock_cam, "_live_mode_event") as mock_live_mode_event:
|
||||
mock_cam._stop_live_mode()
|
||||
assert mock_live_mode_event.set.called
|
||||
assert mock_cam._live_mode_event is None
|
||||
|
||||
|
||||
def test_live_mode_property(mock_cam):
|
||||
"""Test the live_mode property."""
|
||||
assert mock_cam.live_mode is False
|
||||
with mock.patch.object(mock_cam, "_start_live_mode") as mock_start_live_mode:
|
||||
with mock.patch.object(mock_cam, "_stop_live_mode") as mock_stop_live_mode:
|
||||
# Set to true
|
||||
mock_cam.live_mode = True
|
||||
assert mock_start_live_mode.called
|
||||
assert mock_cam._live_mode is True
|
||||
assert mock_start_live_mode.call_count == 1
|
||||
# Second call should call _start_live_mode
|
||||
mock_cam.live_mode = True
|
||||
assert mock_start_live_mode.call_count == 1
|
||||
|
||||
# Set to false
|
||||
mock_cam.live_mode = False
|
||||
assert mock_stop_live_mode.called
|
||||
assert mock_cam._live_mode is False
|
||||
assert mock_stop_live_mode.call_count == 1
|
||||
556
tests/tests_devices/test_mo1_bragg.py
Normal file
556
tests/tests_devices/test_mo1_bragg.py
Normal file
@@ -0,0 +1,556 @@
|
||||
# pylint: skip-file
|
||||
import os
|
||||
import threading
|
||||
import time
|
||||
from dataclasses import fields
|
||||
from unittest import mock
|
||||
|
||||
import ophyd
|
||||
import pytest
|
||||
from bec_lib.messages import ScanQueueMessage, ScanStatusMessage
|
||||
from bec_server.scan_server.scan_assembler import ScanAssembler
|
||||
from bec_server.scan_server.scan_queue import RequestBlock
|
||||
from bec_server.scan_server.scan_worker import ScanWorker
|
||||
from bec_server.scan_server.tests.fixtures import scan_server_mock
|
||||
from ophyd.utils import LimitError
|
||||
from ophyd_devices.tests.utils import MockPV
|
||||
|
||||
# from bec_server.device_server.tests.utils import DMMock
|
||||
from debye_bec.devices.mo1_bragg.mo1_bragg import (
|
||||
Mo1Bragg,
|
||||
Mo1BraggError,
|
||||
ScanControlLoadMessage,
|
||||
ScanControlMode,
|
||||
ScanControlScanStatus,
|
||||
)
|
||||
from debye_bec.devices.mo1_bragg.mo1_bragg_devices import MoveType
|
||||
|
||||
# TODO move this function to ophyd_devices, it is duplicated in csaxs_bec and needed for other pluging repositories
|
||||
from debye_bec.devices.test_utils.utils import patch_dual_pvs
|
||||
|
||||
|
||||
@pytest.fixture(scope="function")
|
||||
def scan_worker_mock(scan_server_mock):
|
||||
scan_server_mock.device_manager.connector = mock.MagicMock()
|
||||
scan_worker = ScanWorker(parent=scan_server_mock)
|
||||
yield scan_worker
|
||||
|
||||
|
||||
@pytest.fixture(scope="function")
|
||||
def mock_bragg():
|
||||
name = "bragg"
|
||||
prefix = "X01DA-OP-MO1:BRAGG:"
|
||||
with mock.patch.object(ophyd, "cl") as mock_cl:
|
||||
mock_cl.get_pv = MockPV
|
||||
mock_cl.thread_class = threading.Thread
|
||||
dev = Mo1Bragg(name=name, prefix=prefix)
|
||||
patch_dual_pvs(dev)
|
||||
yield dev
|
||||
|
||||
|
||||
def test_init(mock_bragg):
|
||||
dev = mock_bragg
|
||||
assert dev.name == "bragg"
|
||||
assert dev.prefix == "X01DA-OP-MO1:BRAGG:"
|
||||
assert dev.crystal.offset_si111._read_pvname == "X01DA-OP-MO1:BRAGG:offset_si111_RBV"
|
||||
assert dev.move_abs._read_pvname == "X01DA-OP-MO1:BRAGG:move_abs"
|
||||
|
||||
|
||||
def test_check_value(mock_bragg):
|
||||
dev = mock_bragg
|
||||
dev.low_lim._read_pv.mock_data = 0
|
||||
dev.high_lim._read_pv.mock_data = 1
|
||||
# nothing happens
|
||||
dev.check_value(0.5)
|
||||
with pytest.raises(LimitError):
|
||||
dev.check_value(15)
|
||||
|
||||
|
||||
def test_egu(mock_bragg):
|
||||
dev = mock_bragg
|
||||
assert dev.egu == "eV"
|
||||
|
||||
|
||||
def test_move_succeeds(mock_bragg):
|
||||
dev = mock_bragg
|
||||
dev.move_abs._read_pv.mock_data = 0
|
||||
# Move succeeds
|
||||
with mock.patch.object(dev.motor_is_moving._read_pv, "mock_data", side_effect=[0, 1]):
|
||||
status = dev.move(0.5)
|
||||
# Sleep needed to allow thread to resolive in _move_and_finish, i.e. and the 0.25s sleep inside the function
|
||||
time.sleep(1)
|
||||
assert status.done is True
|
||||
assert status.success is True
|
||||
assert dev.setpoint.get() == 0.5
|
||||
assert dev.move_abs.get() == 1
|
||||
|
||||
|
||||
def test_stop_move(mock_bragg):
|
||||
dev = mock_bragg
|
||||
dev.move_abs._read_pv.mock_data = 0
|
||||
dev.motor_is_moving._read_pv.mock_data = 0
|
||||
# Move fails
|
||||
status = dev.move(0.5)
|
||||
time.sleep(1)
|
||||
assert status.done is False
|
||||
assert dev._stopped == False
|
||||
dev.stop()
|
||||
time.sleep(0.5)
|
||||
assert dev._stopped == True
|
||||
assert status.done is True
|
||||
assert status.success is False
|
||||
|
||||
|
||||
def test_set_xtal(mock_bragg):
|
||||
dev = mock_bragg
|
||||
dev.set_xtal("111")
|
||||
# Default values for mock
|
||||
assert dev.crystal.offset_si111.get() == 0
|
||||
assert dev.crystal.offset_si311.get() == 0
|
||||
assert dev.crystal.d_spacing_si111.get() == 0
|
||||
assert dev.crystal.d_spacing_si311.get() == 0
|
||||
assert dev.crystal.xtal_enum.get() == 0
|
||||
dev.set_xtal("311", offset_si111=1, offset_si311=2, d_spacing_si111=3, d_spacing_si311=4)
|
||||
assert dev.crystal.offset_si111.get() == 1
|
||||
assert dev.crystal.offset_si311.get() == 2
|
||||
assert dev.crystal.d_spacing_si111.get() == 3
|
||||
assert dev.crystal.d_spacing_si311.get() == 4
|
||||
assert dev.crystal.xtal_enum.get() == 1
|
||||
|
||||
|
||||
def test_set_xas_settings(mock_bragg):
|
||||
dev = mock_bragg
|
||||
dev.set_xas_settings(low=0.5, high=1, scan_time=0.1)
|
||||
assert dev.scan_settings.s_scan_energy_lo.get() == 0.5
|
||||
assert dev.scan_settings.s_scan_energy_hi.get() == 1
|
||||
assert dev.scan_settings.s_scan_scantime.get() == 0.1
|
||||
|
||||
|
||||
def test_set_trig_settings(mock_bragg):
|
||||
dev = mock_bragg
|
||||
dev.set_trig_settings(
|
||||
enable_low=True,
|
||||
enable_high=False,
|
||||
exp_time_high=0.1,
|
||||
exp_time_low=0.01,
|
||||
cycle_low=1,
|
||||
cycle_high=3,
|
||||
)
|
||||
assert dev.scan_settings.trig_ena_lo_enum.get() == True
|
||||
assert dev.scan_settings.trig_ena_hi_enum.get() == False
|
||||
assert dev.scan_settings.trig_every_n_lo.get() == 1
|
||||
assert dev.scan_settings.trig_every_n_hi.get() == 3
|
||||
assert dev.scan_settings.trig_time_lo.get() == 0.01
|
||||
assert dev.scan_settings.trig_time_hi.get() == 0.1
|
||||
|
||||
|
||||
def test_set_control_settings(mock_bragg):
|
||||
dev = mock_bragg
|
||||
dev.set_scan_control_settings(mode=ScanControlMode.SIMPLE, scan_duration=10)
|
||||
assert dev.scan_control.scan_mode_enum.get() == ScanControlMode.SIMPLE
|
||||
assert dev.scan_control.scan_duration.get() == 10
|
||||
dev.set_scan_control_settings(mode=ScanControlMode.ADVANCED, scan_duration=5)
|
||||
assert dev.scan_control.scan_mode_enum.get() == ScanControlMode.ADVANCED
|
||||
assert dev.scan_control.scan_duration.get() == 5
|
||||
|
||||
|
||||
def test_update_scan_parameters(mock_bragg):
|
||||
dev = mock_bragg
|
||||
msg = ScanStatusMessage(
|
||||
scan_id="my_scan_id",
|
||||
status="closed",
|
||||
request_inputs={
|
||||
"inputs": {},
|
||||
"kwargs": {
|
||||
"start": 0,
|
||||
"stop": 5,
|
||||
"scan_time": 1,
|
||||
"scan_duration": 10,
|
||||
"xrd_enable_low": True,
|
||||
"xrd_enable_high": False,
|
||||
"num_trigger_low": 1,
|
||||
"num_trigger_high": 7,
|
||||
"exp_time_low": 1,
|
||||
"exp_time_high": 3,
|
||||
"cycle_low": 1,
|
||||
"cycle_high": 5,
|
||||
"p_kink": 50,
|
||||
"e_kink": 8000,
|
||||
},
|
||||
},
|
||||
info={
|
||||
"kwargs": {
|
||||
"start": 0,
|
||||
"stop": 5,
|
||||
"scan_time": 1,
|
||||
"scan_duration": 10,
|
||||
"xrd_enable_low": True,
|
||||
"xrd_enable_high": False,
|
||||
"num_trigger_low": 1,
|
||||
"num_trigger_high": 7,
|
||||
"exp_time_low": 1,
|
||||
"exp_time_high": 3,
|
||||
"cycle_low": 1,
|
||||
"cycle_high": 5,
|
||||
"p_kink": 50,
|
||||
"e_kink": 8000,
|
||||
}
|
||||
},
|
||||
metadata={},
|
||||
)
|
||||
mock_bragg.scan_info.msg = msg
|
||||
scan_param = dev.scan_parameter.model_dump()
|
||||
for _, v in scan_param.items():
|
||||
assert v == None
|
||||
dev._update_scan_parameter()
|
||||
scan_param = dev.scan_parameter.model_dump()
|
||||
for k, v in scan_param.items():
|
||||
assert v == msg.content["request_inputs"]["kwargs"].get(k, None)
|
||||
|
||||
|
||||
def test_kickoff_scan(mock_bragg):
|
||||
dev = mock_bragg
|
||||
dev.scan_control.scan_status._read_pv.mock_data = ScanControlScanStatus.READY
|
||||
dev.scan_control.scan_duration._read_pv.mock_data = 1
|
||||
dev.scan_control.scan_start_timer._read_pv.mock_data = 0
|
||||
dev.scan_control.scan_start_infinite._read_pv.mock_data = 0
|
||||
status = dev.kickoff()
|
||||
assert status.done is False
|
||||
# TODO MockPV does not support callbacks yet, so we need to improve here #16
|
||||
# dev.scan_control.scan_status._read_pv.mock_data = ScanControlScanStatus.RUNNING
|
||||
# dev.scan_control.scan_status._read_pv.
|
||||
# status.wait(timeout=3) # Callback should resolve now
|
||||
# assert status.done is True
|
||||
# # dev.scan_control.scan_status._read_pv.mock_data = ScanControlScanStatus.RUNNING
|
||||
# time.sleep(0.2)
|
||||
# assert status.done is True
|
||||
assert dev.scan_control.scan_start_timer.get() == 1
|
||||
|
||||
dev.scan_control.scan_duration._read_pv.mock_data = 0
|
||||
dev.scan_control.scan_start_timer._read_pv.mock_data = 0
|
||||
dev.scan_control.scan_start_infinite._read_pv.mock_data = 0
|
||||
dev.scan_control.scan_start_infinite._read_pv.mock_data = 0
|
||||
status = dev.kickoff()
|
||||
dev.kickoff()
|
||||
assert dev.scan_control.scan_start_infinite.get() == 1
|
||||
|
||||
|
||||
def test_complete(mock_bragg):
|
||||
dev = mock_bragg
|
||||
dev.scan_control.scan_done._read_pv.mock_data = 0
|
||||
# Normal case
|
||||
status = dev.complete()
|
||||
assert status.done is False
|
||||
assert status.success is False
|
||||
dev.scan_control.scan_done._read_pv.mock_data = 1
|
||||
status.wait()
|
||||
# time.sleep(0.2)
|
||||
assert status.done is True
|
||||
assert status.success is True
|
||||
|
||||
# Stop called case
|
||||
dev.scan_control.scan_done._read_pv.mock_data = 0
|
||||
status = dev.complete()
|
||||
assert status.done is False
|
||||
assert status.success is False
|
||||
dev.stop()
|
||||
time.sleep(0.2)
|
||||
assert status.done is True
|
||||
assert status.success is False
|
||||
|
||||
|
||||
def test_unstage(mock_bragg):
|
||||
mock_bragg.timeout_for_pvwait = 0.5
|
||||
mock_bragg.scan_control.scan_val_reset._read_pv.mock_data = 0
|
||||
mock_bragg.scan_control.scan_msg._read_pv.mock_data = ScanControlLoadMessage.PENDING
|
||||
|
||||
with mock.patch.object(mock_bragg.scan_control.scan_val_reset, "put") as mock_put:
|
||||
status = mock_bragg.unstage()
|
||||
assert mock_put.call_count == 0
|
||||
mock_bragg.scan_control.scan_msg._read_pv.mock_data = ScanControlLoadMessage.SUCCESS
|
||||
with pytest.raises(TimeoutError):
|
||||
mock_bragg.unstage()
|
||||
assert mock_put.call_count == 1
|
||||
|
||||
|
||||
# TODO reimplement the test for stage method
|
||||
# @pytest.mark.parametrize(
|
||||
# "msg",
|
||||
# [
|
||||
# ScanQueueMessage(
|
||||
# scan_type="monitor_scan",
|
||||
# parameter={
|
||||
# "args": {},
|
||||
# "kwargs": {
|
||||
# "device": "mo1_bragg",
|
||||
# "start": 0,
|
||||
# "stop": 10,
|
||||
# "relative": True,
|
||||
# "system_config": {"file_suffix": None, "file_directory": None},
|
||||
# },
|
||||
# "num_points": 100,
|
||||
# },
|
||||
# queue="primary",
|
||||
# metadata={"RID": "test1234"},
|
||||
# ),
|
||||
# ScanQueueMessage(
|
||||
# scan_type="xas_simple_scan",
|
||||
# parameter={
|
||||
# "args": {},
|
||||
# "kwargs": {
|
||||
# "motor": "mo1_bragg",
|
||||
# "start": 0,
|
||||
# "stop": 10,
|
||||
# "scan_time": 1,
|
||||
# "scan_duration": 10,
|
||||
# "system_config": {"file_suffix": None, "file_directory": None},
|
||||
# },
|
||||
# "num_points": 100,
|
||||
# },
|
||||
# queue="primary",
|
||||
# metadata={"RID": "test1234"},
|
||||
# ),
|
||||
# ScanQueueMessage(
|
||||
# scan_type="xas_simple_scan_with_xrd",
|
||||
# parameter={
|
||||
# "args": {},
|
||||
# "kwargs": {
|
||||
# "motor": "mo1_bragg",
|
||||
# "start": 0,
|
||||
# "stop": 10,
|
||||
# "scan_time": 1,
|
||||
# "scan_duration": 10,
|
||||
# "xrd_enable_low": True,
|
||||
# "xrd_enable_high": False,
|
||||
# "num_trigger_low": 1,
|
||||
# "num_trigger_high": 7,
|
||||
# "exp_time_low": 1,
|
||||
# "exp_time_high": 3,
|
||||
# "cycle_low": 1,
|
||||
# "cycle_high": 5,
|
||||
# "system_config": {"file_suffix": None, "file_directory": None},
|
||||
# },
|
||||
# "num_points": 10,
|
||||
# },
|
||||
# queue="primary",
|
||||
# metadata={"RID": "test1234"},
|
||||
# ),
|
||||
# ScanQueueMessage(
|
||||
# scan_type="xas_advanced_scan",
|
||||
# parameter={
|
||||
# "args": {},
|
||||
# "kwargs": {
|
||||
# "motor": "mo1_bragg",
|
||||
# "start": 8000,
|
||||
# "stop": 9000,
|
||||
# "scan_time": 1,
|
||||
# "scan_duration": 10,
|
||||
# "p_kink": 50,
|
||||
# "e_kink": 8500,
|
||||
# "system_config": {"file_suffix": None, "file_directory": None},
|
||||
# },
|
||||
# "num_points": 100,
|
||||
# },
|
||||
# queue="primary",
|
||||
# metadata={"RID": "test1234"},
|
||||
# ),
|
||||
# ScanQueueMessage(
|
||||
# scan_type="xas_advanced_scan_with_xrd",
|
||||
# parameter={
|
||||
# "args": {},
|
||||
# "kwargs": {
|
||||
# "motor": "mo1_bragg",
|
||||
# "start": 8000,
|
||||
# "stop": 9000,
|
||||
# "scan_time": 1,
|
||||
# "scan_duration": 10,
|
||||
# "p_kink": 50,
|
||||
# "e_kink": 8500,
|
||||
# "xrd_enable_low": True,
|
||||
# "xrd_enable_high": False,
|
||||
# "num_trigger_low": 1,
|
||||
# "num_trigger_high": 7,
|
||||
# "exp_time_low": 1,
|
||||
# "exp_time_high": 3,
|
||||
# "cycle_low": 1,
|
||||
# "cycle_high": 5,
|
||||
# "system_config": {"file_suffix": None, "file_directory": None},
|
||||
# },
|
||||
# "num_points": 10,
|
||||
# },
|
||||
# queue="primary",
|
||||
# metadata={"RID": "test1234"},
|
||||
# ),
|
||||
# ],
|
||||
# )
|
||||
# def test_stage(mock_bragg, scan_worker_mock, msg):
|
||||
# """This test is important to check that the stage method of the device is working correctly.
|
||||
# Changing the kwargs names in the scans is tightly linked to the logic on the device, thus
|
||||
# it is important to check that the stage method is working correctly for the current implementation.
|
||||
|
||||
# Therefor, this test creates a scaninfo message using the scan.open_scan() method to always check
|
||||
# agains the currently implemented scans vs. the logic on the device"""
|
||||
# # Create a scaninfo message using scans the ScanQueueMessages above, 3 cases of fly scan; for the general case the procedure is not defined yet
|
||||
# worker = scan_worker_mock
|
||||
# scan_server = worker.parent
|
||||
# rb = RequestBlock(msg, assembler=ScanAssembler(parent=scan_server))
|
||||
# with mock.patch.object(worker, "current_instruction_queue_item"):
|
||||
# worker.scan_motors = []
|
||||
# worker.readout_priority = {
|
||||
# "monitored": [],
|
||||
# "baseline": [],
|
||||
# "async": [],
|
||||
# "continuous": [],
|
||||
# "on_request": [],
|
||||
# }
|
||||
# open_scan_msg = list(rb.scan.open_scan())[0]
|
||||
# worker._initialize_scan_info(
|
||||
# rb, open_scan_msg, msg.content["parameter"].get("num_points", 1)
|
||||
# )
|
||||
# # TODO find a better solution to this...
|
||||
# scan_status_msg = ScanStatusMessage(
|
||||
# scan_id=worker.current_scan_id,
|
||||
# status="open",
|
||||
# scan_name=worker.current_scan_info.get("scan_name"),
|
||||
# scan_number=worker.current_scan_info.get("scan_number"),
|
||||
# session_id=worker.current_scan_info.get("session_id"),
|
||||
# dataset_number=worker.current_scan_info.get("dataset_number"),
|
||||
# num_points=worker.current_scan_info.get("num_points"),
|
||||
# scan_type=worker.current_scan_info.get("scan_type"),
|
||||
# scan_report_devices=worker.current_scan_info.get("scan_report_devices"),
|
||||
# user_metadata=worker.current_scan_info.get("user_metadata"),
|
||||
# readout_priority=worker.current_scan_info.get("readout_priority"),
|
||||
# scan_parameters=worker.current_scan_info.get("scan_parameters"),
|
||||
# request_inputs=worker.current_scan_info.get("request_inputs"),
|
||||
# info=worker.current_scan_info,
|
||||
# )
|
||||
# mock_bragg.scan_info.msg = scan_status_msg
|
||||
|
||||
# # Ensure that ScanControlLoadMessage is set to SUCCESS
|
||||
# mock_bragg.scan_control.scan_msg._read_pv.mock_data = ScanControlLoadMessage.SUCCESS
|
||||
# with (
|
||||
# mock.patch.object(mock_bragg, "_check_scan_msg") as mock_check_scan_msg,
|
||||
# mock.patch.object(mock_bragg, "on_unstage"),
|
||||
# ):
|
||||
# scan_name = scan_status_msg.content["info"].get("scan_name", "")
|
||||
# # Chek the not implemented fly scan first, should raise Mo1BraggError
|
||||
# if scan_name not in [
|
||||
# "xas_simple_scan",
|
||||
# "xas_simple_scan_with_xrd",
|
||||
# "xas_advanced_scan",
|
||||
# "xas_advanced_scan_with_xrd",
|
||||
# ]:
|
||||
# with pytest.raises(Mo1BraggError):
|
||||
# mock_bragg.stage()
|
||||
# assert mock_check_scan_msg.call_count == 1
|
||||
# else:
|
||||
# with (
|
||||
# mock.patch.object(mock_bragg, "set_xas_settings") as mock_xas_settings,
|
||||
# mock.patch.object(
|
||||
# mock_bragg, "set_advanced_xas_settings"
|
||||
# ) as mock_advanced_xas_settings,
|
||||
# mock.patch.object(mock_bragg, "set_trig_settings") as mock_trig_settings,
|
||||
# mock.patch.object(
|
||||
# mock_bragg, "set_scan_control_settings"
|
||||
# ) as mock_set_scan_control_settings,
|
||||
# ):
|
||||
# # Check xas_simple_scan
|
||||
# if scan_name == "xas_simple_scan":
|
||||
# mock_bragg.stage()
|
||||
# assert mock_xas_settings.call_args == mock.call(
|
||||
# low=scan_status_msg.content["info"]["kwargs"]["start"],
|
||||
# high=scan_status_msg.content["info"]["kwargs"]["stop"],
|
||||
# scan_time=scan_status_msg.content["info"]["kwargs"]["scan_time"],
|
||||
# )
|
||||
# assert mock_trig_settings.call_args == mock.call(
|
||||
# enable_low=False,
|
||||
# enable_high=False,
|
||||
# exp_time_low=0,
|
||||
# exp_time_high=0,
|
||||
# cycle_low=0,
|
||||
# cycle_high=0,
|
||||
# )
|
||||
# assert mock_set_scan_control_settings.call_args == mock.call(
|
||||
# mode=ScanControlMode.SIMPLE,
|
||||
# scan_duration=scan_status_msg.content["info"]["kwargs"][
|
||||
# "scan_duration"
|
||||
# ],
|
||||
# )
|
||||
# # Check xas_simple_scan_with_xrd
|
||||
# elif scan_name == "xas_simple_scan_with_xrd":
|
||||
# mock_bragg.stage()
|
||||
# assert mock_xas_settings.call_args == mock.call(
|
||||
# low=scan_status_msg.content["info"]["kwargs"]["start"],
|
||||
# high=scan_status_msg.content["info"]["kwargs"]["stop"],
|
||||
# scan_time=scan_status_msg.content["info"]["kwargs"]["scan_time"],
|
||||
# )
|
||||
# assert mock_trig_settings.call_args == mock.call(
|
||||
# enable_low=scan_status_msg.content["info"]["kwargs"]["xrd_enable_low"],
|
||||
# enable_high=scan_status_msg.content["info"]["kwargs"][
|
||||
# "xrd_enable_high"
|
||||
# ],
|
||||
# exp_time_low=scan_status_msg.content["info"]["kwargs"]["exp_time_low"],
|
||||
# exp_time_high=scan_status_msg.content["info"]["kwargs"][
|
||||
# "exp_time_high"
|
||||
# ],
|
||||
# cycle_low=scan_status_msg.content["info"]["kwargs"]["cycle_low"],
|
||||
# cycle_high=scan_status_msg.content["info"]["kwargs"]["cycle_high"],
|
||||
# )
|
||||
# assert mock_set_scan_control_settings.call_args == mock.call(
|
||||
# mode=ScanControlMode.SIMPLE,
|
||||
# scan_duration=scan_status_msg.content["info"]["kwargs"][
|
||||
# "scan_duration"
|
||||
# ],
|
||||
# )
|
||||
# # Check xas_advanced_scan
|
||||
# elif scan_name == "xas_advanced_scan":
|
||||
# mock_bragg.stage()
|
||||
# assert mock_advanced_xas_settings.call_args == mock.call(
|
||||
# low=scan_status_msg.content["info"]["kwargs"]["start"],
|
||||
# high=scan_status_msg.content["info"]["kwargs"]["stop"],
|
||||
# scan_time=scan_status_msg.content["info"]["kwargs"]["scan_time"],
|
||||
# p_kink=scan_status_msg.content["info"]["kwargs"]["p_kink"],
|
||||
# e_kink=scan_status_msg.content["info"]["kwargs"]["e_kink"],
|
||||
# )
|
||||
# assert mock_trig_settings.call_args == mock.call(
|
||||
# enable_low=False,
|
||||
# enable_high=False,
|
||||
# exp_time_low=0,
|
||||
# exp_time_high=0,
|
||||
# cycle_low=0,
|
||||
# cycle_high=0,
|
||||
# )
|
||||
# assert mock_set_scan_control_settings.call_args == mock.call(
|
||||
# mode=ScanControlMode.ADVANCED,
|
||||
# scan_duration=scan_status_msg.content["info"]["kwargs"][
|
||||
# "scan_duration"
|
||||
# ],
|
||||
# )
|
||||
# # Check xas_advanced_scan_with_xrd
|
||||
# elif scan_name == "xas_advanced_scan_with_xrd":
|
||||
# mock_bragg.stage()
|
||||
# assert mock_advanced_xas_settings.call_args == mock.call(
|
||||
# low=scan_status_msg.content["info"]["kwargs"]["start"],
|
||||
# high=scan_status_msg.content["info"]["kwargs"]["stop"],
|
||||
# scan_time=scan_status_msg.content["info"]["kwargs"]["scan_time"],
|
||||
# p_kink=scan_status_msg.content["info"]["kwargs"]["p_kink"],
|
||||
# e_kink=scan_status_msg.content["info"]["kwargs"]["e_kink"],
|
||||
# )
|
||||
# assert mock_trig_settings.call_args == mock.call(
|
||||
# enable_low=scan_status_msg.content["info"]["kwargs"]["xrd_enable_low"],
|
||||
# enable_high=scan_status_msg.content["info"]["kwargs"][
|
||||
# "xrd_enable_high"
|
||||
# ],
|
||||
# exp_time_low=scan_status_msg.content["info"]["kwargs"]["exp_time_low"],
|
||||
# exp_time_high=scan_status_msg.content["info"]["kwargs"][
|
||||
# "exp_time_high"
|
||||
# ],
|
||||
# cycle_low=scan_status_msg.content["info"]["kwargs"]["cycle_low"],
|
||||
# cycle_high=scan_status_msg.content["info"]["kwargs"]["cycle_high"],
|
||||
# )
|
||||
# assert mock_set_scan_control_settings.call_args == mock.call(
|
||||
# mode=ScanControlMode.ADVANCED,
|
||||
# scan_duration=scan_status_msg.content["info"]["kwargs"][
|
||||
# "scan_duration"
|
||||
# ],
|
||||
# )
|
||||
88
tests/tests_devices/test_mo1_bragg_angle.py
Normal file
88
tests/tests_devices/test_mo1_bragg_angle.py
Normal file
@@ -0,0 +1,88 @@
|
||||
"""Tests for the Mo1BraggAngle class."""
|
||||
|
||||
import threading
|
||||
from unittest import mock
|
||||
|
||||
import ophyd
|
||||
import pytest
|
||||
from ophyd_devices.tests.utils import MockPV, patch_dual_pvs
|
||||
|
||||
from debye_bec.devices.mo1_bragg.mo1_bragg_angle import Mo1BraggAngle
|
||||
from debye_bec.devices.mo1_bragg.mo1_bragg_devices import Mo1BraggStoppedError
|
||||
|
||||
# pylint: disable=protected-access
|
||||
|
||||
|
||||
@pytest.fixture(scope="function")
|
||||
def mock_bragg() -> Mo1BraggAngle:
|
||||
"""Fixture for the Mo1BraggAngle device."""
|
||||
name = "bragg"
|
||||
prefix = "X01DA-OP-MO1:BRAGG:"
|
||||
with mock.patch.object(ophyd, "cl") as mock_cl:
|
||||
mock_cl.get_pv = MockPV
|
||||
mock_cl.thread_class = threading.Thread
|
||||
dev = Mo1BraggAngle(name=name, prefix=prefix)
|
||||
patch_dual_pvs(dev)
|
||||
yield dev
|
||||
|
||||
|
||||
def test_mo1_bragg_angle_init(mock_bragg):
|
||||
"""Test the initialization of the Mo1BraggAngle device."""
|
||||
assert mock_bragg.name == "bragg"
|
||||
assert mock_bragg.prefix == "X01DA-OP-MO1:BRAGG:"
|
||||
assert isinstance(mock_bragg.readback, ophyd.EpicsSignalRO)
|
||||
assert isinstance(mock_bragg.setpoint, ophyd.EpicsSignalWithRBV)
|
||||
assert isinstance(mock_bragg.low_lim, ophyd.EpicsSignalRO)
|
||||
assert isinstance(mock_bragg.high_lim, ophyd.EpicsSignalRO)
|
||||
|
||||
|
||||
def test_mo1_bragg_angle_egu(mock_bragg):
|
||||
"""Test the engineering unit of the Mo1BraggAngle device."""
|
||||
assert mock_bragg.egu == "deg"
|
||||
|
||||
|
||||
def test_mo1_bragg_angle_limits(mock_bragg):
|
||||
"""Test the limits of the Mo1BraggAngle device."""
|
||||
mock_bragg.low_lim._read_pv.mock_data = -10
|
||||
mock_bragg.high_lim._read_pv.mock_data = 10
|
||||
|
||||
assert mock_bragg.limits == (-10, 10)
|
||||
|
||||
|
||||
def test_mo1_bragg_angle_move(mock_bragg):
|
||||
"""Test the move method of the Mo1BraggAngle device."""
|
||||
mock_bragg.setpoint.put(0)
|
||||
mock_bragg.readback._read_pv.mock_data = 0 # EpicsSignalRO
|
||||
|
||||
# Change PV for motor is moving before starting the move
|
||||
mock_bragg.motor_is_moving._read_pv.mock_data = 0 # EpicsSignalRO
|
||||
status = mock_bragg.move(5)
|
||||
assert status.done is False
|
||||
|
||||
# Check setpoint is set correctly
|
||||
assert mock_bragg.setpoint.get() == 5
|
||||
|
||||
# Update the motor is moving PV to simulate that the move is done
|
||||
mock_bragg.motor_is_moving._read_pv.mock_data = 1
|
||||
assert mock_bragg.motor_is_moving.get() == 1
|
||||
|
||||
status.wait(timeout=5) # If the status does not resolve after 5 seconds, something is wrong
|
||||
assert status.done is True
|
||||
|
||||
|
||||
def test_mo1_bragg_angle_stop(mock_bragg):
|
||||
"""Test the stop method of the Mo1BraggAngle device."""
|
||||
assert mock_bragg.stopped is False
|
||||
|
||||
mock_bragg.stop()
|
||||
assert mock_bragg.stopped is True
|
||||
|
||||
status = mock_bragg.move(5)
|
||||
assert status.done is False
|
||||
|
||||
# stopped should be resetted
|
||||
assert mock_bragg.stopped is False
|
||||
|
||||
with pytest.raises(Mo1BraggStoppedError):
|
||||
mock_bragg.stop()
|
||||
status.wait(timeout=5) # This should raise before due to stop() call
|
||||
152
tests/tests_devices/test_mo1_bragg_utils.py
Normal file
152
tests/tests_devices/test_mo1_bragg_utils.py
Normal file
@@ -0,0 +1,152 @@
|
||||
# pylint: skip-file
|
||||
import numpy as np
|
||||
|
||||
import debye_bec.devices.mo1_bragg.mo1_bragg_utils as utils
|
||||
|
||||
|
||||
def test_compute_spline():
|
||||
p, v, dt = utils.compute_spline(
|
||||
low_deg=10, high_deg=12, p_kink=50, e_kink_deg=11, scan_time=0.5
|
||||
)
|
||||
|
||||
rtol = 1e-6
|
||||
atol = 1e-3
|
||||
p_desired = [
|
||||
9.98,
|
||||
9.98376125,
|
||||
9.99479,
|
||||
10.01270375,
|
||||
10.03712,
|
||||
10.06765625,
|
||||
10.10393,
|
||||
10.14555875,
|
||||
10.19216,
|
||||
10.24335125,
|
||||
10.29875,
|
||||
10.35797375,
|
||||
10.42064,
|
||||
10.48636625,
|
||||
10.55477,
|
||||
10.62546875,
|
||||
10.69808,
|
||||
10.77222125,
|
||||
10.84751,
|
||||
10.92356375,
|
||||
11.0,
|
||||
11.07643625,
|
||||
11.15249,
|
||||
11.22777875,
|
||||
11.30192,
|
||||
11.37453125,
|
||||
11.44523,
|
||||
11.51363375,
|
||||
11.57936,
|
||||
11.64202625,
|
||||
11.70125,
|
||||
11.75664875,
|
||||
11.80784,
|
||||
11.85444125,
|
||||
11.89607,
|
||||
11.93234375,
|
||||
11.96288,
|
||||
11.98729625,
|
||||
12.00521,
|
||||
12.01623875,
|
||||
12.02,
|
||||
]
|
||||
v_desired = [
|
||||
0.0,
|
||||
1.50156441,
|
||||
2.35715667,
|
||||
2.90783907,
|
||||
3.29035796,
|
||||
3.57019636,
|
||||
3.78263174,
|
||||
3.9483388,
|
||||
4.08022441,
|
||||
4.18675043,
|
||||
4.27368333,
|
||||
4.34507577,
|
||||
4.40384627,
|
||||
4.45213618,
|
||||
4.49153736,
|
||||
4.52324148,
|
||||
4.54814006,
|
||||
4.5668924,
|
||||
4.57997194,
|
||||
4.58769736,
|
||||
4.59025246,
|
||||
4.58769736,
|
||||
4.57997194,
|
||||
4.5668924,
|
||||
4.54814006,
|
||||
4.52324148,
|
||||
4.49153736,
|
||||
4.45213618,
|
||||
4.40384627,
|
||||
4.34507577,
|
||||
4.27368333,
|
||||
4.18675043,
|
||||
4.08022441,
|
||||
3.9483388,
|
||||
3.78263174,
|
||||
3.57019636,
|
||||
3.29035796,
|
||||
2.90783907,
|
||||
2.35715667,
|
||||
1.50156441,
|
||||
0.0,
|
||||
]
|
||||
dt_desired = [
|
||||
0.0,
|
||||
4.34081063,
|
||||
5.57222438,
|
||||
6.73882688,
|
||||
7.84061813,
|
||||
8.87759812,
|
||||
9.84976688,
|
||||
10.75712437,
|
||||
11.59967063,
|
||||
12.37740563,
|
||||
13.09032937,
|
||||
13.73844188,
|
||||
14.32174313,
|
||||
14.84023312,
|
||||
15.29391188,
|
||||
15.68277937,
|
||||
16.00683562,
|
||||
16.26608063,
|
||||
16.46051438,
|
||||
16.59013687,
|
||||
16.65494813,
|
||||
16.65494813,
|
||||
16.59013687,
|
||||
16.46051438,
|
||||
16.26608063,
|
||||
16.00683562,
|
||||
15.68277938,
|
||||
15.29391188,
|
||||
14.84023312,
|
||||
14.32174313,
|
||||
13.73844187,
|
||||
13.09032938,
|
||||
12.37740562,
|
||||
11.59967063,
|
||||
10.75712437,
|
||||
9.84976687,
|
||||
8.87759813,
|
||||
7.84061812,
|
||||
6.73882688,
|
||||
5.57222437,
|
||||
4.34081063,
|
||||
]
|
||||
|
||||
np.testing.assert_allclose(p, p_desired, rtol, atol)
|
||||
np.testing.assert_allclose(v, v_desired, rtol, atol)
|
||||
np.testing.assert_allclose(dt, dt_desired, rtol, atol)
|
||||
|
||||
assert utils.SAFETY_FACTOR == 0.025
|
||||
assert utils.N_SAMPLES == 41
|
||||
assert utils.DEGREE_SPLINE == 3
|
||||
assert utils.TIME_COMPENSATE_SPLINE == 0.0062
|
||||
assert utils.POSITION_COMPONSATION == 0.02
|
||||
167
tests/tests_devices/test_nidaq.py
Normal file
167
tests/tests_devices/test_nidaq.py
Normal file
@@ -0,0 +1,167 @@
|
||||
# pylint: skip-file
|
||||
import threading
|
||||
from typing import Generator
|
||||
from unittest import mock
|
||||
|
||||
import ophyd
|
||||
import pytest
|
||||
from bec_server.scan_server.scan_worker import ScanWorker
|
||||
from ophyd.status import WaitTimeoutError
|
||||
from ophyd_devices.interfaces.base_classes.psi_device_base import DeviceStoppedError
|
||||
from ophyd_devices.tests.utils import MockPV
|
||||
|
||||
# from bec_server.device_server.tests.utils import DMMock
|
||||
from debye_bec.devices.nidaq.nidaq import Nidaq, NidaqError
|
||||
|
||||
# TODO move this function to ophyd_devices, it is duplicated in csaxs_bec and needed for other pluging repositories
|
||||
from debye_bec.devices.test_utils.utils import patch_dual_pvs
|
||||
|
||||
|
||||
@pytest.fixture(scope="function")
|
||||
def scan_worker_mock(scan_server_mock):
|
||||
"""Scan worker fixture, utility to generate scan_info for a given scan name."""
|
||||
scan_server_mock.device_manager.connector = mock.MagicMock()
|
||||
scan_worker = ScanWorker(parent=scan_server_mock)
|
||||
yield scan_worker
|
||||
|
||||
|
||||
@pytest.fixture(scope="function")
|
||||
def mock_nidaq() -> Generator[Nidaq, None, None]:
|
||||
"""Fixture for the Nidaq device."""
|
||||
name = "nidaq"
|
||||
prefix = "nidaq:prefix_test:"
|
||||
with mock.patch.object(ophyd, "cl") as mock_cl:
|
||||
mock_cl.get_pv = MockPV
|
||||
mock_cl.thread_class = threading.Thread
|
||||
dev = Nidaq(name=name, prefix=prefix)
|
||||
patch_dual_pvs(dev)
|
||||
yield dev
|
||||
|
||||
|
||||
def test_init(mock_nidaq):
|
||||
"""Test the initialization of the Nidaq device."""
|
||||
dev = mock_nidaq
|
||||
assert dev.name == "nidaq"
|
||||
assert dev.prefix == "nidaq:prefix_test:"
|
||||
assert dev.valid_scan_names == [
|
||||
"xas_simple_scan",
|
||||
"xas_simple_scan_with_xrd",
|
||||
"xas_advanced_scan",
|
||||
"xas_advanced_scan_with_xrd",
|
||||
"nidaq_continuous_scan",
|
||||
]
|
||||
|
||||
|
||||
def test_check_if_scan_name_is_valid(mock_nidaq):
|
||||
"""Test the check_if_scan_name_is_valid method."""
|
||||
dev = mock_nidaq
|
||||
dev.scan_info.msg.scan_name = "xas_simple_scan"
|
||||
assert dev._check_if_scan_name_is_valid()
|
||||
dev.scan_info.msg.scan_name = "invalid_scan_name"
|
||||
assert not dev._check_if_scan_name_is_valid()
|
||||
|
||||
|
||||
def test_set_config(mock_nidaq):
|
||||
dev = mock_nidaq
|
||||
# TODO #21 Add test logic for set_config, issue created #
|
||||
|
||||
|
||||
def test_on_connected(mock_nidaq):
|
||||
"""Test the on_connected method of the Nidaq device."""
|
||||
dev = mock_nidaq
|
||||
dev.power.put(0)
|
||||
dev.heartbeat._read_pv.mock_data = 0
|
||||
# First scenario, raise timeout error
|
||||
|
||||
# This will raise a WaitTimeoutError error as we currently do not support callbacks in the MockPV
|
||||
dev.timeout_wait_for_signal = 0.1
|
||||
# To check that it raised, we check that dev.power PV is set to 1
|
||||
# Set state PV to 0, 1 is expected value
|
||||
dev.state._read_pv.mock_data = 0
|
||||
with pytest.raises(WaitTimeoutError):
|
||||
dev.on_connected()
|
||||
assert dev.power.get() == 1
|
||||
# TODO, once the MOCKPv supports callbacks, we can test the rest of the logic issue #22
|
||||
|
||||
|
||||
# def test_on_stage(mock_nidaq):
|
||||
# dev = mock_nidaq
|
||||
# #TODO Add once MockPV supports callbacks #22
|
||||
|
||||
|
||||
def test_on_kickoff(mock_nidaq):
|
||||
"""Test the on_kickoff method of the Nidaq device."""
|
||||
dev = mock_nidaq
|
||||
dev.kickoff_call.put(0)
|
||||
dev.kickoff()
|
||||
assert dev.kickoff_call.get() == 1
|
||||
|
||||
|
||||
def test_on_unstage(mock_nidaq):
|
||||
"""Test the on_unstage method of the Nidaq device."""
|
||||
dev = mock_nidaq
|
||||
dev.state._read_pv.mock_data = 0 # Set state to 0, 1 is Standby
|
||||
dev._timeout_wait_for_pv = 0.1 # Set a short timeout for testing
|
||||
dev.enable_compression._read_pv.mock_data = 0 # Compression enabled
|
||||
with pytest.raises(NidaqError):
|
||||
dev.on_unstage()
|
||||
dev.state._read_pv.mock_data = 1
|
||||
dev.on_unstage()
|
||||
assert dev.enable_compression.get() == 1
|
||||
|
||||
|
||||
@pytest.mark.parametrize(
|
||||
["scan_name", "raise_error", "nidaq_state"],
|
||||
[
|
||||
("line_scan", False, 0),
|
||||
("xas_simple_scan", False, 3),
|
||||
("xas_simple_scan", True, 0),
|
||||
("nidaq_continuous_scan", False, 0),
|
||||
],
|
||||
)
|
||||
def test_on_pre_scan(mock_nidaq, scan_name, raise_error, nidaq_state):
|
||||
"""Test the on_pre_scan method of the Nidaq device."""
|
||||
dev = mock_nidaq
|
||||
dev.state.put(nidaq_state)
|
||||
dev.scan_info.msg.scan_name = scan_name
|
||||
dev._timeout_wait_for_pv = 0.1 # Set a short timeout for testing
|
||||
if not raise_error:
|
||||
dev.pre_scan()
|
||||
else:
|
||||
with pytest.raises(NidaqError):
|
||||
dev.pre_scan()
|
||||
|
||||
|
||||
def test_on_complete(mock_nidaq):
|
||||
"""Test the on_complete method of the Nidaq device."""
|
||||
dev = mock_nidaq
|
||||
# Check for nidaq_continuous_scan
|
||||
dev.scan_info.msg.scan_name = "nidaq_continuous_scan"
|
||||
dev.state.put(0) # Set state to DISABLED
|
||||
status = dev.complete()
|
||||
assert status.done is False
|
||||
dev.state.put(1)
|
||||
# Should resolve now
|
||||
status.wait(timeout=5) # Wait for the status to complete
|
||||
assert status.done is True
|
||||
|
||||
# Check for XAS simple scan
|
||||
dev.scan_info.msg.scan_name = "xas_simple_scan"
|
||||
dev.state.put(0) # Set state to ACQUIRE
|
||||
dev.stop_call.put(0)
|
||||
dev._timeout_wait_for_pv = 5
|
||||
status = dev.on_complete()
|
||||
assert status.done is False
|
||||
assert dev.stop_call.get() == 1 # Should have called stop
|
||||
dev.state.put(1) # Set state to STANDBY
|
||||
# Should resolve now
|
||||
status.wait(timeout=5) # Wait for the status to complete
|
||||
assert status.done is True
|
||||
|
||||
# Test that it resolves if device is stopped
|
||||
dev.state.put(0) # Set state to DISABLED
|
||||
dev.stopped = True # Reset stopped state
|
||||
status = dev.on_complete()
|
||||
with pytest.raises(NidaqError):
|
||||
status.wait(timeout=5)
|
||||
assert status.done is True
|
||||
34
tests/tests_file_writer/README.md
Normal file
34
tests/tests_file_writer/README.md
Normal file
@@ -0,0 +1,34 @@
|
||||
# Getting Started with Testing using pytest
|
||||
|
||||
BEC is using the [pytest](https://docs.pytest.org/en/latest/) framework.
|
||||
It can be installed via
|
||||
|
||||
```bash
|
||||
pip install pytest
|
||||
```
|
||||
|
||||
in your _python environment_.
|
||||
We note that pytest is part of the optional-dependencies `[dev]` of the plugin package.
|
||||
|
||||
## Introduction
|
||||
|
||||
Tests in this package should be stored in the `tests` directory.
|
||||
We suggest to sort tests of different submodules, i.e. `scans` or `devices` in the respective folder structure, and to folow a naming convention of `<test_module_name.py>`.
|
||||
It is mandatory for test files to begin with `test_` for pytest to discover them.
|
||||
|
||||
To run all tests, navigate to the directory of the plugin from the command line, and run the command
|
||||
|
||||
```bash
|
||||
pytest -v --random-order ./tests
|
||||
```
|
||||
|
||||
Note, the python environment needs to be active.
|
||||
The additional arg `-v` allows pytest to run in verbose mode which provides more detailed information about the tests being run.
|
||||
The argument `--random-order` instructs pytest to run the tests in random order, which is the default in the CI pipelines.
|
||||
|
||||
## Test examples
|
||||
|
||||
Writing tests can be quite specific for the given function.
|
||||
We recommend writing tests as isolated as possible, i.e. try to test single functions instead of full classes.
|
||||
A very useful class to enable isolated testing is [MagicMock](https://docs.python.org/3/library/unittest.mock.html).
|
||||
In addition, we also recommend to take a look at the [How-to guides from pytest](https://docs.pytest.org/en/8.0.x/how-to/index.html).
|
||||
34
tests/tests_scans/README.md
Normal file
34
tests/tests_scans/README.md
Normal file
@@ -0,0 +1,34 @@
|
||||
# Getting Started with Testing using pytest
|
||||
|
||||
BEC is using the [pytest](https://docs.pytest.org/en/latest/) framework.
|
||||
It can be installed via
|
||||
|
||||
```bash
|
||||
pip install pytest
|
||||
```
|
||||
|
||||
in your _python environment_.
|
||||
We note that pytest is part of the optional-dependencies `[dev]` of the plugin package.
|
||||
|
||||
## Introduction
|
||||
|
||||
Tests in this package should be stored in the `tests` directory.
|
||||
We suggest to sort tests of different submodules, i.e. `scans` or `devices` in the respective folder structure, and to folow a naming convention of `<test_module_name.py>`.
|
||||
It is mandatory for test files to begin with `test_` for pytest to discover them.
|
||||
|
||||
To run all tests, navigate to the directory of the plugin from the command line, and run the command
|
||||
|
||||
```bash
|
||||
pytest -v --random-order ./tests
|
||||
```
|
||||
|
||||
Note, the python environment needs to be active.
|
||||
The additional arg `-v` allows pytest to run in verbose mode which provides more detailed information about the tests being run.
|
||||
The argument `--random-order` instructs pytest to run the tests in random order, which is the default in the CI pipelines.
|
||||
|
||||
## Test examples
|
||||
|
||||
Writing tests can be quite specific for the given function.
|
||||
We recommend writing tests as isolated as possible, i.e. try to test single functions instead of full classes.
|
||||
A very useful class to enable isolated testing is [MagicMock](https://docs.python.org/3/library/unittest.mock.html).
|
||||
In addition, we also recommend to take a look at the [How-to guides from pytest](https://docs.pytest.org/en/8.0.x/how-to/index.html).
|
||||
36
tests/tests_scans/conftest.py
Normal file
36
tests/tests_scans/conftest.py
Normal file
@@ -0,0 +1,36 @@
|
||||
# pylint: skip-file
|
||||
from functools import partial
|
||||
|
||||
import pytest
|
||||
from bec_server.device_server.tests.utils import DeviceMockType, DMMock
|
||||
from bec_server.scan_server.tests.fixtures import (
|
||||
ScanStubStatusMock,
|
||||
connector_mock,
|
||||
instruction_handler_mock,
|
||||
)
|
||||
|
||||
|
||||
@pytest.fixture
|
||||
def device_manager_mock():
|
||||
device_manager = DMMock()
|
||||
device_manager.add_device(
|
||||
"mo1_bragg", dev_type=DeviceMockType.POSITIONER, readout_priority="monitored"
|
||||
)
|
||||
device_manager.add_device("samx")
|
||||
device_manager.add_device(
|
||||
"eiger", dev_type=DeviceMockType.SIGNAL, readout_priority="monitored", software_trigger=True
|
||||
)
|
||||
device_manager.add_device("bpm4i", dev_type=DeviceMockType.SIGNAL, readout_priority="monitored")
|
||||
yield device_manager
|
||||
|
||||
|
||||
@pytest.fixture
|
||||
def scan_assembler(instruction_handler_mock, device_manager_mock):
|
||||
def _assemble_scan(scan_class, *args, **kwargs):
|
||||
return scan_class(*args, **kwargs)
|
||||
|
||||
return partial(
|
||||
_assemble_scan,
|
||||
instruction_handler=instruction_handler_mock,
|
||||
device_manager=device_manager_mock,
|
||||
)
|
||||
432
tests/tests_scans/test_mono_bragg_scans.py
Normal file
432
tests/tests_scans/test_mono_bragg_scans.py
Normal file
@@ -0,0 +1,432 @@
|
||||
# pylint: skip-file
|
||||
from unittest import mock
|
||||
|
||||
from bec_lib.messages import DeviceInstructionMessage
|
||||
from bec_server.device_server.tests.utils import DMMock
|
||||
|
||||
from debye_bec.scans import (
|
||||
XASAdvancedScan,
|
||||
XASAdvancedScanWithXRD,
|
||||
XASSimpleScan,
|
||||
XASSimpleScanWithXRD,
|
||||
)
|
||||
|
||||
|
||||
def get_instructions(request, ScanStubStatusMock):
|
||||
request.metadata["RID"] = "my_test_request_id"
|
||||
|
||||
def fake_done():
|
||||
"""
|
||||
Fake done function for ScanStubStatusMock. Upon each call, it returns the next value from the generator.
|
||||
This is used to simulate the completion of the scan.
|
||||
"""
|
||||
yield False
|
||||
yield False
|
||||
yield True
|
||||
|
||||
def fake_complete(*args, **kwargs):
|
||||
yield "fake_complete"
|
||||
return ScanStubStatusMock(done_func=fake_done)
|
||||
|
||||
with (
|
||||
mock.patch.object(request.stubs, "complete", side_effect=fake_complete),
|
||||
mock.patch.object(request.stubs, "_get_result_from_status", return_value=None),
|
||||
):
|
||||
reference_commands = list(request.run())
|
||||
|
||||
for cmd in reference_commands:
|
||||
if not cmd or isinstance(cmd, str):
|
||||
continue
|
||||
if "RID" in cmd.metadata:
|
||||
cmd.metadata["RID"] = "my_test_request_id"
|
||||
if "rpc_id" in cmd.parameter:
|
||||
cmd.parameter["rpc_id"] = "my_test_rpc_id"
|
||||
cmd.metadata.pop("device_instr_id", None)
|
||||
|
||||
return reference_commands
|
||||
|
||||
|
||||
def test_xas_simple_scan(scan_assembler, ScanStubStatusMock):
|
||||
|
||||
request = scan_assembler(XASSimpleScan, start=0, stop=5, scan_time=1, scan_duration=10)
|
||||
request.device_manager.add_device("nidaq")
|
||||
reference_commands = get_instructions(request, ScanStubStatusMock)
|
||||
|
||||
assert reference_commands == [
|
||||
None,
|
||||
None,
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=None,
|
||||
action="scan_report_instruction",
|
||||
parameter={"device_progress": ["mo1_bragg"]},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=None,
|
||||
action="open_scan",
|
||||
parameter={
|
||||
"scan_motors": [],
|
||||
"readout_priority": {
|
||||
"monitored": [],
|
||||
"baseline": [],
|
||||
"on_request": [],
|
||||
"async": ["nidaq"],
|
||||
},
|
||||
"num_points": None,
|
||||
"positions": [0.0, 5.0],
|
||||
"scan_name": "xas_simple_scan",
|
||||
"scan_type": "fly",
|
||||
},
|
||||
),
|
||||
DeviceInstructionMessage(metadata={}, device="nidaq", action="stage", parameter={}),
|
||||
DeviceInstructionMessage(
|
||||
metadata={},
|
||||
device=["bpm4i", "eiger", "mo1_bragg", "samx"],
|
||||
action="stage",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "baseline", "RID": "my_test_request_id"},
|
||||
device=["samx"],
|
||||
action="read",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=["bpm4i", "eiger", "mo1_bragg", "nidaq", "samx"],
|
||||
action="pre_scan",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device="mo1_bragg",
|
||||
action="kickoff",
|
||||
parameter={"configure": {}},
|
||||
),
|
||||
"fake_complete",
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id", "point_id": 0},
|
||||
device=["bpm4i", "eiger", "mo1_bragg"],
|
||||
action="read",
|
||||
parameter={"group": "monitored"},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id", "point_id": 1},
|
||||
device=["bpm4i", "eiger", "mo1_bragg"],
|
||||
action="read",
|
||||
parameter={"group": "monitored"},
|
||||
),
|
||||
"fake_complete",
|
||||
DeviceInstructionMessage(
|
||||
metadata={},
|
||||
device=["bpm4i", "eiger", "mo1_bragg", "nidaq", "samx"],
|
||||
action="unstage",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=None,
|
||||
action="close_scan",
|
||||
parameter={},
|
||||
),
|
||||
]
|
||||
|
||||
|
||||
def test_xas_simple_scan_with_xrd(scan_assembler, ScanStubStatusMock):
|
||||
|
||||
request = scan_assembler(
|
||||
XASSimpleScanWithXRD,
|
||||
start=0,
|
||||
stop=5,
|
||||
scan_time=1,
|
||||
scan_duration=10,
|
||||
xrd_enable_low=True,
|
||||
num_trigger_low=1,
|
||||
exp_time_low=1,
|
||||
cycle_low=1,
|
||||
xrd_enable_high=True,
|
||||
num_trigger_high=2,
|
||||
exp_time_high=3,
|
||||
cycle_high=4,
|
||||
)
|
||||
request.device_manager.add_device("nidaq")
|
||||
reference_commands = get_instructions(request, ScanStubStatusMock)
|
||||
|
||||
assert reference_commands == [
|
||||
None,
|
||||
None,
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=None,
|
||||
action="scan_report_instruction",
|
||||
parameter={"device_progress": ["mo1_bragg"]},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=None,
|
||||
action="open_scan",
|
||||
parameter={
|
||||
"scan_motors": [],
|
||||
"readout_priority": {
|
||||
"monitored": [],
|
||||
"baseline": [],
|
||||
"on_request": [],
|
||||
"async": ["nidaq"],
|
||||
},
|
||||
"num_points": None,
|
||||
"positions": [0.0, 5.0],
|
||||
"scan_name": "xas_simple_scan_with_xrd",
|
||||
"scan_type": "fly",
|
||||
},
|
||||
),
|
||||
DeviceInstructionMessage(metadata={}, device="nidaq", action="stage", parameter={}),
|
||||
DeviceInstructionMessage(
|
||||
metadata={},
|
||||
device=["bpm4i", "eiger", "mo1_bragg", "samx"],
|
||||
action="stage",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "baseline", "RID": "my_test_request_id"},
|
||||
device=["samx"],
|
||||
action="read",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=["bpm4i", "eiger", "mo1_bragg", "nidaq", "samx"],
|
||||
action="pre_scan",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device="mo1_bragg",
|
||||
action="kickoff",
|
||||
parameter={"configure": {}},
|
||||
),
|
||||
"fake_complete",
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id", "point_id": 0},
|
||||
device=["bpm4i", "eiger", "mo1_bragg"],
|
||||
action="read",
|
||||
parameter={"group": "monitored"},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id", "point_id": 1},
|
||||
device=["bpm4i", "eiger", "mo1_bragg"],
|
||||
action="read",
|
||||
parameter={"group": "monitored"},
|
||||
),
|
||||
"fake_complete",
|
||||
DeviceInstructionMessage(
|
||||
metadata={},
|
||||
device=["bpm4i", "eiger", "mo1_bragg", "nidaq", "samx"],
|
||||
action="unstage",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=None,
|
||||
action="close_scan",
|
||||
parameter={},
|
||||
),
|
||||
]
|
||||
|
||||
|
||||
def test_xas_advanced_scan(scan_assembler, ScanStubStatusMock):
|
||||
|
||||
request = scan_assembler(
|
||||
XASAdvancedScan,
|
||||
start=8000,
|
||||
stop=9000,
|
||||
scan_time=1,
|
||||
scan_duration=10,
|
||||
p_kink=50,
|
||||
e_kink=8500,
|
||||
)
|
||||
request.device_manager.add_device("nidaq")
|
||||
reference_commands = get_instructions(request, ScanStubStatusMock)
|
||||
|
||||
assert reference_commands == [
|
||||
None,
|
||||
None,
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=None,
|
||||
action="scan_report_instruction",
|
||||
parameter={"device_progress": ["mo1_bragg"]},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=None,
|
||||
action="open_scan",
|
||||
parameter={
|
||||
"scan_motors": [],
|
||||
"readout_priority": {
|
||||
"monitored": [],
|
||||
"baseline": [],
|
||||
"on_request": [],
|
||||
"async": ["nidaq"],
|
||||
},
|
||||
"num_points": None,
|
||||
"positions": [8000.0, 9000.0],
|
||||
"scan_name": "xas_advanced_scan",
|
||||
"scan_type": "fly",
|
||||
},
|
||||
),
|
||||
DeviceInstructionMessage(metadata={}, device="nidaq", action="stage", parameter={}),
|
||||
DeviceInstructionMessage(
|
||||
metadata={},
|
||||
device=["bpm4i", "eiger", "mo1_bragg", "samx"],
|
||||
action="stage",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "baseline", "RID": "my_test_request_id"},
|
||||
device=["samx"],
|
||||
action="read",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=["bpm4i", "eiger", "mo1_bragg", "nidaq", "samx"],
|
||||
action="pre_scan",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device="mo1_bragg",
|
||||
action="kickoff",
|
||||
parameter={"configure": {}},
|
||||
),
|
||||
"fake_complete",
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id", "point_id": 0},
|
||||
device=["bpm4i", "eiger", "mo1_bragg"],
|
||||
action="read",
|
||||
parameter={"group": "monitored"},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id", "point_id": 1},
|
||||
device=["bpm4i", "eiger", "mo1_bragg"],
|
||||
action="read",
|
||||
parameter={"group": "monitored"},
|
||||
),
|
||||
"fake_complete",
|
||||
DeviceInstructionMessage(
|
||||
metadata={},
|
||||
device=["bpm4i", "eiger", "mo1_bragg", "nidaq", "samx"],
|
||||
action="unstage",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=None,
|
||||
action="close_scan",
|
||||
parameter={},
|
||||
),
|
||||
]
|
||||
|
||||
|
||||
def test_xas_advanced_scan_with_xrd(scan_assembler, ScanStubStatusMock):
|
||||
|
||||
request = scan_assembler(
|
||||
XASAdvancedScanWithXRD,
|
||||
start=8000,
|
||||
stop=9000,
|
||||
scan_time=1,
|
||||
scan_duration=10,
|
||||
p_kink=50,
|
||||
e_kink=8500,
|
||||
xrd_enable_low=True,
|
||||
num_trigger_low=1,
|
||||
exp_time_low=1,
|
||||
cycle_low=1,
|
||||
xrd_enable_high=True,
|
||||
num_trigger_high=2,
|
||||
exp_time_high=3,
|
||||
cycle_high=4,
|
||||
)
|
||||
request.device_manager.add_device("nidaq")
|
||||
reference_commands = get_instructions(request, ScanStubStatusMock)
|
||||
|
||||
assert reference_commands == [
|
||||
None,
|
||||
None,
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=None,
|
||||
action="scan_report_instruction",
|
||||
parameter={"device_progress": ["mo1_bragg"]},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=None,
|
||||
action="open_scan",
|
||||
parameter={
|
||||
"scan_motors": [],
|
||||
"readout_priority": {
|
||||
"monitored": [],
|
||||
"baseline": [],
|
||||
"on_request": [],
|
||||
"async": ["nidaq"],
|
||||
},
|
||||
"num_points": None,
|
||||
"positions": [8000.0, 9000.0],
|
||||
"scan_name": "xas_advanced_scan_with_xrd",
|
||||
"scan_type": "fly",
|
||||
},
|
||||
),
|
||||
DeviceInstructionMessage(metadata={}, device="nidaq", action="stage", parameter={}),
|
||||
DeviceInstructionMessage(
|
||||
metadata={},
|
||||
device=["bpm4i", "eiger", "mo1_bragg", "samx"],
|
||||
action="stage",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "baseline", "RID": "my_test_request_id"},
|
||||
device=["samx"],
|
||||
action="read",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=["bpm4i", "eiger", "mo1_bragg", "nidaq", "samx"],
|
||||
action="pre_scan",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device="mo1_bragg",
|
||||
action="kickoff",
|
||||
parameter={"configure": {}},
|
||||
),
|
||||
"fake_complete",
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id", "point_id": 0},
|
||||
device=["bpm4i", "eiger", "mo1_bragg"],
|
||||
action="read",
|
||||
parameter={"group": "monitored"},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id", "point_id": 1},
|
||||
device=["bpm4i", "eiger", "mo1_bragg"],
|
||||
action="read",
|
||||
parameter={"group": "monitored"},
|
||||
),
|
||||
"fake_complete",
|
||||
DeviceInstructionMessage(
|
||||
metadata={},
|
||||
device=["bpm4i", "eiger", "mo1_bragg", "nidaq", "samx"],
|
||||
action="unstage",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=None,
|
||||
action="close_scan",
|
||||
parameter={},
|
||||
),
|
||||
]
|
||||
127
tests/tests_scans/test_nidaq_continous_scan.py
Normal file
127
tests/tests_scans/test_nidaq_continous_scan.py
Normal file
@@ -0,0 +1,127 @@
|
||||
# pylint: skip-file
|
||||
from unittest import mock
|
||||
|
||||
from bec_lib.messages import DeviceInstructionMessage
|
||||
from bec_server.device_server.tests.utils import DMMock
|
||||
|
||||
from debye_bec.scans import NIDAQContinuousScan
|
||||
|
||||
|
||||
def get_instructions(request, ScanStubStatusMock):
|
||||
request.metadata["RID"] = "my_test_request_id"
|
||||
|
||||
def fake_done():
|
||||
"""
|
||||
Fake done function for ScanStubStatusMock. Upon each call, it returns the next value from the generator.
|
||||
This is used to simulate the completion of the scan.
|
||||
"""
|
||||
yield False
|
||||
yield False
|
||||
yield True
|
||||
|
||||
def fake_complete(*args, **kwargs):
|
||||
yield "fake_complete"
|
||||
return ScanStubStatusMock(done_func=fake_done)
|
||||
|
||||
with (
|
||||
mock.patch.object(request.stubs, "complete", side_effect=fake_complete),
|
||||
mock.patch.object(request.stubs, "_get_result_from_status", return_value=None),
|
||||
):
|
||||
reference_commands = list(request.run())
|
||||
|
||||
for cmd in reference_commands:
|
||||
if not cmd or isinstance(cmd, str):
|
||||
continue
|
||||
if "RID" in cmd.metadata:
|
||||
cmd.metadata["RID"] = "my_test_request_id"
|
||||
if "rpc_id" in cmd.parameter:
|
||||
cmd.parameter["rpc_id"] = "my_test_rpc_id"
|
||||
cmd.metadata.pop("device_instr_id", None)
|
||||
|
||||
return reference_commands
|
||||
|
||||
|
||||
def test_xas_simple_scan(scan_assembler, ScanStubStatusMock):
|
||||
|
||||
request = scan_assembler(NIDAQContinuousScan, scan_duration=10)
|
||||
request.device_manager.add_device("nidaq")
|
||||
reference_commands = get_instructions(request, ScanStubStatusMock)
|
||||
assert reference_commands == [
|
||||
None,
|
||||
None,
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=None,
|
||||
action="scan_report_instruction",
|
||||
parameter={"device_progress": ["nidaq"]},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=None,
|
||||
action="open_scan",
|
||||
parameter={
|
||||
"scan_motors": [],
|
||||
"readout_priority": {
|
||||
"monitored": [],
|
||||
"baseline": [],
|
||||
"on_request": [],
|
||||
"async": ["nidaq"],
|
||||
},
|
||||
"num_points": 0,
|
||||
"positions": [],
|
||||
"scan_name": "nidaq_continuous_scan",
|
||||
"scan_type": "fly",
|
||||
},
|
||||
),
|
||||
DeviceInstructionMessage(metadata={}, device="nidaq", action="stage", parameter={}),
|
||||
DeviceInstructionMessage(
|
||||
metadata={},
|
||||
device=["bpm4i", "eiger", "mo1_bragg", "samx"],
|
||||
action="stage",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "baseline", "RID": "my_test_request_id"},
|
||||
device=["samx"],
|
||||
action="read",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=["bpm4i", "eiger", "mo1_bragg", "nidaq", "samx"],
|
||||
action="pre_scan",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device="nidaq",
|
||||
action="kickoff",
|
||||
parameter={"configure": {}},
|
||||
),
|
||||
"fake_complete",
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id", "point_id": 0},
|
||||
device=["bpm4i", "eiger", "mo1_bragg"],
|
||||
action="read",
|
||||
parameter={"group": "monitored"},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id", "point_id": 1},
|
||||
device=["bpm4i", "eiger", "mo1_bragg"],
|
||||
action="read",
|
||||
parameter={"group": "monitored"},
|
||||
),
|
||||
"fake_complete",
|
||||
DeviceInstructionMessage(
|
||||
metadata={},
|
||||
device=["bpm4i", "eiger", "mo1_bragg", "nidaq", "samx"],
|
||||
action="unstage",
|
||||
parameter={},
|
||||
),
|
||||
DeviceInstructionMessage(
|
||||
metadata={"readout_priority": "monitored", "RID": "my_test_request_id"},
|
||||
device=None,
|
||||
action="close_scan",
|
||||
parameter={},
|
||||
),
|
||||
]
|
||||
31
tests/tests_services/README.md
Normal file
31
tests/tests_services/README.md
Normal file
@@ -0,0 +1,31 @@
|
||||
# Getting Started with Testing using pytest
|
||||
|
||||
BEC is using the [pytest](https://docs.pytest.org/en/8.0.x/) framework.
|
||||
It can be install via
|
||||
``` bash
|
||||
pip install pytest
|
||||
```
|
||||
in your *python environment*.
|
||||
We note that pytest is part of the optional-dependencies `[dev]` of the plugin package.
|
||||
|
||||
## Introduction
|
||||
|
||||
Tests in this package should be stored in the `tests` directory.
|
||||
We suggest to sort tests of different submodules, i.e. `scans` or `devices` in the respective folder structure, and to folow a naming convention of `<test_module_name.py>`.
|
||||
|
||||
To run all tests, navigate to the directory of the plugin from the command line, and run the command
|
||||
|
||||
``` bash
|
||||
pytest -v --random-order ./tests
|
||||
```
|
||||
Note, the python environment needs to be active.
|
||||
The additional arg `-v` allows pytest to run in verbose mode which provides more detailed information about the tests being run.
|
||||
The argument `--random-order` instructs pytest to run the tests in random order, which is the default in the CI pipelines.
|
||||
|
||||
## Test examples
|
||||
|
||||
Writing tests can be quite specific for the given function.
|
||||
We recommend writing tests as isolated as possible, i.e. try to test single functions instead of full classes.
|
||||
A very useful class to enable isolated testing is [MagicMock](https://docs.python.org/3/library/unittest.mock.html).
|
||||
In addition, we also recommend to take a look at the [How-to guides from pytest](https://docs.pytest.org/en/8.0.x/how-to/index.html).
|
||||
|
||||
@@ -2,10 +2,12 @@ from unittest import mock
|
||||
|
||||
import numpy as np
|
||||
import pytest
|
||||
from bec_lib import MessageEndpoints, ServiceConfig, messages
|
||||
from bec_lib import messages
|
||||
from bec_lib.endpoints import MessageEndpoints
|
||||
from bec_lib.redis_connector import MessageObject
|
||||
from bec_lib.service_config import ServiceConfig
|
||||
|
||||
from bec_plugins.services.NIDAQ_writer import NIDAQWriterService
|
||||
from debye_bec.services.NIDAQ_writer import NIDAQWriterService
|
||||
|
||||
|
||||
def test_nidaq_starts_consumers():
|
||||
@@ -32,8 +34,7 @@ class NIWriterMock(NIDAQWriterService):
|
||||
@pytest.fixture(scope="function")
|
||||
def nidaq():
|
||||
service = NIWriterMock(
|
||||
config=ServiceConfig(redis={"host": "test", "port": 6379}),
|
||||
connector_cls=mock.MagicMock(),
|
||||
config=ServiceConfig(redis={"host": "test", "port": 6379}), connector_cls=mock.MagicMock()
|
||||
)
|
||||
yield service
|
||||
|
||||
@@ -46,11 +47,8 @@ def test_nidaq_scan_status_consumer(nidaq):
|
||||
|
||||
|
||||
def test_scan_status_callback(nidaq):
|
||||
scan_status_msg = messages.ScanStatusMessage(scanID="test", status="open", info={})
|
||||
msg_obj = MessageObject(
|
||||
topic="test",
|
||||
value=scan_status_msg.dumps(),
|
||||
)
|
||||
scan_status_msg = messages.ScanStatusMessage(scan_id="test", status="open", info={})
|
||||
msg_obj = MessageObject(topic="test", value=scan_status_msg.dumps())
|
||||
with mock.patch.object(nidaq, "handle_scan_status") as mock_handle:
|
||||
nidaq._scan_status_callback(msg_obj, nidaq)
|
||||
mock_handle.assert_called_once_with(scan_status_msg)
|
||||
@@ -83,10 +81,10 @@ def test_nidaq_reads_data_from_strea(nidaq):
|
||||
mock_handle.assert_called_once()
|
||||
|
||||
|
||||
@pytest.mark.parametrize("scan_status", ["open", "closed", "aborted", "halted", None])
|
||||
@pytest.mark.parametrize("scan_status", ["open", "closed", "aborted", "halted"])
|
||||
def test_nidaq_handle_scan_status(nidaq, scan_status):
|
||||
scan_status_msg = messages.ScanStatusMessage(
|
||||
scanID="test", status=scan_status, info={"scan_number": 5}
|
||||
scan_id="test", status=scan_status, info={"scan_number": 5}
|
||||
)
|
||||
nidaq.handle_scan_status(scan_status_msg)
|
||||
if scan_status == "open":
|
||||
@@ -99,9 +97,14 @@ def test_nidaq_handle_scan_status(nidaq, scan_status):
|
||||
|
||||
def test_nidaq_handle_ni_data(nidaq):
|
||||
data = [
|
||||
messages.DeviceMessage(signals={"signal1": list(range(10)), "signal2": list(range(10))}),
|
||||
messages.DeviceMessage(
|
||||
signals={"signal1": list(range(10, 20)), "signal2": list(range(10, 20))}
|
||||
signals={"signal1": {"value": list(range(10))}, "signal2": {"value": list(range(10))}}
|
||||
),
|
||||
messages.DeviceMessage(
|
||||
signals={
|
||||
"signal1": {"value": list(range(10, 20))},
|
||||
"signal2": {"value": list(range(10, 20))},
|
||||
}
|
||||
),
|
||||
]
|
||||
|
||||
@@ -114,7 +117,7 @@ def test_nidaq_handle_ni_data(nidaq):
|
||||
def test_nidaq_write_data_without_filename(nidaq):
|
||||
signal = {"signal1": np.asarray(range(20)), "signal2": np.asarray(range(20))}
|
||||
|
||||
with mock.patch("bec_plugins.services.NIDAQ_writer.NIDAQ_writer.h5py") as mock_h5py:
|
||||
with mock.patch("debye_bec.services.NIDAQ_writer.NIDAQ_writer.h5py") as mock_h5py:
|
||||
nidaq.write_data(signal)
|
||||
mock_h5py.File.assert_not_called()
|
||||
|
||||
@@ -122,7 +125,7 @@ def test_nidaq_write_data_without_filename(nidaq):
|
||||
def test_nidaq_write_data_with_filename(nidaq):
|
||||
signal = {"signal1": np.asarray(range(20)), "signal2": np.asarray(range(20))}
|
||||
nidaq.filename = "test.h5"
|
||||
with mock.patch("bec_plugins.services.NIDAQ_writer.NIDAQ_writer.h5py") as mock_h5py:
|
||||
with mock.patch("debye_bec.services.NIDAQ_writer.NIDAQ_writer.h5py") as mock_h5py:
|
||||
nidaq.write_data(signal)
|
||||
mock_h5py.File.assert_called_once_with("test.h5", "a")
|
||||
|
||||
@@ -131,7 +134,7 @@ def test_nidaq_write_data_reshape(nidaq):
|
||||
signal = {"signal1": np.asarray(range(20)), "signal2": np.asarray(range(20))}
|
||||
nidaq.filename = "test.h5"
|
||||
nidaq.reshape_dataset = True
|
||||
with mock.patch("bec_plugins.services.NIDAQ_writer.NIDAQ_writer.h5py") as mock_h5py:
|
||||
with mock.patch("debye_bec.services.NIDAQ_writer.NIDAQ_writer.h5py") as mock_h5py:
|
||||
nidaq.write_data(signal)
|
||||
mock_h5py.File.assert_called_once_with("test.h5", "a")
|
||||
|
||||
@@ -140,7 +143,7 @@ def test_nidaq_write_data_without_reshape(nidaq):
|
||||
signal = {"signal1": np.asarray(range(20)), "signal2": np.asarray(range(20))}
|
||||
nidaq.filename = "test.h5"
|
||||
nidaq.reshape_dataset = False
|
||||
with mock.patch("bec_plugins.services.NIDAQ_writer.NIDAQ_writer.h5py") as mock_h5py:
|
||||
with mock.patch("debye_bec.services.NIDAQ_writer.NIDAQ_writer.h5py") as mock_h5py:
|
||||
nidaq.write_data(signal)
|
||||
mock_h5py.File.assert_called_once_with("test.h5", "a")
|
||||
file_handle = mock_h5py.File().__enter__()
|
||||
@@ -161,7 +164,7 @@ def test_nidaq_write_data_reshapes_data(nidaq):
|
||||
signal = {"signal1": np.asarray(range(20)), "signal2": np.asarray(range(20))}
|
||||
nidaq.filename = "test.h5"
|
||||
nidaq.reshape_dataset = True
|
||||
with mock.patch("bec_plugins.services.NIDAQ_writer.NIDAQ_writer.h5py") as mock_h5py:
|
||||
with mock.patch("debye_bec.services.NIDAQ_writer.NIDAQ_writer.h5py") as mock_h5py:
|
||||
file_handle = mock_h5py.File().__enter__()
|
||||
file_handle.__contains__.side_effect = signal.__contains__
|
||||
nidaq.write_data(signal)
|
||||
Reference in New Issue
Block a user