sf-mx/crystfel_tools
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  • b06ce3e117 Delete crystfel_run.sh beale_j 2023-09-19 10:41:31 +02:00
  • 044fda0ca6 Delete crystfel_chunk.py beale_j 2023-09-19 10:41:21 +02:00
  • 68b1c840e7 same as split script but can change crystfel parameters from command line Beale John Henry 2023-09-19 10:40:17 +02:00
  • fa3864e2f8 python script to split crystfel runs on cluster Beale John Henry 2023-09-19 10:39:32 +02:00
  • f2d72dc860 moved to new folder Beale John Henry 2023-09-19 10:39:01 +02:00
  • 7365885f9b thaumatin cell Beale John Henry 2023-09-19 09:08:18 +02:00
  • d827c781c3 dtpaa.cell from commissioning experiments Beale John Henry 2023-09-19 09:04:04 +02:00
  • 5bcebd25c9 hewl cell in new locationwith other cell files Beale John Henry 2023-09-19 09:02:02 +02:00
  • 77f2560aa5 updated check job status Beale John Henry 2023-09-08 12:01:15 +02:00
  • 7fa3bd4aa9 Merge branch 'master' of https://gitlab.psi.ch/beale_j/crmx-tools Beale John Henry 2023-07-19 14:58:16 +02:00
  • ee0178864e change output file locations Beale John Henry 2023-07-19 14:57:31 +02:00
  • fad0f3b518 a python script to split the processing of large run files Beale John Henry 2023-07-19 13:58:43 +02:00
  • 7c63b6f0e2 Update README.md beale_j 2023-07-13 13:07:03 +00:00
  • 3cfe47e761 updated to python3 and included now an arg.parse Beale John Henry 2023-07-12 16:10:36 +02:00
  • 0f2e8e700e raw code from Thomas Barends for visulaising preferential orientations from CrystFEL .stream files Beale John Henry 2023-07-12 15:56:12 +02:00
  • c15f3a0b82 Merge branch 'master' of https://gitlab.psi.ch/beale_j/crmx-tools Beale John Henry 2023-07-12 09:41:51 +02:00
  • d58f148e3c updated so fine scan takes input of coarse scan and you don't need to close the eog window in the middle of the run Beale John Henry 2023-07-11 16:40:26 +02:00
  • ab4bd7991b Delete distance-refinement.py beale_j 2023-06-25 21:29:25 +00:00
  • 03e9e0e462 latest geom file from 230604 p21198 Beale John Henry 2023-06-25 23:28:24 +02:00
  • 625ae53cd5 now uses argparse and some bug fixes Beale John Henry 2023-06-25 23:23:41 +02:00
  • f4907ad02b updated to include argparse and figs in a fucntion Beale John Henry 2023-06-25 23:06:02 +02:00
  • 882a4ebd29 corrected clen and position bugs Beale John Henry 2023-06-25 21:52:03 +02:00
  • 03d126aece cleaned some comments Beale John Henry 2023-04-26 15:02:18 +02:00
  • 7ea6c3c302 complete detector refinement script by Tom Beale John Henry 2023-04-26 14:54:14 +02:00
  • 026180113d CrystFEL .cell for hewl crystals Beale John Henry 2023-04-21 12:16:09 +02:00
  • a85cea492f python script to take sample from SwissFEL lst output Beale John Henry 2023-04-21 12:14:03 +02:00
  • 37116258e1 script for CrystFEL to apply detector x/y shift to a .geom file Beale John Henry 2023-04-21 12:13:27 +02:00
  • 6cd4cdf9fb updated mask path Beale John Henry 2023-04-18 14:39:25 +02:00
  • 1f1d5d3f04 addition of pixel mask Beale John Henry 2023-04-18 14:38:58 +02:00
  • 35243d27db updated user instructions at the beginning of the script Beale John Henry 2023-03-23 12:21:49 +01:00
  • a34f0f3738 changed protocol Beale John Henry 2023-03-23 12:11:39 +01:00
  • 0136f6ecc5 changed authors Beale John Henry 2023-03-23 12:09:05 +01:00
  • 0fcd91ad08 added -j arg. so that the specific jungfrau can be passed from jungfrau utils - script should now also work for Alvra Beale John Henry 2023-03-23 12:07:33 +01:00
  • 558d610cf3 add p-group to output geom name, now uses default geom file from crmx-tools Beale John Henry 2023-03-22 14:26:41 +01:00
  • aceed99f22 Merge branch 'master' of https://gitlab.psi.ch/beale_j/crmx-tools Beale John Henry 2023-03-22 14:15:29 +01:00
  • 801e975587 rectifying conflict Beale John Henry 2023-03-22 14:14:47 +01:00
  • 786be32493 Delete convert-scan-for-pyfai-16M.py beale_j 2023-03-22 13:13:55 +00:00
  • fc1cc47b88 Update convert-scan-for-pyfai.py beale_j 2023-03-22 13:13:29 +00:00
  • 492879592c rm 16M as now works for Cristallina and Alvra Beale John Henry 2023-03-22 14:10:38 +01:00
  • 7a7e565197 Delete update-geom-from-lab6.py beale_j 2023-03-22 13:04:37 +00:00
  • 76441e7401 Delete distance-scan-analysis.py beale_j 2023-03-22 13:04:33 +00:00
  • 8acdebf928 Delete distance-refinement.py beale_j 2023-03-22 13:04:29 +00:00
  • f5da203747 Delete convert-scan-for-pyfai.py beale_j 2023-03-22 13:04:25 +00:00
  • a46b44f6d4 Delete convert-scan-for-pyfai-16M.py beale_j 2023-03-22 13:04:21 +00:00
  • b1ce7a2215 organised tools into directories - made 16M pyfai script work Beale John Henry 2023-03-22 14:03:00 +01:00
  • cfcc9b5941 updated to take inputs from poni file Beale John Henry 2023-03-21 15:52:51 +01:00
  • a9e3e74ffc new version of convert-scan-for-pyfai for 16M detector - added in_batch line to help with the opening of images Beale John Henry 2023-03-21 12:19:45 +01:00
  • fb2f0af11a addition of script to update geom from pyFAI poni results Beale John Henry 2023-03-16 17:06:22 +01:00
  • 1f24af6cea initial scripts to analyse the detector distance Beale John Henry 2023-03-16 16:27:40 +01:00
  • 5cb374c4a5 updates to the script instructions Beale John Henry 2023-03-15 14:51:37 +01:00
  • 9fb67f4302 first scripts Beale John Henry 2023-03-09 15:00:55 +01:00
  • 8d4555e6e9 Initial commit beale_j 2023-03-09 13:56:33 +00:00