Delete crystfel_run.sh

This commit is contained in:
2023-09-19 10:41:31 +02:00
parent 044fda0ca6
commit b06ce3e117

View File

@@ -1,25 +0,0 @@
/#!/bin/bash
module purge
module load crystfel/0.10.2
indexamajig -i <path-to-images> \
-o <output.steam> \
--geometry=<path-to-geom> \
--pdb=<path-to-cell> \
--indexing=xgandalf-latt-cell \
--peaks=peakfinder8 \
--integration=rings-grad \
--tolerance=10.0,10.0,10.0,2,3,2 \
--threshold=10 \
--min-snr=5 \
--int-radius=3,5,1 \
-j 36 \
--no-multi \
--no-retry \
--check-peaks \
--max-res=3000 \
--min-pix-count=1 \
--local-bg-radius=4 \
--min-res=85