Commit Graph

79 Commits

Author SHA1 Message Date
Beale John Henry
8b032c6921 fixed unit cell bug 2023-12-10 13:06:04 +01:00
Beale John Henry
06dcf5b2d0 Rsplit bu fix 2023-11-06 09:24:58 +01:00
Beale John Henry
20517a6924 script to selectively remove unwanted crystals from a stream file based on their unit cell lengths and angles 2023-11-03 10:29:00 +01:00
Beale John Henry
c1b8d83e46 removed mtz make function 2023-11-03 10:18:59 +01:00
Beale John Henry
e37f082597 script to make mtz files from .hkl outputs 2023-11-03 10:14:31 +01:00
Beale John Henry
cc873061ba small bug fix to plot output 2023-11-03 09:54:18 +01:00
Beale John Henry
d43dce83ce some bug fixes and updated functionality, imporved plots, now also rsplit and mutl 2023-11-03 09:52:13 +01:00
Beale John Henry
5a2840ee3b fixed bug in scrub cells and updated crystfel default parameters 2023-11-03 08:56:57 +01:00
Beale John Henry
015a8817db added nograd and changed int-radius 2023-11-03 08:46:42 +01:00
Beale John Henry
d5368b1004 script for concatenating list files together 2023-10-10 09:36:56 +02:00
Beale John Henry
82e17f4bcc cleaned 2023-10-10 09:27:51 +02:00
Beale John Henry
9a71a59e99 some updates 2023-10-10 09:25:55 +02:00
Beale John Henry
ae019084f2 changes to argparese for endstation and use mosflm for indexing 2023-10-10 09:14:30 +02:00
Beale John Henry
5e6b5160f1 bug fix, clen substitution did not take into account the beam energy might be a float. Now, the possibility is taken into account 2023-10-05 09:48:39 +02:00
Beale John Henry
4c264a401f Merge branch 'master' of https://gitlab.psi.ch/beale_j/crmx-tools
Including change made by beale_e to, i think, the pyfai code?
2023-10-05 09:43:53 +02:00
Beale John Henry
e81a9960a0 bug fix, input change on resolution type from int to float 2023-10-05 09:43:06 +02:00
650175215c Merge branch 'beale_e-master-patch-63359' into 'master'
Adding panels instead of '16'

See merge request beale_j/crmx-tools!1
2023-09-28 21:24:07 +02:00
Beale John Henry
ce1e46611d bug fix - wrong CC plot file name 2023-09-28 12:52:11 +02:00
Beale John Henry
632e98b6d2 script to scan push-res values in partialator 2023-09-28 12:37:45 +02:00
065ead4884 Adding panels instead of '16' 2023-09-28 11:49:09 +02:00
Beale John Henry
ee52220e85 updated loguru 2023-09-27 15:42:54 +02:00
Beale John Henry
c8918fab75 partialator script with analysis functions 2023-09-27 11:21:46 +02:00
Beale John Henry
4b33332bf9 now has stream_stats output and log file - loguru still needs work 2023-09-27 06:48:54 +02:00
Beale John Henry
7eede81cec cheeky script that spits out a bunch of info about a stream file 2023-09-26 21:35:40 +02:00
Beale John Henry
399b5ad03d additions and bug fixes in script 2023-09-26 17:06:30 +02:00
Beale John Henry
70f855bd20 gui to create correctly formated .cell files 2023-09-19 11:38:12 +02:00
80884c5b1f Delete hewl.cell 2023-09-19 10:41:40 +02:00
b06ce3e117 Delete crystfel_run.sh 2023-09-19 10:41:31 +02:00
044fda0ca6 Delete crystfel_chunk.py 2023-09-19 10:41:21 +02:00
Beale John Henry
68b1c840e7 same as split script but can change crystfel parameters from command line 2023-09-19 10:40:17 +02:00
Beale John Henry
fa3864e2f8 python script to split crystfel runs on cluster 2023-09-19 10:39:32 +02:00
Beale John Henry
f2d72dc860 moved to new folder 2023-09-19 10:39:01 +02:00
Beale John Henry
7365885f9b thaumatin cell 2023-09-19 09:08:18 +02:00
Beale John Henry
d827c781c3 dtpaa.cell from commissioning experiments 2023-09-19 09:04:04 +02:00
Beale John Henry
5bcebd25c9 hewl cell in new locationwith other cell files 2023-09-19 09:02:02 +02:00
Beale John Henry
77f2560aa5 updated check job status 2023-09-08 12:01:15 +02:00
Beale John Henry
7fa3bd4aa9 Merge branch 'master' of https://gitlab.psi.ch/beale_j/crmx-tools
some differences between repo and master?
2023-07-19 14:58:16 +02:00
Beale John Henry
ee0178864e change output file locations 2023-07-19 14:57:31 +02:00
Beale John Henry
fad0f3b518 a python script to split the processing of large run files 2023-07-19 13:58:43 +02:00
7c63b6f0e2 Update README.md 2023-07-13 13:07:03 +00:00
Beale John Henry
3cfe47e761 updated to python3 and included now an arg.parse 2023-07-12 16:10:36 +02:00
Beale John Henry
0f2e8e700e raw code from Thomas Barends for visulaising preferential orientations from CrystFEL .stream files 2023-07-12 15:56:12 +02:00
Beale John Henry
c15f3a0b82 Merge branch 'master' of https://gitlab.psi.ch/beale_j/crmx-tools
There appeared to be an issue between the repo and branch. Not sure what.
2023-07-12 09:41:51 +02:00
Beale John Henry
d58f148e3c updated so fine scan takes input of coarse scan and you don't need to close the eog window in the middle of the run 2023-07-11 16:40:26 +02:00
ab4bd7991b Delete distance-refinement.py 2023-06-25 21:29:25 +00:00
Beale John Henry
03e9e0e462 latest geom file from 230604 p21198 2023-06-25 23:28:24 +02:00
Beale John Henry
625ae53cd5 now uses argparse and some bug fixes 2023-06-25 23:23:41 +02:00
Beale John Henry
f4907ad02b updated to include argparse and figs in a fucntion 2023-06-25 23:06:02 +02:00
Beale John Henry
882a4ebd29 corrected clen and position bugs 2023-06-25 21:52:03 +02:00
Beale John Henry
03d126aece cleaned some comments 2023-04-26 15:02:18 +02:00