added nograd and changed int-radius

This commit is contained in:
Beale John Henry
2023-11-03 08:46:42 +01:00
parent d5368b1004
commit 015a8817db

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@@ -3,17 +3,17 @@
module purge
module load crystfel/0.10.2
indexamajig -i <path-to-images> \ # change this
-o <output.steam> \ # change this
--geometry=<path-to-geom> \ # change this
--pdb=<path-to-cell> \ # change this
indexamajig -i <path-to-images> \
-o <output.steam> \
--geometry=<path-to-geom> \
--pdb=<path-to-cell> \
--indexing=xgandalf-latt-cell \
--peaks=peakfinder8 \
--integration=rings-grad \
--integration=rings-nograd \
--tolerance=10.0,10.0,10.0,2,3,2 \
--threshold=10 \
--min-snr=5 \
--int-radius=3,5,9 \
--int-radius=5,5,9 \
-j 32 \
--no-multi \
--no-retry \