Commit Graph

54 Commits

Author SHA1 Message Date
Beale John Henry
70f855bd20 gui to create correctly formated .cell files 2023-09-19 11:38:12 +02:00
80884c5b1f Delete hewl.cell 2023-09-19 10:41:40 +02:00
b06ce3e117 Delete crystfel_run.sh 2023-09-19 10:41:31 +02:00
044fda0ca6 Delete crystfel_chunk.py 2023-09-19 10:41:21 +02:00
Beale John Henry
68b1c840e7 same as split script but can change crystfel parameters from command line 2023-09-19 10:40:17 +02:00
Beale John Henry
fa3864e2f8 python script to split crystfel runs on cluster 2023-09-19 10:39:32 +02:00
Beale John Henry
f2d72dc860 moved to new folder 2023-09-19 10:39:01 +02:00
Beale John Henry
7365885f9b thaumatin cell 2023-09-19 09:08:18 +02:00
Beale John Henry
d827c781c3 dtpaa.cell from commissioning experiments 2023-09-19 09:04:04 +02:00
Beale John Henry
5bcebd25c9 hewl cell in new locationwith other cell files 2023-09-19 09:02:02 +02:00
Beale John Henry
77f2560aa5 updated check job status 2023-09-08 12:01:15 +02:00
Beale John Henry
7fa3bd4aa9 Merge branch 'master' of https://gitlab.psi.ch/beale_j/crmx-tools
some differences between repo and master?
2023-07-19 14:58:16 +02:00
Beale John Henry
ee0178864e change output file locations 2023-07-19 14:57:31 +02:00
Beale John Henry
fad0f3b518 a python script to split the processing of large run files 2023-07-19 13:58:43 +02:00
7c63b6f0e2 Update README.md 2023-07-13 13:07:03 +00:00
Beale John Henry
3cfe47e761 updated to python3 and included now an arg.parse 2023-07-12 16:10:36 +02:00
Beale John Henry
0f2e8e700e raw code from Thomas Barends for visulaising preferential orientations from CrystFEL .stream files 2023-07-12 15:56:12 +02:00
Beale John Henry
c15f3a0b82 Merge branch 'master' of https://gitlab.psi.ch/beale_j/crmx-tools
There appeared to be an issue between the repo and branch. Not sure what.
2023-07-12 09:41:51 +02:00
Beale John Henry
d58f148e3c updated so fine scan takes input of coarse scan and you don't need to close the eog window in the middle of the run 2023-07-11 16:40:26 +02:00
ab4bd7991b Delete distance-refinement.py 2023-06-25 21:29:25 +00:00
Beale John Henry
03e9e0e462 latest geom file from 230604 p21198 2023-06-25 23:28:24 +02:00
Beale John Henry
625ae53cd5 now uses argparse and some bug fixes 2023-06-25 23:23:41 +02:00
Beale John Henry
f4907ad02b updated to include argparse and figs in a fucntion 2023-06-25 23:06:02 +02:00
Beale John Henry
882a4ebd29 corrected clen and position bugs 2023-06-25 21:52:03 +02:00
Beale John Henry
03d126aece cleaned some comments 2023-04-26 15:02:18 +02:00
Beale John Henry
7ea6c3c302 complete detector refinement script by Tom 2023-04-26 14:54:14 +02:00
Beale John Henry
026180113d CrystFEL .cell for hewl crystals 2023-04-21 12:16:09 +02:00
Beale John Henry
a85cea492f python script to take sample from SwissFEL lst output 2023-04-21 12:14:03 +02:00
Beale John Henry
37116258e1 script for CrystFEL to apply detector x/y shift to a .geom file 2023-04-21 12:13:27 +02:00
Beale John Henry
6cd4cdf9fb updated mask path 2023-04-18 14:39:25 +02:00
Beale John Henry
1f1d5d3f04 addition of pixel mask 2023-04-18 14:38:58 +02:00
Beale John Henry
35243d27db updated user instructions at the beginning of the script 2023-03-23 12:21:49 +01:00
Beale John Henry
a34f0f3738 changed protocol 2023-03-23 12:11:39 +01:00
Beale John Henry
0136f6ecc5 changed authors 2023-03-23 12:09:05 +01:00
Beale John Henry
0fcd91ad08 added -j arg. so that the specific jungfrau can be passed from jungfrau utils - script should now also work for Alvra 2023-03-23 12:07:33 +01:00
Beale John Henry
558d610cf3 add p-group to output geom name, now uses default geom file from crmx-tools 2023-03-22 14:26:41 +01:00
Beale John Henry
aceed99f22 Merge branch 'master' of https://gitlab.psi.ch/beale_j/crmx-tools
convert scan 16 M version was deleted as now the code works for both Alvra and Cristallina detectors
2023-03-22 14:15:29 +01:00
Beale John Henry
801e975587 rectifying conflict 2023-03-22 14:14:47 +01:00
786be32493 Delete convert-scan-for-pyfai-16M.py 2023-03-22 13:13:55 +00:00
fc1cc47b88 Update convert-scan-for-pyfai.py 2023-03-22 13:13:29 +00:00
Beale John Henry
492879592c rm 16M as now works for Cristallina and Alvra 2023-03-22 14:10:38 +01:00
7a7e565197 Delete update-geom-from-lab6.py 2023-03-22 13:04:37 +00:00
76441e7401 Delete distance-scan-analysis.py 2023-03-22 13:04:33 +00:00
8acdebf928 Delete distance-refinement.py 2023-03-22 13:04:29 +00:00
f5da203747 Delete convert-scan-for-pyfai.py 2023-03-22 13:04:25 +00:00
a46b44f6d4 Delete convert-scan-for-pyfai-16M.py 2023-03-22 13:04:21 +00:00
Beale John Henry
b1ce7a2215 organised tools into directories - made 16M pyfai script work 2023-03-22 14:03:00 +01:00
Beale John Henry
cfcc9b5941 updated to take inputs from poni file 2023-03-21 15:52:51 +01:00
Beale John Henry
a9e3e74ffc new version of convert-scan-for-pyfai for 16M detector - added in_batch line to help with the opening of images 2023-03-21 12:19:45 +01:00
Beale John Henry
fb2f0af11a addition of script to update geom from pyFAI poni results 2023-03-16 17:06:22 +01:00