162 Commits

Author	SHA1	Message	Date
leonarski_f	a34a033c99	frontend: auto-fill the missing phi bound for a sector ... When only one azimuthal phi bound is entered, fill the other so the sector is well-defined and the server accepts it: a missing phi_min becomes 0 and a missing phi_max becomes 360. Leaving both empty still means a full ring. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>	2026-06-19 16:05:15 +02:00
leonarski_f	e9e5ec79cd	frontend: phi_min/phi_max columns in the azimuthal ROI table ... Surface the optional azimuthal phi-sector bounds (phi_min_deg/phi_max_deg) as editable columns, so a sector can be set from the web UI, not only the viewer. Also fix the Q_max row's d header, which read d_max but is d_min. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>	2026-06-19 16:01:13 +02:00
leonarski_f	332fd32224	frontend: link PSI in footer, add Source code and License to References ... - Footer "Paul Scherrer Institute" now links to https://www.psi.ch - Reference drawer gains a "Source code" entry linking out to the Gitea repository (new nav-item href that opens in a new tab) - Reference drawer gains a "License" entry rendering the nicely formatted docs/LICENSE.md inline (generalises the changelog renderer into MarkdownDoc) Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>	2026-06-19 13:23:51 +02:00
leonarski_f	6962a61489	frontend: render Changelog inline instead of in a Sphinx iframe ... The framed Sphinx changelog reused MUI with the same colours, so it read as a picture-in-picture. Bundle docs/CHANGELOG.md at build time (?raw) and render it with react-markdown, themed to match the app, for a quick frame-less view. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>	2026-06-19 13:21:19 +02:00
leonarski_f	cee4739221	frontend: bundle Sphinx docs locally instead of linking readthedocs ... The Documentation tab pointed at jungfraujoch.readthedocs.io, which lags behind the installed version. Build the Sphinx docs into frontend/dist/docs and serve them at /frontend/docs so they always match the package. - make_doc.sh: accept an output dir (default public), absolutize it, run from the script dir, and allow $PYTHON override - package.json: add "docs" script building into dist/docs - CMakeLists: run "npm run docs" in the frontend target so CPack packs the docs via the existing dist/ install - App.tsx: point the Documentation DocFrame at /frontend/docs/index.html Also clean up the Sphinx build (911 -> 0 warnings): - fix typo myst_heading_anchor -> myst_heading_anchors so cross-doc #anchor links actually resolve - suppress myst.header/myst.xref_missing (auto-generated OpenAPI client docs only) and the harmless sphinx_material config.cache note - drop a dangling "---" transition at the end of CPU_DATA_ANALYSIS.md - add REPOSITORIES and the generated python_client model pages to toctrees Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>	2026-06-19 12:44:00 +02:00
leonarski_f	1d04656dc8	api: serialize azimuthal ROI phi sector over OpenAPI and CBOR ... Expose the optional phi_min_deg / phi_max_deg azimuthal-sector bounds added to ROIAzimuthal through the wire formats. Both are optional, so older clients and streams (Q-only ROIs) remain valid. - jfjoch_api.yaml: optional phi_min_deg / phi_max_deg on roi_azimuthal; regenerated the cpp-pistache server model and the TS frontend client. - OpenAPIConvert: map phi both directions (set only when present). - CBOR start message: emit phi_min/phi_max only for a sector; on decode, absent phi means a full ring. - Documented the new optional CBOR fields; extended the CBOR round-trip test with a sector and a full-ring azimuthal ROI. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>	2026-06-19 09:28:25 +02:00
leonarski_f	a76aac65b7	frontend: add missing React keys in DetectorSelection and ROI ... DetectorSelection rendered the info-table rows and the detector-select menu items without keys; ROI's grid action cells likewise. Add stable keys to silence the warnings. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>	2026-06-19 08:01:03 +02:00
leonarski_f	4f9452736a	frontend: drawer-based navigation shell ... Replace the stack of toggle-revealed sections with a left navigation drawer (collapsible, expanded by default) clipped under a persistent status bar. Dashboard (plots + measurement statistics + spot-finding) is the default view; every other panel is its own drawer entry, so one thing shows at a time. - Group entries under Acquisition / Expert / Reference subheaders; ROI folded into On-the-fly processing. - Pale-indigo drawer with a lime accent on the selected entry. - Gray out JUNGFRAU calibration / FPGA status when their data is empty. - API reference and documentation open in-app via iframe. - Fixed footer pinned to the page bottom. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>	2026-06-19 07:57:57 +02:00
leonarski_f	9fc971c1d2	frontend: add zod plugin to hey-api openapi-ts ... Generate Zod schemas alongside the typed client (src/client/zod.gen.ts), picking up the OpenAPI field defaults. Enables runtime validation and default-filling for form payloads. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>	2026-06-19 07:24:52 +02:00
leonarski_f	5d8e33d52c	frontend: orange Upload button when panel is dirty ... Match the unsaved-changes dot: the Upload button uses the warning color while the panel has unedited changes, primary otherwise. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>	2026-06-18 22:14:10 +02:00
leonarski_f	59da040e30	frontend: shared SettingsPanel + typed upload with error display ... Generalize the expert-panel boilerplate (container + title + widgets + upload button) and surface real upload errors via hey-api. - SettingsPanel: consistent padded Paper + Typography title (one place to size it) + optional Upload button + result snackbar; PanelTitle and UploadSnackbarView exported for panels with bespoke layouts (DetectorSettings grid, ROI) - useUpload(mutation): wraps a generated hey-api mutation, shows the server's error message on failure (errorMessage handles 400 string / 500 error_message) - "unsaved changes" dot on panel titles, derived from the existing last-downloaded snapshot (dirty = !isEqual(value, lastDownloaded)) - fix PixelMask: TIFF upload was swallowing errors; now shows them - config panels (FileWriter, ImageFormat, Detector, AzInt, DarkMask, Indexing, Instrument, ZeroMQ, ROI, DetectorSelection) upload through the typed SDK instead of ButtonWithSnackbar's raw fetch; status/display panels share the same shell for consistent spacing - ButtonWithSnackbar now only powers bodyless action buttons (pedestal/cancel/ initialize, start/trigger, deactivate) Build (tsc + vite) passes; dev server transforms all modules. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>	2026-06-18 22:04:55 +02:00
leonarski_f	237de5a0fc	frontend: convert to function components + TanStack Query ... Replace all class components with function components and move server-state polling to @tanstack/react-query. - add @tanstack/react-query; generate query helpers via the hey-api @tanstack/react-query plugin (src/client/@tanstack) - QueryClientProvider + one-time client.setConfig({ baseUrl: '' }) in index.tsx - App polls statistics with useQuery(getStatisticsOptions, refetchInterval), DataProcessingPlot uses getPreviewPlotOptions; manual setInterval polling gone - memo() on presentational children; with TanStack structural sharing this re-renders a child only when its own statistics slice changes - PreviewImage stays imperative (binary JPEG -> object URL) using useEffect + a ref for the object-URL lifecycle - fix AzIntSettings correction checkboxes that mutated state in place (relied on the poll re-render); they now use setState - drop dead code uncovered during the port (unused upload/deactivate handlers and imports in ImageFormatSettings, DetectorSettings, ROI) Build (tsc + vite) passes; dev server transforms all entry modules. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>	2026-06-18 21:32:36 +02:00
leonarski_f	ceb7d31eac	frontend: generate OpenAPI client with @hey-api/openapi-ts ... Replace the unmaintained openapi-typescript-codegen generator with @hey-api/openapi-ts. - openapi-ts.config.ts generates src/client from ../broker/jfjoch_api.yaml (client-fetch + typescript + sdk plugins; enums as const objects via mode: 'javascript', type names preserved) - npm "openapi" script now runs openapi-ts; drop openapi-typescript-codegen - migrate all imports from src/openapi to src/client - DefaultService.foo() -> standalone foo({ body|query, throwOnError }) - OpenAPI.BASE='' -> client.setConfig({ baseUrl: '' }); ButtonWithSnackbar uses the relative path directly - adapt hey-api's inlined enums: broker_status.state/message_severity and bit_depth_image/eiger_bit_depth become string/number literal unions; file_writer_format NXMX_* -> N_XMX_* - remove generated src/openapi Build (tsc + vite) passes. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>	2026-06-18 20:30:15 +02:00
leonarski_f	eb9b463263	VERSION: 1.0.0-rc.153	2026-06-18 19:26:15 +02:00
leonarski_f	d14b8e9e18	Merge upstream	2026-06-18 18:52:22 +02:00
leonarski_f	d0a1175c65	Clean-up of OpenAPI code	2026-06-18 14:29:53 +02:00
leonarski_f	e1622c3750	plots: expose compression_ratio over the REST/UI plot path ... The receiver already computes and stores the compression ratio per image (JFJochReceiverPlots Add/GetPlots/GetPlotRaw all handle PlotType::CompressionRatio), but the type was unreachable from the API: it was missing from ConvertPlotType, the OpenAPI plot_type enum, and the TS client, so requesting it returned 500 and no UI menu entry existed. Wire it through all layers: - broker: add the compression_ratio -> PlotType::CompressionRatio case in ConvertPlotType. - spec: add compression_ratio to the plot_type parameter enum. - frontend: add COMPRESSION_RATIO to the generated plot_type enum (matches what regeneration would produce), a "Compression ratio" menu entry, and a Y-axis label. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>	2026-06-18 13:52:41 +02:00
leonarski_f	c49bd2ac3b	v1.0.0-rc.152 (#62) ... * jfjoch_broker: Fix bounds for azimuthal integration for Q spacing (allow Q of 1e-5) * jfjoch_viewer: Adjust Q bounds for azimuthal integration * jfjoch_azint: Add tool to do quick azimuthal integration Reviewed-on: #62	2026-06-17 20:36:24 +02:00
leonarski_f	3334e88d3e	frontend: fix state bugs, slim Plotly bundle, drop CRA leftovers ... - App: make getValues an arrow field so its `this` survives being passed as the `update` prop (the post-edit statistics refresh was broken). - DataProcessingSettings: guard prop sync with last_downloaded_s + _.isEqual so the 1 s statistics poll no longer overwrites a slider mid-edit (reference `!=` on a freshly-parsed object was always true → snap-back). - DataCollection: collapse nested setState in grid-scan callbacks. - PreviewImage: build an immutable settings copy instead of mutating state in place; fix stale comment. - MultiLinePlotWrapper: drop per-render console.log; render via a custom Plot built on plotly.js-cartesian-dist-min (scatter+heatmap only), cutting the main bundle 6.0->2.6 MB (1.8->0.8 MB gzip). - package.json: remove dead react-scripts test/eject scripts and CRA eslintConfig, move @redocly/cli to devDependencies. - Delete unused CRA scaffolding (serviceWorker.js, react-app-env.d.ts, setupTests.js). Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>	2026-06-16 20:51:45 +02:00
leonarski_f	ef52dac2ee	v1.0.0-rc.151 (#61) ... * jfjoch_broker: For PSI EIGER detector allow to disable individual half-modules by putting empty hostname Reviewed-on: #61 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>	2026-06-16 14:13:29 +02:00
leonarski_f	90e804acd7	v1.0.0-rc.150 (#60) ... * jfjoch_broker: When in FPGA workflow (with PSI detectors) azimuthal integration might be forced to CPU - this will require more computational power, but it enables more integration bins and reports standard deviation of each bin. * jfjoch_broker: Raise error if one is in FPGA flow and there are too many azimuthal integration bins. Reviewed-on: #60	2026-06-15 20:24:15 +02:00
leonarski_f	ea575f790a	v1.0.0-rc.149 (#59) ... * XDS plugin: Fix HDF5 mutex to run on multiple processors Reviewed-on: #59	2026-06-13 21:27:41 +02:00
leonarski_f	cc3eb8352c	v1.0.0-rc.148 (#58) ... This is an UNSTABLE release. The release has significant modifications for data processing - in case of troubles go back to 1.0.0-rc.144. * jfjoch_broker: Improve azimuthal integration (add <I^2> calculation) * jfjoch_broker: Fixes around indexing, aiming to handle multi-lattice crystals (work in progress, it is not fully integrated) * jfjoch_writer: Save mean(I), stddev(I), and count(I) for each azimuthal bin Reviewed-on: #58	2026-06-08 08:30:35 +02:00
leonarski_f	75de40f52b	v1.0.0-rc.147 (#57) ... This is an UNSTABLE release. The release has significant modifications for data processing - in case of troubles go back to 1.0.0-rc.144. * jfjoch_viewer: Add reciprocal space viewer * jfjoch_process: Two pass algorithm that does spot finding/indexing + integration of full dataset * jfjoch_process: Improve logic for rotation indexer, to make execution more deterministic (still work in progress) Reviewed-on: #57 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>	2026-06-02 11:49:24 +02:00
leonarski_f	fc68a9baed	v1.0.0-rc.146 (#56) ... This is an UNSTABLE release. The release has significant modifications for data processing - in case of troubles go back to 1.0.0-rc.144. jfjoch_process: Generate a dedicated file (_process.h5), which can be used as a replacement for the _master.h5 file for a reanalyzed dataset. jfjoch_process: Improve the performance of scaling and merging, implement on the fly scaling. jfjoch_writer: All final data analysis results are repopulated in the _master.h5 file. jfjoch_scale: Dedicated tool for rescaling/merging existing data. jfjoch_viewer: Fix bugs where pixel labels where displayed on a wrong pixel. WARNING! Scaling and merging are experimental at the moment, and may not provide reasonable results for the time being. Reviewed-on: #56	2026-05-28 18:48:35 +02:00
leonarski_f	caef26873e	v1.0.0-rc.145 (#55) ... This is an UNSTABLE release. The release has significant modifications for HDF5 writing logic - in case of troubles go back to 1.0.0-rc.144. * **Default HDF5 writing mode is with VDS, not soft-links** - this improves DIALS compatibility and makes format more future-proof, NXmx legacy format might be phased-out in the future. * XDS plugin: Improve performance of VDS reading. * jfjoch_writer: Significant improvement on how file systems I/O are handled through a dedicated pass-through VFD. * jfjoch_writer: Clean-up of HDF5 routines to better handle issues. Reviewed-on: #55	2026-05-06 21:50:02 +02:00
leonarski_f	7d34e8a049	v1.0.0-rc.144 (#54) ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132. * jfjoch_broker: Improve performance of preview JPEG image generator at receiver startup (saving about 150 ms on measurement start for 16M) Reviewed-on: #54 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>	2026-05-01 17:06:36 +02:00
leonarski_f	6e0bb971ac	v1.0.0-rc.143 (#53) ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132. jfjoch_broker: Avoid copying gain calibration together with DiffractionExperiment Reviewed-on: #53	2026-04-30 22:16:50 +02:00
leonarski_f	87fde1b32e	v1.0.0-rc.142 (#52) ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132. * Support for newer CUDA architectures (notably Blackwell); minimum CUDA version 12.8 * Minor changes to jfjoch_process, jfjoch_fpga_test and jfjoch_lite_perf_test to make them more consistent Reviewed-on: #52 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>	2026-04-30 16:47:53 +02:00
leonarski_f	d760b12a18	v1.0.0-rc.141 (#51) ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132. * jfjoch_broker: Azimuthal integration mapping is generated with parallel computations, significantly reducing setup times * frontend: Fix selection of FFTW in indexing settings Reviewed-on: #51 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>	2026-04-30 13:04:54 +02:00
leonarski_f	239a441ee6	v1.0.0-rc.140 (#50) ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132. * jfjoch_broker: For DECTRIS detectors, ZeroMQ link is persistent, to save time for establishing new connection * jfjoch_broker: Minor bug fixes for rare conditions Reviewed-on: #50	2026-04-29 21:40:22 +02:00
leonarski_f	4878318c27	v1.0.0-rc.139 (#49) ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132. * jfjoch_broker: Further reduce startup time for DECTRIS detectors by selectively modifying SIMPLON parameters on `/start` * jfjoch_broker: Further reduce startup time for DECTRIS detectors by not setting beam center and detector distance via SIMPLON API on '/start' * jfjoch_broker: Add an extra message to ZeroMQ puller ready to monitor Lite worklow preparation time * jfjoch_broker: Image buffer configuration is postponed for Lite receiver flow till start message is received * jfjoch_broker: Use nanoseconds internally for frame/image/readout time * jfjoch_broker: Extra messages added for receiver operation (to be removed after debugging finished) * jfojch_broker: Improve profiling of different data analysis steps * jfjoch_broker: Record integration reflection count * jfjoch_broker: Fix bug where ZeroMQ preview frequency was confusing time units (micro vs. milliseconds) * jfjoch_broker: Fix bug where '/wait_till_done' got deadlocked * jfjoch_writer: Fix confusion between NaN and zero in floating-point datasets **Breaking changes**: detector definition is now using nanoseconds to define minimum frame time, minimum count time and readout time. Reviewed-on: #49	2026-04-29 09:50:50 +02:00
leonarski_f	230480e390	v1.0.0-rc.138 (#48) ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132. jfjoch_broker: Cleanup DECTRIS start-up code to enable a shorter start time jfjoch_broker: Allow for asynchronous start to allow overlapping detector configuration with other beamline preparations jfjoch_broker: Goniometer axis name is converted to lowercase jfjoch_broker: Fix bug, where wrong HTTP error codes were returned jfjoch_broker: Improve sigma estimation during merging (K. Takaba) --------- Co-authored-by: takaba_k <kiyofumi.takaba@psi.ch> Reviewed-on: #48 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>	2026-04-27 19:56:14 +02:00
leonarski_f	c981e1b91c	v1.0.0-rc.137 (#46) ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132. * jfjoch_broker: Better track time for each operation in the processing stack * jfjoch_broker: Rewrite preprocessing of diffraction images in the non-FPGA workflow to better use GPUs (work in progress) * jfjoch_broker: Remove ROI calculation in the non-FPGA workflow (work in progress) * jfjoch_viewer: Toolbar displays image number starting from 1 (instead of 0) Reviewed-on: #46	2026-04-25 19:59:21 +02:00
leonarski_f	c1c170112c	v1.0.0-rc.136 (#45) ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132. * jfjoch_broker: Improve logic regarding indexing architecture and thread pools (work in progress). Reviewed-on: #45	2026-04-20 11:54:33 +02:00
leonarski_f	bb9f5c715f	v1.0.0-rc.135 (#44) ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132. * Multiple small bug fixes scattered across the whole code base. (detected with GPT-5.4) * jfjoch_viewer: Improve image render performance Reviewed-on: #44 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>	2026-04-16 11:59:59 +02:00
leonarski_f	4a852b4d6b	v1.0.0-rc.134 (#43) ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132. * jfjoch_broker: Add better locking for detector object - should help, when detector initialization takes too long * jfjoch_writer: Enable writing single, integrated HDF5 file with both data and metadata * XDS plugin: Add generation of Jungfraujoch plugin for XDS * CI: Add tests with XDS and DIALS (`xia2.ssx`) Reviewed-on: #43	2026-04-09 13:30:47 +02:00
leonarski_f	6133da1377	v1.0.0-rc.133 ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132. * jfjoch_broker: Use httplib for HTTP server instead of Pistache * jfjoch_broker: Drop OpenSSL support * jfjoch_broker: Base work for multi-lattice support in the future * Update dependencies to more recent versions (spdlog, HDF5, Catch2, httplib) Reviewed-on: #41	2026-03-26 20:50:33 +01:00
leonarski_f	2ab9deb20b	v1.0.0-rc.123 (#40) ... Documentation update Reviewed-on: #40	2026-03-12 12:17:11 +01:00
leonarski_f	166fcdb68f	v1.0.0-rc.131 (#39) ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.124. * jfjoch_broker: Fix bug in saving JUNGFRAU calibration (pedestal/pedestalRMS) * jfjoch_viewer: Fix calibration (pedestal) images being open flipped * jfjoch_process: Add space group detection (EXPERIMENTAL) Reviewed-on: #39	2026-03-07 11:34:04 +01:00
leonarski_f	928789a67c	v1.0.0-rc.130 (#37) ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.124. * jfjoch_broker: Rotation indexer has two retries if failes * jfjoch_broker: Rotation indexer handles small number of rotation images (like test shot) * jfjoch_broker: Integration calculates background mask based on R2 radius * jfjoch_process: HDF5 files are not saved by default Reviewed-on: #37	2026-03-06 14:38:56 +01:00
leonarski_f	64002f1e29	v1.0.0-rc.129 (#36) ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.124. * jfjoch_broker: Significant improvements in TCP image socket, as a viable alternative for ZeroMQ sockets (only a single port on broker side, dynamically change number of writers, acknowledgments for written files) * jfjoch_broker: Delta phi is calculated also for still data in Bragg prediction * jfjoch_broker: Image pusher statistics are accessible via the REST interface * jfjoch_writer: Supports TCP image socket and for these auto-forking option Reviewed-on: #36 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>	2026-03-05 22:13:12 +01:00
leonarski_f	3036b1d37f	v1.0.0-rc.128 (#35) ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.124. * jfjoch_broker: Handle properly reuse of image buffer locations * jfjoch_broker: Fix bug in counting idle slots * jfjoch_broker: Force obtuse angle for monoclinic cells * jfjoch_process: Change scaling refinement tolerance Reviewed-on: #35 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>	2026-03-03 22:24:44 +01:00
leonarski_f	f3e0a15d26	v1.0.0-rc.127 (#34) ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.124. * jfjoch_broker: Default EIGER readout time is 20 microseconds * jfjoch_broker: Multiple improvements regarding performance * jfjoch_broker: Image buffer allows to track frames in preparation and sending * jfjoch_broker: Dedicated thread for ZeroMQ transmission to better utilize the image buffer * jfjoch_broker: Experimental implementation of transmission with raw TCP/IP sockets * jfjoch_writer: Fixes regarding properly closing files in long data collections * jfjoch_process: Scale & merge has been significantly improved, but it is not yet integrated into mainstream code Reviewed-on: #34	2026-03-02 15:57:12 +01:00
leonarski_f	32b681e591	v1.0.0-rc.126 (#33) ... This is an UNSTABLE release. If things go wrong with analysis, it is better to revert to 1.0.0-rc.124. * jfjoch_broker: Fix bug for monoclinic space groups being wrongly refined when beta is much different from 90 deg. Reviewed-on: #33 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>	2026-02-19 07:01:38 +01:00
leonarski_f	1ab257af6c	v1.0.0-rc.125 (#32) ... This is an UNSTABLE release. This version adds scalign and merging. These are experimental at the moment, and should not be used for production analysis. If things go wrong with analysis, it is better to revert to 1.0.0-rc.124. * jfjoch_broker: Improve logic on switching on/off spot finding * jfjoch_broker: Increase maximum spot count for FFBIDX to 65536 * jfjoch_broker: Increase default maximum unit cell for FFT to 500 A (could have performance impact, TBD) * jfjoch_process: Add scalign and merging functionality - program is experimental at the moment and should not be used for production analysis * jfjoch_viewer: Display partiality and reciprocal Lorentz-polarization correction for each reflection * jfjoch_writer: Save more information about each reflection Reviewed-on: #32 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>	2026-02-18 16:17:21 +01:00
leonarski_f	07fe4dd3bb	v1.0.0-rc.124 (#31) ... This is an UNSTABLE release. This version significantly rewrites code to predict reflection position and integrate them, especially in case of rotation crystallography. If things go wrong with analysis, it is better to revert to 1.0.0-rc.123. * jfjoch_broker: Improve refection position prediction and Bragg integration code. * jfjoch_broker: Align with XDS way of calculating Lorentz correction and general notation. * jfjoch_writer: Fix saving mosaicity properly in HDF5 file. * jfjoch_viewer: Introduce high-dynamic range mode for images * jfjoch_viewer: Ctrl+mouse wheel has exponential change in foreground (+/-15%) * jfjoch_viewer: Zoom-in numbers have better readability Reviewed-on: #31 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>	2026-02-01 13:29:33 +01:00
leonarski_f	1c4dfd03e2	v1.0.0-rc.123 (#30) ... This is an UNSTABLE release. * jfjoch_broker: Use newer version of Google Ceres for (potential) CUDA 13 compatibility * jfjoch_broker: Improve performance of generating preview images, especially for large detectors (9M-16M) * jfjoch_viewer: Improve performance of displaying images, especially for large detectors (9M-16M) * jfjoch_viewer: Add more color schemes for better image readability * HDF5: Common mutex for reading and writing HDF5 if both operations were to happen in the same executable * HDF5: suppress warning if path (upstream group) doesn't exists when checking if leaf exists Reviewed-on: #30 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>	2026-01-30 13:43:09 +01:00
leonarski_f	27496b8207	v1.0.0-rc.122 (#29) ... This is an UNSTABLE release. * jfjoch_broker: Add thresholding to prefer shorter vectors after FFT * jfjoch_broker: Add experimental mosaicity estimation for rotation experiments (this is work in progress) * jfjoch_viewer: Display file opening errors * jfjoch_viewer: When loading files over DBus add retry/back-off till the file is available Reviewed-on: #29 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>	2025-12-16 15:27:40 +01:00
leonarski_f	e2b240356c	v1.0.0-rc.121 (#28) ... This is an UNSTABLE release. * jfjoch_broker: Report changes in the image buffer, so viewer doesn't reload constantly * jfjoch_viewer: Improve performance of loading images * jfjoch_viewer: Auto-throttle image loading in HTTP-sync / movie modes * jfjoch_viewer: Auto-foreground calculated with histogram * jfjoch_viewer: Fix rare segmentation fault Reviewed-on: #28 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>	2025-12-12 21:24:20 +01:00