v1.0.0-rc.147 #57

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leonarski_f merged 27 commits from 2506-rot-all into main 2026-06-02 11:49:25 +02:00

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leonarski_f commented 2026-06-02 11:49:14 +02:00

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This is an UNSTABLE release. The release has significant modifications for data processing - in case of troubles go back to 1.0.0-rc.144.

• jfjoch_viewer: Add reciprocal space viewer
• jfjoch_process: Two pass algorithm that does spot finding/indexing + integration of full dataset
• jfjoch_process: Improve logic for rotation indexer, to make execution more deterministic (still work in progress)

This is an UNSTABLE release. The release has significant modifications for data processing - in case of troubles go back to 1.0.0-rc.144. * jfjoch_viewer: Add reciprocal space viewer * jfjoch_process: Two pass algorithm that does spot finding/indexing + integration of full dataset * jfjoch_process: Improve logic for rotation indexer, to make execution more deterministic (still work in progress)

leonarski_f added 27 commits 2026-06-02 11:49:14 +02:00

JFJochHDF5Reader: Read spots for one image 56764a948b

RotationIndexer: For fixed space group, set explicitly lattice type and centering for refinement b44b0a56fb

JFJochHDF5Reader: Use lattice, and not Niggli class, to decode symmetry (if symmetry is imposed, then lattice search returns niggli class 0 8660558341

XtalOptimizer: Accept std::vector<std::vector<SpotToSave>> for spots input, to distinguish spots between different images 07d7174eff

CMake: In debug mode JFJochVersion needs to be explicitly PIC to link with the plugin a6f61b0d8a

RotationIndexer: Separate ProcessImage and GetLattice 4b609a6e06

jfjoch_test: Fix JFJochReader_NiggliClass_VDS 4674aff202

RotationIndexer: Add limit on spot count per image (not global), to enable fair-share of images + limit maximum number of images (there is no real benefit of going above 100 images in this model) 0e4d80acd6

RotationIndexer: Add GetAccumulatedImages() - though not sure if really useful e3924a08dd

RotationIndexer: Remove logic controlling image accumulation 7b20eedcbd

RotationIndexerCounter: Implement rotation indexing counting logic caa38a9732

IndexAndRefine: Dedicated function to add image to rotation indexer 40ae325995

jfjoch_process: Enable two-pass algorithm 6c8b2d4ddd

jfjoch_tests: Fix lattice test with VDS HDF5 33e9a368f6

jfjoch_process: Works (more or less) 2251a44b1b

jfjoch_viewer: Cleaning user mask not dependent on selected ROI 7d1fa6401c

jfjoch_viewer: Reciprocal space viewer, first edition 487ee4d25b

JFJochViewerReciprocalSpaceWindow: Works, but is very slow b66fa9e5c6

JFJochViewerReciprocalSpaceWindow: OpenGL version, seems to work well baeef1960e

jfjoch_viewer: Work in progress on reciprocal space viewer a2fd0a433f

jfjoch_viewer: Work in progress reciprocal space viewer bf94864af8

jfjoch_viewer: Orthoscopic perspective to better see grid pattern 60d0daabc2

jfjoch_viewer: Pan with right click + center 000 button 55b65381db

JFJOchReader: Add ReadAllSpots option to handle reading just spot finding result 527d239d53

jfjoch_viewer: Reciprocal space viewer allows to digest the whole dataset. aa9f5b1d1e

VERSION: 1.0.0-rc.147 06a3b57700

CHANGELOG 6b46770934

leonarski_f added 1 commit 2026-06-02 11:49:14 +02:00

CHANGELOG 6b46770934

leonarski_f merged commit 75de40f52b into main 2026-06-02 11:49:25 +02:00

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appleb_m (appleb_m) buntschu_d (buntschu_d) duan_j (duan_j) glettig_w (glettig_w) gotthard_g (gotthard_g) leonarski_f (leonarski_f) takaba_k (takaba_k)

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Reference: mx/Jungfraujoch#57