178 Commits

Author	SHA1	Message	Date
Erik Fröjdh	a8225faa17	added parsing of period and exptime	2025-12-18 13:50:25 +01:00
Erik Fröjdh	520d86cec8	removed StringTo/ToString	2025-12-18 12:18:33 +01:00
mazzol_a	fb95e518b4	Dev/interpolation documentation (#255) ... - added transform_eta_values for easier debugging more control for the user - updated Documentation	2025-12-16 13:06:28 +01:00
Erik Fröjdh	80a2b02345	Dev/decode my302 (#254) ... This PR adds support for decoding digital data from the my320 test chip. - Added BitOffset (strong type) - Expand 24 to 32 bit - Python bindings for decoding my302 - Improved docs	2025-12-09 18:27:02 +01:00
mazzol_a	8201c5e999	Fix/mythenfilereading (#250) ... Add counter mask as member of RawFile BugFix: temporarily handle -1 for ROI in mythenfile	2025-11-24 12:29:08 +01:00
mazzol_a	6f7cb4ae30	Merge branch 'main' into dev/license	2025-11-21 14:52:54 +01:00
mazzol_a	267ca87ab0	Dev/rosenblatttransform (#241) ... - added rosenblatttransform - added 3x3 eta methods - interpolation can be used with various eta functions - added documentation for interpolation, eta calculation - exposed full eta struct in python - disable ClusterFinder for 2x2 clusters - factory function for ClusterVector --------- Co-authored-by: Dhanya Thattil <dhanya.thattil@psi.ch> Co-authored-by: Erik Fröjdh <erik.frojdh@psi.ch>	2025-11-21 14:48:46 +01:00
Erik Fröjdh	200ae91622	also hpp	2025-11-21 10:14:14 +01:00
mazzol_a	8989d2eb4a	Merge branch 'main' into dev/expose_sum_2x2_to_python	2025-10-27 19:47:09 +01:00
Erik Fröjdh	ac83eeff9b	added tell and better error checking to cluster file (#239) ... - Check feof and ferror when reading frames - added tell member function to ClusterFile	2025-10-27 15:46:31 +01:00
mazzol_a	01fa61cf47	index now returns enum type	2025-10-23 17:34:54 +02:00
mazzol_a	790dd63ba3	make max_sum_2x2 properly accessible from python	2025-10-23 15:00:52 +02:00
mazzol_a	516ef88d10	adresses SonarQube comments	2025-10-08 18:19:17 +02:00
mazzol_a	5329be816e	removed times 2 in calculated photon center distance	2025-10-08 17:01:38 +02:00
mazzol_a	77a9788891	changed eta interpolation to take into account photon center	2025-10-07 16:48:14 +02:00
mazzol_a	ad3ef88607	changed default DAC value in ScanParameters	2025-10-01 20:37:40 +02:00
mazzol_a	1f46266183	clang-format	2025-10-01 20:25:27 +02:00
mazzol_a	d3d9f760b3	updated parse_json to parse new master json file	2025-10-01 20:17:37 +02:00
mazzol_a	474c35cc6b	Merge branch 'main' into dev/reduce	2025-09-08 15:39:27 +02:00
mazzol_a	12114e7275	added documentation	2025-09-01 15:29:58 +02:00
mazzol_a	7926993bb2	reduction tests for python	2025-09-01 14:15:08 +02:00
mazzol_a	8733a1d66f	added benchmark	2025-08-22 15:14:05 +02:00
mazzol_a	b59277c4bf	3x3 reduction for general cluszter sizes	2025-08-19 12:37:55 +02:00
mazzol_a	cb163c79b4	reduction to 2x2 clusters for general clusters	2025-08-18 18:23:15 +02:00
mazzol_a	f54e76e6bf	view is only allowed on l-value frame (#220) ... Vadym accidentally called view() directly on an R-value frame, which leads to a dangling view pointer. Adjusted code such that compiler throws an error if called on an R-value frame. Co-authored-by: Erik Fröjdh <erik.frojdh@psi.ch>	2025-08-18 11:02:05 +02:00
JFMulvey	c6da36d10b	Fixed the order of cluster.data being incorrect (#221) ... While using the cluster finder and saving a cluster, pixels which are out of bounds are skipped. cluster.data should contain the pedestal corrected ADU information of each pixel. However, the counter "i" which keeps track of the position of cluster.data is only incremented if the pixel was inside the bounds of the frame. This means that any clusters close to the frame's edges are not construed properly. This means that if you want to extract a 3x3 from a 9x9 cluster, it can fail if the cluster data is not properly centered in the pixel. Fixed by moving i++ outside the bounds check. Co-authored-by: Jonathan Mulvey <jonathan.mulvey@psi.ch>	2025-08-14 09:27:02 +02:00
froejdh_e	89bb8776ea	check Ndim on drop_first_dim	2025-07-25 11:44:27 +02:00
froejdh_e	3d6858ad33	removed data_ref	2025-07-25 10:42:47 +02:00
froejdh_e	d6222027d0	move constructor for Ndim-1	2025-07-25 10:40:32 +02:00
mazzol_a	1347158235	templated calculate_pedestal with boolean template argument only_gain0, added drop_dimension to NDArray and reference pointer to data	2025-07-24 15:40:05 +02:00
froejdh_e	b8e91d0282	zero out switching pixels if 2D calibration is used	2025-07-24 12:10:13 +02:00
froejdh_e	46876bfa73	reduced duplicate code	2025-07-24 10:57:02 +02:00
froejdh_e	348fd0f937	removed unused code	2025-07-24 10:14:29 +02:00
froejdh_e	0fea0f5b0e	added safe_divide to NDArray and used it for pedestal	2025-07-24 09:40:38 +02:00
froejdh_e	9a7713e98a	added g0 calibration, pedestal and pixel counting	2025-07-22 16:42:09 +02:00
Erik Fröjdh	9a3694b980	Merge branch 'main' into dev/reduce	2025-07-18 10:19:42 +02:00
Erik Fröjdh	abae2674a9	Apply calibration to Jungfrau raw data (#216) ... - Added function to read calibration file - Multi threaded pedestal subtraction and application of the calibration	2025-07-18 10:19:14 +02:00
Erik Fröjdh	83717571c8	Merge branch 'main' into dev/reduce	2025-06-27 17:10:24 +02:00
Erik Fröjdh	97dae4ac60	added empty() to ClusterVector and fixed docs (#209) ... - added ClusterVector::empty() to check if the vector is empty - Fixed generation of missing docs for ClusterVector	2025-06-27 17:00:46 +02:00
froejdh_e	5a9c3b717e	naive implementation of 3x3 and 5x5 reduction	2025-06-27 16:36:21 +02:00
Erik Fröjdh	e3f4b34b72	Const element access and fixed comparing bug (#208) ... - Added const element access - Added const data* - Fixed bug comparing two Views of same size but different shapes closes #207	2025-06-27 14:13:51 +02:00
mazzol_a	318e640639	only test over the public interface	2025-06-23 17:27:13 +02:00
mazzol_a	c6990dabad	deleted unused variables	2025-06-23 17:27:13 +02:00
mazzol_a	9f8eee5d08	fixed python bindings - only read headers of modules that are in the roi	2025-06-16 11:07:00 +02:00
mazzol_a	b13f864b2b	need n_modules	2025-06-13 17:01:13 +02:00
mazzol_a	0f56846e3d	deleted some commented lines	2025-06-13 16:33:25 +02:00
mazzol_a	be67bbab6b	extended DetectorGeometry class with find_geometry, update_geometry (refactoring)	2025-06-13 16:16:23 +02:00
mazzol_a	bd7870e75a	review comments	2025-06-12 18:14:48 +02:00
mazzol_a	75f63607fc	friend_test macro	2025-06-12 17:46:10 +02:00
mazzol_a	19ecc82fff	solved merge conflict	2025-06-10 17:01:40 +02:00