Commit Graph

1644 Commits

Author SHA1 Message Date
e27de35dff Merge branch '120-openmpi-version-4-0-5' into 'master'
Resolve "openmpi: version 4.0.5"

Closes #120

See merge request Pmodules/buildblocks!164
2021-02-24 14:08:17 +01:00
c91ce5031d openmpi: version 4.0.5 added for rhel6 2021-02-24 14:07:46 +01:00
adb140bdc6 openmpi: build-script reviewed
- build without sge suppotz
- use UCX module
2021-02-24 14:07:07 +01:00
c332d46212 Merge branch '119-cmake-build-version-3-19-2' into 'master'
Resolve "cmake: build version 3.19.2"

Closes #119

See merge request Pmodules/buildblocks!163
2021-02-24 13:57:35 +01:00
b4f4e417b6 cmake: version 3.19.2 build for rhel6 2021-02-24 13:57:18 +01:00
283e9e1b21 Merge branch '118-git-2-30-0-for-rhel6' into 'master'
Resolve "git 2.30.0 for rhel6"

Closes #118

See merge request Pmodules/buildblocks!162
2021-02-24 13:54:22 +01:00
0891aa03f0 git: version 2.30.0 build for rhel6 2021-02-24 13:53:26 +01:00
370f2dcf71 Merge branch '117-openblas-0-3-13' into 'master'
Resolve "OpenBLAS 0.3.13"

Closes #117

See merge request Pmodules/buildblocks!161
2021-02-24 13:45:15 +01:00
975a836248 OpenBLAS: build reviewed for version 0.3.13 2021-02-24 13:43:17 +01:00
5204a351f4 OpanBLAS: version 0.3.13 added 2021-02-24 13:42:41 +01:00
06a5fa983a OpenBLAS: old build script renamed 2021-02-24 13:41:59 +01:00
4b2d3a5d7e Merge branch 'relion-openmpi-update' into 'master'
Relion: new versions and deprecations

See merge request Pmodules/buildblocks!160
2021-01-22 21:51:56 +01:00
782e89c578 Major Relion recompilation using newer openmpi
- Add relion/2.1 with openmpi/4.0.4_slurm
- Add relion/3.0.8-1 with openmpi/4.0.5_slurm
- Mark 3.1.0-1 and 3.1.1 as stable
- Deprecate all older versions (betas and versions with openmpi/3.1.4
  and older, which don't work with the current configuration)
2021-01-22 21:34:09 +01:00
c9978118c5 Setting cuda versions to stable
These are pretty well tested via relion. There was a slight question
about 11.0.3 with kokkos, but it seems to be specific to that package.
2021-01-22 21:31:57 +01:00
b912d39d9e Merge branch 'openmpi4.0.5_prod' into 'master'
Openmpi4.0.5 prod

See merge request Pmodules/buildblocks!159
2021-01-22 15:32:48 +01:00
Caubet Serrabou Marc
4b67a544aa OpenMPI 4.0.5 4.0.4 3.1.6 to stable 2021-01-22 11:46:27 +01:00
Caubet Serrabou Marc
6705712b24 intel/20.4 to stable 2021-01-22 11:43:03 +01:00
6754daae16 Merge branch 'dynamo' into 'master'
Fix dynamo license in modulefile

See merge request Pmodules/buildblocks!158
2020-12-17 17:17:20 +01:00
94901de619 Fix dynamo license in modulefile 2020-12-17 17:16:41 +01:00
bc1043cc1c Merge branch 'dynamo' into 'master'
Initial dynamo/1.1.514 buildblock

See merge request Pmodules/buildblocks!157
2020-12-17 11:17:25 +01:00
b841630e95 Merge branch 'cistem' into 'master'
Add cisTEM modulefile

See merge request Pmodules/buildblocks!155
2020-12-17 11:17:10 +01:00
21c3278e96 Initial dynamo/1.1.514 buildblock 2020-12-17 11:13:18 +01:00
0660ba35f4 Merge branch 'patch-1' into 'master'
Update build

See merge request Pmodules/buildblocks!156
2020-12-14 14:18:36 +01:00
26fcf329a5 Update build 2020-12-14 14:18:06 +01:00
51436c8166 Adding preallocated scripts 2020-12-11 15:28:02 +01:00
451d3db6f4 Add cisTEM modulefile
No new versions are available
2020-12-11 15:22:36 +01:00
7b80d1b5c5 Merge branch '115-build-gnuplot-5-4-0module-for-linux' into 'master'
Resolve "build gnuplot/5.4.0module for Linux"

Closes #115

See merge request Pmodules/buildblocks!154
2020-12-04 17:41:19 +01:00
Achim Gsell
75ebaeedcf gnuplot/5.4.0 added 2020-12-04 17:40:12 +01:00
Achim Gsell
ca0ffad150 gnuplot build script reviewed 2020-12-04 17:39:26 +01:00
92aa5ee3e8 Merge branch 'paraview' into 'master'
Removed Paraview 5.8.0 (was not installed)

See merge request Pmodules/buildblocks!153
2020-12-03 16:43:22 +01:00
Caubet Serrabou Marc
be3d4688c5 Removed Paraview 5.8.0 (was not installed) 2020-12-03 16:42:58 +01:00
c79b48014e Merge branch 'paraview' into 'master'
Added Paraview automatic installation

See merge request Pmodules/buildblocks!152
2020-12-03 16:41:59 +01:00
Caubet Serrabou Marc
21210530b4 Added Paraview automatic installation 2020-12-03 16:41:27 +01:00
810228eb7a Merge branch 'openmpi405_slurm_cuda' into 'master'
openmpi/4.0.5_slurm

See merge request Pmodules/buildblocks!151
2020-12-03 10:49:57 +01:00
Caubet Serrabou Marc
16a4bc7d23 openmpi/4.0.5_slurm 2020-12-03 10:48:42 +01:00
7974687dae Merge branch 'em' into 'master'
New EM versions

See merge request Pmodules/buildblocks!150
2020-11-18 21:12:50 +01:00
3d0560a0f3 Release relion 3.1.1 2020-11-18 21:09:21 +01:00
5bdf6b2952 Add Gctf buildblock
No new versions were installed, but this documents the build process and
updates the modulefile.
2020-11-18 21:09:20 +01:00
b28e9a8a39 Add Gautomatch buildblock
No new versions were installed, but this documents the build process and
updates the modulefile.
2020-11-18 21:09:20 +01:00
8014c16e2a Add MotionCor2 1.3.1, 1.3.2, & 1.4.0 2020-11-18 21:09:20 +01:00
e173ae9dd1 Add relion 3.1.0-1 variant 2020-11-18 21:09:20 +01:00
7e5d91d9f4 Merge branch '114-mithra-use-source-from-arya' into 'master'
Resolve "MITHRA use source from Arya"

Closes #114

See merge request Pmodules/buildblocks!149
2020-11-16 17:02:00 +01:00
2393bdae8e MITHRA: download from Arya's repo 2020-11-16 17:01:34 +01:00
194ed07ecb Merge branch '113-mithra-new-build-block' into 'master'
Resolve "MITHRA: new build block"

Closes #113

See merge request Pmodules/buildblocks!148
2020-11-16 16:36:56 +01:00
18beaf08c7 MITHRA: new build-block added 2020-11-16 16:36:33 +01:00
6ae4757ac3 Merge branch '112-uncrustify-new-build-block' into 'master'
Resolve "uncrustify: new build-block"

Closes #112

See merge request Pmodules/buildblocks!147
2020-11-16 16:16:52 +01:00
Achim Gsell
50c812b179 uncrustify: build-block added 2020-11-16 16:16:28 +01:00
5e237b6dce Merge branch '111-clang-write-build-block' into 'master'
Resolve "clang: write build-block"

Closes #111

See merge request Pmodules/buildblocks!146
2020-11-16 16:11:13 +01:00
Achim Gsell
0f1b3a7d0d clang: new build-block added 2020-11-16 16:10:59 +01:00
9255c37af9 Merge branch '110-amrex-18-07_3d-release-as-stable' into 'master'
Resolve "amrex/18.07_3d: release as stable"

Closes #110

See merge request Pmodules/buildblocks!145
2020-11-16 16:06:41 +01:00