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Merge branch 'relion-openmpi-update' into 'master'

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Relion: new versions and deprecations

See merge request Pmodules/buildblocks!160
This commit is contained in:
bliven_s
2021-01-22 21:51:56 +01:00
parent b912d39d9e 782e89c578
commit 4b2d3a5d7e
3 changed files with 14 additions and 10 deletions
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17
EM/relion/files/variants
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@@ -1,8 +1,9 @@
relion/2.1.b1 stable gcc/4.9.4 openmpi/2.0.1 cuda/8.0.44
relion/3.0_beta stable gcc/4.9.4 openmpi/2.0.1 cuda/8.0.44
relion/3.0.8 stable gcc/7.4.0 openmpi/3.1.4_merlin6 cuda/9.2.148 b:cmake/3.14.0 b:tiff/4.0.9
relion/3.1-beta unstable gcc/7.4.0 openmpi/3.1.4_merlin6 cuda/9.2.148 b:cmake/3.14.0 b:tiff/4.0.9
relion/3.1.0 stable gcc/7.5.0 openmpi/4.0.4_slurm cuda/10.0.130 b:cmake/3.15.5 b:tiff/4.0.9 b:git/2.22.0
relion/3.1.0-1 unstable gcc/7.5.0 openmpi/4.0.4_slurm cuda/10.1.105 b:cmake/3.15.5 b:tiff/4.0.9 b:git/2.22.0
relion/3.1.1 unstable gcc/9.3.0 openmpi/4.0.4_slurm cuda/11.0.3 b:cmake/3.15.5 b:tiff/4.0.9 b:git/2.22.0
relion/2.1.b1 deprecated gcc/4.9.4 openmpi/2.0.1 cuda/8.0.44
relion/2.1 stable gcc/9.3.0 openmpi/4.0.4_slurm cuda/11.0.3 b:cmake/3.15.5 b:tiff/4.0.9 b:git/2.22.0
relion/3.0_beta deprecated gcc/4.9.4 openmpi/2.0.1 cuda/8.0.44
relion/3.0.8 deprecated gcc/7.4.0 openmpi/3.1.4_merlin6 cuda/9.2.148 b:cmake/3.14.0 b:tiff/4.0.9
relion/3.0.8-1 stable gcc/9.3.0 openmpi/4.0.5_slurm cuda/11.0.3 b:cmake/3.15.5 b:tiff/4.0.9 b:git/2.22.0
relion/3.1-beta deprecated gcc/7.4.0 openmpi/3.1.4_merlin6 cuda/9.2.148 b:cmake/3.14.0 b:tiff/4.0.9
relion/3.1.0 deprecated gcc/7.5.0 openmpi/4.0.4_slurm cuda/10.0.130 b:cmake/3.15.5 b:tiff/4.0.9 b:git/2.22.0
relion/3.1.0-1 stable gcc/7.5.0 openmpi/4.0.4_slurm cuda/10.1.105 b:cmake/3.15.5 b:tiff/4.0.9 b:git/2.22.0
relion/3.1.1 stable gcc/9.3.0 openmpi/4.0.4_slurm cuda/11.0.3 b:cmake/3.15.5 b:tiff/4.0.9 b:git/2.22.0

2
EM/relion/modulefile
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@@ -44,4 +44,4 @@ setenv RELION_RESMAP_EXECUTABLE /opt/psi/EM/ResMap/1.1.4/bin/ResMap
# Version-specific variables
setenv RELION_QSUB_TEMPLATE /opt/psi/EM/relion/$V/scripts/multi_gpu.sh
setenv RELION_MOTIONCOR2_EXECUTABLE /opt/psi/EM/MotionCor2/1.4.0/bin/MotionCor2_1.4.0_Cuda110
setenv RELION_MOTIONCOR2_EXECUTABLE /opt/psi/EM/MotionCor2/1.4.0/bin/MotionCor2

5
Programming/cuda/files/variants.rhel6
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@@ -3,4 +3,7 @@ cuda/9.0.176 stable
cuda/9.1.85 stable
cuda/9.2.148 stable
cuda/10.0.130 stable
cuda/10.1.105 unstable
cuda/10.1.105 stable
cuda/11.0.3 stable
cuda/11.1.0 stable
cuda/11.1.1 stable