Replace all class components with function components and move server-state
polling to @tanstack/react-query.
- add @tanstack/react-query; generate query helpers via the hey-api
@tanstack/react-query plugin (src/client/@tanstack)
- QueryClientProvider + one-time client.setConfig({ baseUrl: '' }) in index.tsx
- App polls statistics with useQuery(getStatisticsOptions, refetchInterval),
DataProcessingPlot uses getPreviewPlotOptions; manual setInterval polling gone
- memo() on presentational children; with TanStack structural sharing this
re-renders a child only when its own statistics slice changes
- PreviewImage stays imperative (binary JPEG -> object URL) using useEffect +
a ref for the object-URL lifecycle
- fix AzIntSettings correction checkboxes that mutated state in place (relied on
the poll re-render); they now use setState
- drop dead code uncovered during the port (unused upload/deactivate handlers
and imports in ImageFormatSettings, DetectorSettings, ROI)
Build (tsc + vite) passes; dev server transforms all entry modules.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
The receiver already computes and stores the compression ratio per image
(JFJochReceiverPlots Add/GetPlots/GetPlotRaw all handle PlotType::CompressionRatio),
but the type was unreachable from the API: it was missing from ConvertPlotType,
the OpenAPI plot_type enum, and the TS client, so requesting it returned 500 and
no UI menu entry existed.
Wire it through all layers:
- broker: add the compression_ratio -> PlotType::CompressionRatio case in
ConvertPlotType.
- spec: add compression_ratio to the plot_type parameter enum.
- frontend: add COMPRESSION_RATIO to the generated plot_type enum (matches what
regeneration would produce), a "Compression ratio" menu entry, and a Y-axis
label.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
- App: make getValues an arrow field so its `this` survives being passed
as the `update` prop (the post-edit statistics refresh was broken).
- DataProcessingSettings: guard prop sync with last_downloaded_s + _.isEqual
so the 1 s statistics poll no longer overwrites a slider mid-edit
(reference `!=` on a freshly-parsed object was always true → snap-back).
- DataCollection: collapse nested setState in grid-scan callbacks.
- PreviewImage: build an immutable settings copy instead of mutating state
in place; fix stale comment.
- MultiLinePlotWrapper: drop per-render console.log; render via a custom
Plot built on plotly.js-cartesian-dist-min (scatter+heatmap only),
cutting the main bundle 6.0->2.6 MB (1.8->0.8 MB gzip).
- package.json: remove dead react-scripts test/eject scripts and CRA
eslintConfig, move @redocly/cli to devDependencies.
- Delete unused CRA scaffolding (serviceWorker.js, react-app-env.d.ts,
setupTests.js).
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
* jfjoch_broker: When in FPGA workflow (with PSI detectors) azimuthal integration might be forced to CPU - this will require more computational power, but it enables more integration bins and reports standard deviation of each bin.
* jfjoch_broker: Raise error if one is in FPGA flow and there are too many azimuthal integration bins.
Reviewed-on: #60
This is an UNSTABLE release. The release has significant modifications for data processing - in case of troubles go back to 1.0.0-rc.144.
* jfjoch_broker: Improve azimuthal integration (add <I^2> calculation)
* jfjoch_broker: Fixes around indexing, aiming to handle multi-lattice crystals (work in progress, it is not fully integrated)
* jfjoch_writer: Save mean(I), stddev(I), and count(I) for each azimuthal bin
Reviewed-on: #58
This is an UNSTABLE release. The release has significant modifications for data processing - in case of troubles go back to 1.0.0-rc.144.
jfjoch_process: Generate a dedicated file (_process.h5), which can be used as a replacement for the _master.h5 file for a reanalyzed dataset.
jfjoch_process: Improve the performance of scaling and merging, implement on the fly scaling.
jfjoch_writer: All final data analysis results are repopulated in the _master.h5 file.
jfjoch_scale: Dedicated tool for rescaling/merging existing data.
jfjoch_viewer: Fix bugs where pixel labels where displayed on a wrong pixel.
WARNING! Scaling and merging are experimental at the moment, and may not provide reasonable results for the time being.
Reviewed-on: #56
This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132.
* jfjoch_broker: Azimuthal integration mapping is generated with parallel computations, significantly reducing setup times
* frontend: Fix selection of FFTW in indexing settings
Reviewed-on: #51
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>
This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132.
* jfjoch_broker: Further reduce startup time for DECTRIS detectors by selectively modifying SIMPLON parameters on `/start`
* jfjoch_broker: Further reduce startup time for DECTRIS detectors by not setting beam center and detector distance via SIMPLON API on '/start'
* jfjoch_broker: Add an extra message to ZeroMQ puller ready to monitor Lite worklow preparation time
* jfjoch_broker: Image buffer configuration is postponed for Lite receiver flow till start message is received
* jfjoch_broker: Use nanoseconds internally for frame/image/readout time
* jfjoch_broker: Extra messages added for receiver operation (to be removed after debugging finished)
* jfojch_broker: Improve profiling of different data analysis steps
* jfjoch_broker: Record integration reflection count
* jfjoch_broker: Fix bug where ZeroMQ preview frequency was confusing time units (micro vs. milliseconds)
* jfjoch_broker: Fix bug where '/wait_till_done' got deadlocked
* jfjoch_writer: Fix confusion between NaN and zero in floating-point datasets
**Breaking changes**: detector definition is now using nanoseconds to define minimum frame time, minimum count time and readout time.
Reviewed-on: #49
This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132.
* jfjoch_broker: Improve logic regarding indexing architecture and thread pools (work in progress).
Reviewed-on: #45
This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132.
* Multiple small bug fixes scattered across the whole code base. (detected with GPT-5.4)
* jfjoch_viewer: Improve image render performance
Reviewed-on: #44
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>
This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132.
* jfjoch_broker: Add better locking for detector object - should help, when detector initialization takes too long
* jfjoch_writer: Enable writing single, integrated HDF5 file with both data and metadata
* XDS plugin: Add generation of Jungfraujoch plugin for XDS
* CI: Add tests with XDS and DIALS (`xia2.ssx`)
Reviewed-on: #43
This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132.
* jfjoch_broker: Use httplib for HTTP server instead of Pistache
* jfjoch_broker: Drop OpenSSL support
* jfjoch_broker: Base work for multi-lattice support in the future
* Update dependencies to more recent versions (spdlog, HDF5, Catch2, httplib)
Reviewed-on: #41
This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.124.
* jfjoch_broker: Significant improvements in TCP image socket, as a viable alternative for ZeroMQ sockets (only a single port on broker side, dynamically change number of writers, acknowledgments for written files)
* jfjoch_broker: Delta phi is calculated also for still data in Bragg prediction
* jfjoch_broker: Image pusher statistics are accessible via the REST interface
* jfjoch_writer: Supports TCP image socket and for these auto-forking option
Reviewed-on: #36
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>
This is an UNSTABLE release. This version adds scalign and merging. These are experimental at the moment, and should not be used for production analysis.
If things go wrong with analysis, it is better to revert to 1.0.0-rc.124.
* jfjoch_broker: Improve logic on switching on/off spot finding
* jfjoch_broker: Increase maximum spot count for FFBIDX to 65536
* jfjoch_broker: Increase default maximum unit cell for FFT to 500 A (could have performance impact, TBD)
* jfjoch_process: Add scalign and merging functionality - program is experimental at the moment and should not be used for production analysis
* jfjoch_viewer: Display partiality and reciprocal Lorentz-polarization correction for each reflection
* jfjoch_writer: Save more information about each reflection
Reviewed-on: #32
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>
This is an UNSTABLE release.
* jfjoch_broker: Use newer version of Google Ceres for (potential) CUDA 13 compatibility
* jfjoch_broker: Improve performance of generating preview images, especially for large detectors (9M-16M)
* jfjoch_viewer: Improve performance of displaying images, especially for large detectors (9M-16M)
* jfjoch_viewer: Add more color schemes for better image readability
* HDF5: Common mutex for reading and writing HDF5 if both operations were to happen in the same executable
* HDF5: suppress warning if path (upstream group) doesn't exists when checking if leaf exists
Reviewed-on: #30
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>
This is an UNSTABLE release and not recommended for production use (please use rc.111 instead).
* jfjoch_broker: Add binary export of data analysis plots over OpenAPI
* jfjoch_broker: Minor fixes to HTTP error handling
* jfjoch_viewer: Prefer binary plots over JSON plots
* jfjoch_viewer: Change foreground with F button + wheel
* jfjoch_viewer: Change way how angles are displayed
* jfjoch_viewer: Display resolution of the mouse cursor in top left corner
Reviewed-on: #26
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>
This is an UNSTABLE release and not recommended for production use (please use rc.11 instead).
* jfjoch_broker: Experimental rotation (3D) indexing
* jfjoch_broker: Minor fix to error in optimizer potentially returning NaN values
Reviewed-on: #18
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>
This is an UNSTABLE release.
* jfjoch_broker: Add auto-contrast option for preview images
* Frontend: Add logo image
* jfjoch_viewer: Add logo image
* jfjoch_viewer: For image chart allow to set min value to zero
* jfjoch_viewer: For resolution estimation plots, visualization uses 1/d^2 as measure
* jfjoch_viewer: Add 3D unit cell visualization (experimental/WIP/not really there)
* Documentation: Add logo image
Reviewed-on: #16
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>
This is an UNSTABLE release.
jfjoch_broker: Fix output during mask data collection
Reviewed-on: #4
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>
This is an UNSTABLE release and not recommended for production use (please use rc.96 instead).
* jfjoch_broker: For DECTRIS detectors fix dark data collection during initialization
Reviewed-on: #3
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>
This is an UNSTABLE release.
* Fixes in CI pipeline
* jfjoch_broker: Remove PNG preview, no dependency on libpng
* jfjoch_writer: Fix UTC timestamp being generated wrong (mix between milli- and microseconds)
* jfjoch_viewer: Show data collection time in dataset tooltip
* jfjoch_viewer: Allow to choose the calibrant (presets for LaB6 and silver behenate)
* jfjoch_viewer: Auto foreground value
* Use external libjpeg-turbo and libtiff: simpler build stack, these are built and linked statically in automated Docker builds
* Remove OpenBLAS dependency
Reviewed-on: #1
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>
leonarski_fandClaude Opus 4.8