zmq

Version defs and checking pointer before delete

.clang-tidy

@@ -17,7 +17,8 @@ Checks:          '*,
                     -google-runtime-references, 
                     -google-readability-todo, 
                     -google-readability-braces-around-statements,
-                    -modernize-use-trailing-return-type'
+                    -modernize-use-trailing-return-type,
+                    -readability-isolate-declaration'
 
 HeaderFilterRegex: \.h
 AnalyzeTemporaryDtors: false

.gitignore

@@ -7,6 +7,7 @@ bin/
 *.out
 *.toc
 *.o
+*.so
 .*
 build
 RELEASE.txt

.travis.yml

@@ -4,39 +4,25 @@ language: cpp
 
 os: linux
 
-env: 
-  matrix: 
-     - CONDA_PY=3.6
-     - CONDA_PY=3.7
-     - CONDA_PY=3.8
-
-
-dist: trusty
+dist: bionic
 
 install:
   - sudo apt-get update
   - ldd --version
   - wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh;
   - bash miniconda.sh -b -p $HOME/miniconda
-  - export PATH="$HOME/miniconda/bin:$PATH"
+  - source "$HOME/miniconda/etc/profile.d/conda.sh"
   - rm -f miniconda.sh
   - hash -r
   - conda config --set always_yes yes --set changeps1 no
   - conda config --add channels conda-forge
   - conda config --add channels slsdetectorgroup
-  - conda update conda
-  - conda update --all
-  - conda install conda-build=3.17 
-  - conda install anaconda-client
-  - conda install conda-verify
-
-  # Useful for debugging any issues with conda
+  - conda update -q conda
   - conda info -a
 
-
-  # Replace dep1 dep2 ... with your dependencies
-  - conda create -q -n test-environment python=$CONDA_PY
-  - source activate test-environment
+  # Useful for debugging any issues with conda
+  - conda create -q -n testenv conda-build anaconda-client conda-verify
+  - conda activate testenv
   - conda-build .
 
 script:
@@ -45,7 +31,8 @@ script:
 
 deploy:
   provider: script
-  script: find $HOME/miniconda/conda-bld/${TRAVIS_OS_NAME}-64 -name "*.tar.bz2" -exec anaconda -t $CONDA_TOKEN upload --force {} \;
+  script: find $HOME/miniconda/envs/testenv/conda-bld/${TRAVIS_OS_NAME}-64 -name "*.tar.bz2" -exec anaconda -t $CONDA_TOKEN upload --force {} \;
   on:
     branch: developer
+    tags: true
 

CMakeLists.txt

@@ -1,8 +1,8 @@
-cmake_minimum_required(VERSION 3.11)
+cmake_minimum_required(VERSION 3.12)
 project(slsDetectorPackage)
 set(PROJECT_VERSION 5.0.0)
 include(CheckIPOSupported)
-
+set(CMAKE_CXX_FLAGS_RELEASE "-O3 -DNDEBUG")
 
 cmake_policy(SET CMP0074 NEW)
 include(cmake/project_version.cmake)
@@ -44,6 +44,9 @@ option(SLS_USE_PYTHON "Python bindings" OFF)
 option(SLS_USE_CTBGUI "ctb GUI" OFF)
 option(SLS_BUILD_DOCS "docs" OFF)
 option(SLS_BUILD_EXAMPLES "examples" OFF)
+option(SLS_TUNE_LOCAL "tune to local machine" OFF)
+
+
 set(CMAKE_EXPORT_COMPILE_COMMANDS ON)
 
 if (NOT CMAKE_BUILD_TYPE AND NOT CMAKE_CONFIGURATION_TYPES)
@@ -111,6 +114,11 @@ if(SLS_USE_SANITIZER)
     # target_link_libraries(slsProjectOptions INTERFACE -fsanitize=thread)
 endif()
 
+if(SLS_TUNE_LOCAL)
+    target_compile_options(slsProjectOptions INTERFACE -mtune=native -march=native)
+endif()
+
+
 #rapidjson
 add_library(rapidjson INTERFACE)
 target_include_directories(rapidjson INTERFACE
@@ -126,7 +134,7 @@ install(TARGETS slsProjectOptions slsProjectWarnings rapidjson
 )
 
 set(CMAKE_POSITION_INDEPENDENT_CODE ON)
-set(CMAKE_INSTALL_RPATH "$ORIGIN")
+set(CMAKE_INSTALL_RPATH $ORIGIN)
 # set(CMAKE_BUILD_WITH_INSTALL_RPATH TRUE)
 set(CMAKE_BUILD_WITH_INSTALL_RPATH FALSE)
 
@@ -159,7 +167,7 @@ endif (SLS_USE_RECEIVER)
 
 if (SLS_USE_GUI)   
     find_package(Qt4 REQUIRED)
-    find_package(Qwt 6 REQUIRED)
+    find_package(Qwt 6.1 REQUIRED)
     if (QT4_FOUND AND QWT_FOUND)
         add_subdirectory(slsDetectorGui)
     endif()
@@ -174,6 +182,7 @@ if (SLS_USE_INTEGRATION_TESTS)
 endif (SLS_USE_INTEGRATION_TESTS)
 
 if (SLS_USE_PYTHON)
+    set(PYBIND11_CPP_STANDARD -std=c++11)
     add_subdirectory(libs/pybind11)
     add_subdirectory(python)
 endif(SLS_USE_PYTHON)
@@ -194,11 +203,9 @@ if(SLS_BUILD_DOCS)
     add_subdirectory(docs)
 endif(SLS_BUILD_DOCS)
 
-
-
 if(SLS_MASTER_PROJECT)
     # Set install dir CMake packages
-    set(CMAKE_INSTALL_DIR ${CMAKE_INSTALL_DATADIR}/cmake/sls)
+    set(CMAKE_INSTALL_DIR "share/cmake/${PROJECT_NAME}")
     # Set the list of exported targets
     set(PROJECT_LIBRARIES slsSupportLib slsDetectorShared slsReceiverShared)
     # Generate and install package config file and version

README.md

@@ -2,90 +2,67 @@
 Detailed documentation can be found on the [official site.](https://www.psi.ch/detectors/users-support)
 
 ### Binaries
-Documentation to obtain the binaries via the conda package is available for [lib](https://github.com/slsdetectorgroup/sls_detector_lib) and [gui](https://github.com/slsdetectorgroup/sls_detector_gui)
+Binaries for the slsDetectorPackage are available through conda. 
+```
+#Add conda channels
+conda config --add channels conda-forge
+conda config --add channels slsdetectorgroup
+
+conda install slsdetlib   #only shared lib and command line
+conda install slsdet      #python bindings (includes slsdetlib)
+conda install slsdetgui   #gui (includes qt4)
+
+#Install specific version
+conda install slsdet=2020.03.02.dev0 #developer version from 3 March 2020
+
+```
 
 ### Source code
-One can also obtain the source code from this repository and compile while realizing the setup dependencies as required.
+One can also obtain the source code from this repository and compile.
 ```
 git clone https://github.com/slsdetectorgroup/slsDetectorPackage.git
 
 ```
-#### Setup dependencies 
-* Gui Client <br>
-Requirements: Qt 4.8 and Qwt 6.0
-```
-    export QTDIR=/usr/local/Trolltech/
-    export QWTDIR=/usr/local/qwt-6.0.1/
-```
-If either of them does not exist, the GUI client will not be built.
+#### Dependencies 
+* Lib: c++11 compiler (gcc=>4.8), ZeroMQ 4
+* Gui: Qt 4.8 and Qwt 6.0
+* Calibration wizards and ctbGUI: ROOT
+* Optional: HDF5
 
-* Advanced user Calibration wizards<br>
-Requirements: ROOT
-```
-    export ROOTSYS=/usr/local/root-5.34
-```
 
 #### Compilation 
 
-Compiling can be done in two ways.
+Compiling can be done in two ways. Either with the convenience script
+cmk.sh or directly with cmake for more control.
 
 **1. Compile using script cmk.sh**<br>
 
 After compiling, the libraries and executables will be found in `slsDetectorPackage/build/bin` directory<br>
 
-Usage: [-c] [-b] [-h] [-d HDF5 directory] [-j]<br>
- * -[no option]: only make<br>
- * -c: Clean<br>
- * -b: Builds/Rebuilds CMake files normal mode<br>
- * -h: Builds/Rebuilds Cmake files with HDF5 package<br>
- * -d: HDF5 Custom Directory<br>
- * -t: Build/Rebuilds only text client<br>
- * -r: Build/Rebuilds only receiver<br>
- * -g: Build/Rebuilds only gui<br>
- * -j: Number of threads to compile through<br>
- * -e: Debug mode
- 
-Basic Option:
-./cmk.sh -b
- 
-For only make:
-./cmk.sh
-
-For make clean;make:
-./cmk.sh -c
-
-For using hdf5 without custom dir /blabla:
-./cmk.sh -h -d /blabla
-
-For rebuilding cmake without hdf5 
-./cmk.sh -b
-
-For using multiple cores to compile faster:
-./cmk.sh -j9<br>
-
-
-For rebuilding only certain sections<br>
-./cmk.sh -tg #only text client and gui<br>
-./cmk.sh -r #only receiver<br>
+Usage: [-c] [-b] [-p] [e] [t] [r] [g] [s] [u] [i] [-h] [-d <HDF5 directory>] [-j] <Number of threads>
+ -[no option]: only make
+ -c: Clean
+ -b: Builds/Rebuilds CMake files normal mode
+ -p: Builds/Rebuilds Python API
+ -h: Builds/Rebuilds Cmake files with HDF5 package
+ -d: HDF5 Custom Directory
+ -t: Build/Rebuilds only text client
+ -r: Build/Rebuilds only receiver
+ -g: Build/Rebuilds only gui
+ -s: Simulator
+ -u: Chip Test Gui
+ -j: Number of threads to compile through
+ -e: Debug mode
+ -i: Builds tests
   
+eg. Rebuild when you switch to a new build and compile in parallel:
+./cmk.sh -bj5
 
 **2. Compile without script**<br>
-Use cmake to create out-of-source builds, by creating a build folder parallel to source directory.
+Use cmake to create out-of-source builds, by creating a build folder parallel to source directory. This would create a debug build with address sanitizers.
 ```
-    $ cd ..
-    $ mkdir slsDetectorPackage-build
-    $ cd slsDetectorPackage-build
-    $ cmake ../slsDetectorPackage  -DCMAKE_BUILD_TYPE=Debug -DSLS_USE_HDF5=OFF 
-    $ make
-```
-
-Use the following as an example to compile statically and using specific hdf5 folder
-```
-    $ HDF5_ROOT=/opt/hdf5v1.10.0 cmake ../slsDetectorPackage -DCMAKE_BUILD_TYPE=Debug -DSLS_USE_HDF5=ON
- ```  
-After compiling, the libraries and executables will be found at `bin` directory
-```
-    $ ls bin/
-    gui_client  libSlsDetector.a  libSlsDetector.so  libSlsReceiver.a  libSlsReceiver.so
-    sls_detector_acquire  sls_detector_get  slsDetectorGui  sls_detector_help  sls_detector_put  slsReceiver slsMultiReceiver
+    $ mkdir build
+    $ cd build
+    $ cmake ../slsDetectorPackage  -DCMAKE_BUILD_TYPE=Debug -DSLS_USE_SANITIZER=ON
+    $ make -j12 #or whatever number of threads wanted
 ```

RELEASE.txt

@@ -0,0 +1,2 @@
+Draft
+- dr 4, 8, 16 in eiger -> speed 0, 32 stays same (speed 1)

cmake/package_config.cmake

@@ -15,17 +15,20 @@ configure_package_config_file(
 write_basic_package_version_file(
   "${PROJECT_BINARY_DIR}/${PROJECT_NAME_LOWER}-config-version.cmake"
   VERSION ${PROJECT_VERSION}
-  COMPATIBILITY SameMajorVersion)
+  COMPATIBILITY SameMajorVersion
+)
 
 install(FILES
   "${PROJECT_BINARY_DIR}/${PROJECT_NAME_LOWER}-config.cmake"
   "${PROJECT_BINARY_DIR}/${PROJECT_NAME_LOWER}-config-version.cmake"
   COMPONENT devel
-  DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${PROJECT_NAME_LOWER})
+  DESTINATION ${CMAKE_INSTALL_DIR}
+)
 
 if (PROJECT_LIBRARIES OR PROJECT_STATIC_LIBRARIES)
   install(
     EXPORT "${TARGETS_EXPORT_NAME}"
     FILE ${PROJECT_NAME_LOWER}-targets.cmake
-    DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${PROJECT_NAME_LOWER})
+    DESTINATION ${CMAKE_INSTALL_DIR}
+    )
 endif ()

cmk.sh

@@ -187,8 +187,8 @@ fi
 
 #Debug
 if [ $DEBUG -eq 1 ]; then
-	CMAKE_POST+=" -DCMAKE_BUILD_TYPE=Debug "
-# CMAKE_POST+=" -DCMAKE_BUILD_TYPE=Debug -DSLS_USE_SANITIZER=ON "
+#	CMAKE_POST+=" -DCMAKE_BUILD_TYPE=Debug "
+	CMAKE_POST+=" -DCMAKE_BUILD_TYPE=Debug -DSLS_USE_SANITIZER=ON "
 	echo "Debug Option enabled"
 fi 
 

conda-recepie/build.sh

@@ -1,3 +1,4 @@
+
 mkdir build
 mkdir install
 cd build
@@ -6,7 +7,7 @@ cmake .. \
       -DCMAKE_INSTALL_PREFIX=install \
       -DSLS_USE_TEXTCLIENT=ON \
       -DSLS_USE_RECEIVER=ON \
-      -DSLS_USE_GUI=OFF \
+      -DSLS_USE_GUI=ON \
       -DSLS_USE_TESTS=ON \
       -DSLS_USE_PYTHON=OFF \
       -DCMAKE_BUILD_TYPE=Release \

conda-recepie/build_pylib.sh

@@ -1,14 +1,4 @@
 
-# mkdir $PREFIX/lib
-# mkdir $PREFIX/include
-
-
-# #Shared and static libraries
-# cp build/bin/_sls_detector* $PREFIX/lib/.
-
-
-# #Binaries
-# cp -r build/bin/sls_detector $PREFIX/lib/.
-
+echo "|<-------- starting python build"
 cd python
 ${PYTHON} setup.py install

conda-recepie/conda_build_config.yaml

@@ -0,0 +1,7 @@
+python:
+    - 3.6
+    - 3.7
+    - 3.8
+    
+numpy: 
+    - 1.17

conda-recepie/copy_ctbgui.sh

@@ -0,0 +1,9 @@
+mkdir $PREFIX/lib
+mkdir $PREFIX/bin
+mkdir $PREFIX/include
+
+
+
+cp build/bin/ctbGui $PREFIX/bin/.
+cp build/bin/libctbRootLib.so $PREFIX/lib/.
+

conda-recepie/copy_gui.sh

@@ -1,15 +1,3 @@
-
-mkdir $PREFIX/lib
+#Copy the GUI 
 mkdir $PREFIX/bin
-mkdir $PREFIX/include
-
-#No libs for gui?
-
-#Binaries
-cp build/bin/gui_client $PREFIX/bin/.
 cp build/bin/slsDetectorGui $PREFIX/bin/.
-
-
-#Which headers do we need for development??
-
-# cp include/some_lib.h $PREFIX/include/.

conda-recepie/copy_lib.sh

@@ -5,18 +5,20 @@ mkdir $PREFIX/include
 mkdir $PREFIX/include/slsDetectorPackage
 
 #Shared and static libraries
-cp build/bin/libSlsDetector.so $PREFIX/lib/.
-cp build/bin/libSlsReceiver.so $PREFIX/lib/.
-cp build/bin/libSlsSupport.so $PREFIX/lib/.
+# cp build/bin/libSlsDetector.so $PREFIX/lib/.
+# cp build/bin/libSlsReceiver.so $PREFIX/lib/.
+# cp build/bin/libSlsSupport.so $PREFIX/lib/.
+
+cp build/install/lib/* $PREFIX/lib/
 
 #Binaries
-cp build/bin/sls_detector_acquire $PREFIX/bin/.
-cp build/bin/sls_detector_get $PREFIX/bin/.
-cp build/bin/sls_detector_put $PREFIX/bin/.
-cp build/bin/sls_detector_help $PREFIX/bin/.
-cp build/bin/slsReceiver $PREFIX/bin/.
-cp build/bin/slsMultiReceiver $PREFIX/bin/.
+cp build/install/bin/sls_detector_acquire $PREFIX/bin/.
+cp build/install/bin/sls_detector_get $PREFIX/bin/.
+cp build/install/bin/sls_detector_put $PREFIX/bin/.
+cp build/install/bin/sls_detector_help $PREFIX/bin/.
+cp build/install/bin/slsReceiver $PREFIX/bin/.
+cp build/install/bin/slsMultiReceiver $PREFIX/bin/.
 
-#Which headers do we need for development??
-cp build/install/include/* $PREFIX/include/slsDetectorPackage/
-# cp include/some_lib.h $PREFIX/include/.
+
+cp build/install/include/* $PREFIX/include/
+cp -r build/install/share/ $PREFIX/share

conda-recepie/meta.yaml

@@ -1,13 +1,14 @@
 
 package:
   name: sls_detector_software
-  version: "developer"
+  version: {{ environ.get('GIT_DESCRIBE_TAG', '') }}
 
 source:
   - path: ..
 
 build:
-  number: 1
+  number: 0
+  binary_relocation: True
   rpaths:
     - lib/
 
@@ -16,10 +17,9 @@ requirements:
     - {{ compiler('c') }}
     - {{compiler('cxx')}}
     - cmake
-    # - qwt 6.* #require qt5 investigate befor activating gui
-    # - qt=4.8.7=7
-    - zeromq=4.2.5=hfc679d8_5
-    - pyzmq
+    - qwt 6.*
+    - qt 4.8.*
+    - zeromq
     - xorg-libx11
     - xorg-libice
     - xorg-libxext
@@ -37,6 +37,7 @@ requirements:
   host:
     - libstdcxx-ng
     - libgcc-ng
+    - zeromq
     - xorg-libx11
     - xorg-libice
     - xorg-libxext
@@ -46,75 +47,52 @@ requirements:
     - xorg-libxfixes
 
   run:
+    - zeromq
     - libstdcxx-ng
     - libgcc-ng 
 
 
 outputs:
-  - name: sls_detector_lib
+  - name: slsdetlib
     script: copy_lib.sh
 
-  - name: sls_detector
+    requirements:
+      run: 
+        - libstdcxx-ng
+        - libgcc-ng
+        - zeromq
+
+  - name: slsdet
+
     script: build_pylib.sh
 
     requirements:
       build:
+        - python
         - {{ compiler('c') }}
         - {{compiler('cxx')}}
-        - python {{ python }}
+        - {{ pin_subpackage('slsdetlib', exact=True) }}
         - setuptools
-        - sls_detector_lib
-        - pyzmq
-        - pybind11 2.4
+
       host:
         - python
-        - pybind11 2.4 
-        - pyzmq
-        - sls_detector_lib
+
+      run:
         - libstdcxx-ng
         - libgcc-ng
-      run:
         - python
         - numpy
-        - sls_detector_lib=developer
-        - pyzmq
-        - libstdcxx-ng
-        - libgcc-ng
+        - {{ pin_subpackage('slsdetlib', exact=True) }}
+
+
     test:
       imports:
-        - sls_detector
+        - slsdet
 
-    # requirements:
-    #   build:
-    #     - {{ compiler('c') }}
-    #     - {{compiler('cxx')}}
-
-  # - name: sls_detector_gui
-  #   version: "refactor"
-  #   script: copy_gui.sh
-  #   requirements:
-  #     build:
-  #     - {{ compiler('c') }}
-  #     - {{compiler('cxx')}}
-  #     - cmake
-  #     - qwt 6.*
-  #     - qt=4.8.7=7
-  #     - zeromq=4.2.5=hfc679d8_5
-  #     - pyzmq
-  #     - xorg-libx11
-  #     - xorg-libice
-  #     - xorg-libxext
-  #     - xorg-libsm
-  #     - xorg-libxau
-  #     - xorg-libxrender
-  #     - xorg-libxfixes
-  #     - {{ cdt('mesa-libgl-devel') }}      # [linux]
-  #     - {{ cdt('mesa-libegl-devel') }}     # [linux]
-  #     - {{ cdt('mesa-dri-drivers') }}      # [linux]
-  #     - {{ cdt('libselinux') }}      # [linux]
-  #     - {{ cdt('libxdamage') }}            # [linux]
-  #     - {{ cdt('libxxf86vm') }}            # [linux]
-  #     run:
-  #       - sls_detector_lib=refactor
-  #       - qwt 6.*
-  #       - qt=4.8.7=7
+  - name: slsdetgui
+    script: copy_gui.sh
+    requirements:
+      run:
+        - {{ pin_subpackage('slsdetlib', exact=True) }}
+        - qwt 6.*
+        - qt 4.8.*

ctbGui/CMakeLists.txt

@@ -71,6 +71,11 @@ target_link_libraries(ctbRootLib PUBLIC
     ${ROOT_EXE_LINKER_FLAGS}
 )
 
+set_target_properties(
+    ctbRootLib PROPERTIES
+    LIBRARY_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/bin
+)
+
 target_link_libraries(ctbGui PUBLIC 
     slsDetectorShared
     slsSupportLib
@@ -80,4 +85,5 @@ target_link_libraries(ctbGui PUBLIC
 
 set_target_properties(ctbGui PROPERTIES
     RUNTIME_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/bin
+
 )

ctbGui/ctbAcquisition.cpp

@@ -29,9 +29,10 @@
 #include "sls_detector_defs.h"
 #include "ctbMain.h"
 #include "moench03CtbData.h" 
-#include "moench03TCtbData.h" 
-#include "moench03T1CtbData.h" 
+//#include "moench03TCtbData.h" 
+//#include "moench03T1CtbData.h" 
 #include "moench03CommonMode.h" 
+#include "moench03T1ZmqDataNew.h" 
 #include "moench02CtbData.h" 
 //#include "jungfrau10ModuleData.h" 
 #include "moenchCommonMode.h" 
@@ -43,6 +44,9 @@
 #include "moench04CtbZmq10GbData.h"
 #include "deserializer.h"
 #include "detectorData.h"
+#include "imageZmq16bit.h"
+#include "imageZmq32bit.h"
+
 
 using namespace std;
 
@@ -232,7 +236,10 @@ hframe=new TGHorizontalFrame(this, 800,50);
   cbDetType->AddEntry("MOENCH02", MOENCH02);
   cbDetType->AddEntry("MOENCH04", MOENCH04);
   // cbDetType->AddEntry("JUNGFRAU1.0", 2);
-  //cbDetType->AddEntry("MOENCH03 T", iiii++);
+  cbDetType->AddEntry("MOENCH03",MOENCH03);
+  cbDetType->AddEntry("IMAGE32BIT",IMAGE32B);
+  cbDetType->AddEntry("IMAGE16BIT",IMAGE16B);
+
   //cbDetType->AddEntry("MOENCH03", iiii++);
   // cbDetType->AddEntry("MYTHEN3 0.1", MYTHEN301);
   // cbDetType->AddEntry("ADCSAR2", ADCSAR2);
@@ -271,7 +278,7 @@ hframe=new TGHorizontalFrame(this, 800,50);
 
 
 
-    cout << "off "<< endl;
+  //  cout << "off "<< endl;
 
 
   hframe=new TGHorizontalFrame(this, 800,50);
@@ -290,8 +297,8 @@ hframe=new TGHorizontalFrame(this, 800,50);
                                                TGNumberFormat::kNEANonNegative, 
 			     TGNumberFormat::kNELLimitMinMax,0,16535);
    hframe->AddFrame(eSerOff,new TGLayoutHints(kLHintsTop |  kLHintsExpandX, 1, 1, 1, 1));
-   eSerOff->MapWindow();;
-   eSerOff->SetNumber(5);
+   eSerOff->MapWindow();
+   eSerOff->SetNumber(0);
    e= eSerOff->TGNumberEntry::GetNumberEntry();
    eSerOff->Connect("ValueSet(Long_t)","ctbAcquisition",this,"ChangeSerialOffset(Long_t)");
    e->Connect("ReturnPressed()","ctbAcquisition",this,"ChangeSerialOffset()");
@@ -337,6 +344,53 @@ hframe=new TGHorizontalFrame(this, 800,50);
    
 
 
+  hframe=new TGHorizontalFrame(this, 800,50);
+  AddFrame(hframe,new TGLayoutHints(kLHintsTop | kLHintsExpandX , 10,10,10,10));
+  hframe->MapWindow();
+    
+ 
+
+  label=new TGLabel(hframe,"Image Pixels");
+  hframe->AddFrame(label,new TGLayoutHints(kLHintsTop | kLHintsLeft| kLHintsExpandX, 5, 5, 5, 5));
+  label->MapWindow();
+  label->SetTextJustify(kTextLeft);
+
+
+  label=new TGLabel(hframe,"X: ");
+  hframe->AddFrame(label,new TGLayoutHints(kLHintsTop | kLHintsLeft| kLHintsExpandX, 5, 5, 5, 5));
+  label->MapWindow();
+  label->SetTextJustify(kTextRight);
+
+
+  ePixX=new TGNumberEntry(hframe, 0, 9,999, TGNumberFormat::kNESInteger,
+                                               TGNumberFormat::kNEANonNegative, 
+			     TGNumberFormat::kNELLimitMinMax,0,16535);
+   hframe->AddFrame(ePixX,new TGLayoutHints(kLHintsTop |  kLHintsExpandX, 1, 1, 1, 1));
+   ePixX->MapWindow();
+   ePixX->SetNumber(400);
+   e= ePixX->TGNumberEntry::GetNumberEntry();
+   ePixX->Connect("ValueSet(Long_t)","ctbAcquisition",this,"ChangeImagePixels(Long_t)");
+   e->Connect("ReturnPressed()","ctbAcquisition",this,"ChangeImagePixels()");
+
+
+
+  label=new TGLabel(hframe,"Y: ");
+  hframe->AddFrame(label,new TGLayoutHints(kLHintsTop | kLHintsLeft| kLHintsExpandX, 5, 5, 5, 5));
+  label->MapWindow();
+  label->SetTextJustify(kTextRight);
+
+
+  ePixY=new TGNumberEntry(hframe, 0, 9,999, TGNumberFormat::kNESInteger,
+                                               TGNumberFormat::kNEANonNegative, 
+			     TGNumberFormat::kNELLimitMinMax,0,16535);
+   hframe->AddFrame(ePixY,new TGLayoutHints(kLHintsTop |  kLHintsExpandX, 1, 1, 1, 1));
+   ePixY->MapWindow();
+   ePixY->SetNumber(400);
+   e= ePixY->TGNumberEntry::GetNumberEntry();
+   ePixY->Connect("ValueSet(Long_t)","ctbAcquisition",this,"ChangeImagePixels(Long_t)");
+   e->Connect("ReturnPressed()","ctbAcquisition",this,"ChangeImagePixels()");
+
+
 
 
   hframe=new TGHorizontalFrame(this, 800,50);
@@ -610,7 +664,9 @@ hframe=new TGHorizontalFrame(this, 800,50);
   try {
     myDet->registerDataCallback(&dataCallback, (void*)this);
   } CATCH_DISPLAY ("Could not get register call back.", "ctbAcquisition::ctbAcquisition") 
-
+      try {
+	myDet->setRxZmqDataStream(true); 
+      } CATCH_DISPLAY ("Could not get set RxZmqDataStream.", "ctbAcquisition::ctbAcquisition") 
   cout <<"Done" << endl;
   
     //  mgAdcs=new TMultiGraph();
@@ -832,7 +888,7 @@ sample1 (dbit0 + dbit1 +...)if (cmd == "rx_dbitlist") {
 
   //  cout <<"global plot is " << globalPlot << endl;
   // cout << "*******************************************" <<endl;
-  // cout <<"------Plot: "<<  index << " prog:" << data->progressIndex << " npoints:" << data->npoints << " npy: " << data->npy << " " << data->fileName << " bytes: " << data->databytes << " dr:"<< data->dynamicRange << " fi: " << data ->fileIndex <<  endl;
+   cout <<"------Plot: "<<  index << " prog:" << data->progressIndex << " nx:" << data->nx << " ny: " << data->ny << " " << data->fileName << " bytes: " << data->databytes << " dr:"<< data->dynamicRange << " fi: " << data ->fileIndex <<  endl;
   if (globalPlot || cbGetPedestal->IsOn()) {
     //#ifdef TESTADC
     //  cout <<"------"<<  index << " " << ip << " " << data->npoints << endl;
@@ -859,6 +915,11 @@ sample1 (dbit0 + dbit1 +...)if (cmd == "rx_dbitlist") {
     nx=eNumCount->GetIntNumber();
     dr=eDynRange->GetIntNumber();
     soff=eSerOff->GetIntNumber();
+    // cout <<"deserializer: " << endl;
+    // cout << "Number of chans:\t" << nx << endl;
+    // cout << "Serial Offset:\t" << soff << endl;
+    // cout << "Dynamic range:\t" << dr << endl;
+    
   }
 
   i=0;
@@ -923,7 +984,8 @@ sample1 (dbit0 + dbit1 +...)if (cmd == "rx_dbitlist") {
       for (int y=0; y<ny; y++) {
 	ped=0;
 	aval=dataStructure->getValue(data->data,x,y);
-      
+	//aval=dataStructure->getChannel(data->data,x,y);
+	cout << x << " " <<y << " "<< aval << endl;
 	if (cbGetPedestal->IsOn()) {
 	  if (photonFinder) {
 	    photonFinder->addToPedestal(aval,x,y);
@@ -1095,7 +1157,19 @@ void ctbAcquisition::changePlot(){
   if (rbPlotOff->IsOn()) {
     adcPlot=0;
     dbitPlot=0;   
+    try {
+      myDet->registerDataCallback(nullptr, this);  
+    } CATCH_DISPLAY ("Could not get unregister call back.", "ctbAcquisition::ctbAcquisition")   
+    try {
+      myDet->setRxZmqDataStream(false); 
+    } CATCH_DISPLAY ("Could not get unset RxZmqDataStream.", "ctbAcquisition::ctbAcquisition") 
   } else {
+  try {
+    myDet->registerDataCallback(&dataCallback, (void*)this);
+  } CATCH_DISPLAY ("Could not get register call back.", "ctbAcquisition::ctbAcquisition")   
+    try {
+      myDet->setRxZmqDataStream(true); 
+    } CATCH_DISPLAY ("Could not get set RxZmqDataStream.", "ctbAcquisition::ctbAcquisition") 
     adcPlot=0;
     dbitPlot=0;
     for (int ii=0; ii<NADCS; ii++)
@@ -1200,6 +1274,9 @@ void ctbAcquisition::changeDetector(){
    eNumCount->SetState(kFALSE);
   eDynRange->SetState(kFALSE);
   eSerOff->SetState(kFALSE);
+  ePixX->SetState(kFALSE);
+  ePixY->SetState(kFALSE);
+    
   deserializer=0;
   if (rb2D->IsOn() ) {//|| rbScan->IsOn()
     switch  (cbDetType->GetSelected()) {
@@ -1210,7 +1287,6 @@ void ctbAcquisition::changeDetector(){
       // commonMode=new moench03CommonMode();
       break;
      case MOENCH04:
-
       try {
         auto retval = myDet->getTenGiga().tsquash("Different values");
         if (retval) {
@@ -1223,6 +1299,54 @@ void ctbAcquisition::changeDetector(){
        cout << "MOENCH 0.4!" << endl;
        commonMode=new moench03CommonMode();
       break;
+     case MOENCH03:
+       //try {
+	// auto retval = myDet->getTenGiga().tsquash("Different values");
+	// if (retval) {
+          dataStructure=new moench03T1ZmqDataNew(nAnalogSamples); 
+        // } else {
+        //   dataStructure=new moench04CtbZmqData(nAnalogSamples, nDigitalSamples); 
+        // }
+	  //} CATCH_DISPLAY ("Could not get ten giga enable.", "ctbAcquisition::changeDetector")
+
+       cout << "MOENCH 0.3! USE JUNGFRAU MODULE!" << endl;
+       commonMode=new moench03CommonMode();
+      break;
+       case IMAGE32B:
+       //try {
+       	// auto retval = myDet->getTenGiga().tsquash("Different values");
+       	// if (retval) {
+       	// if (deserializer) {
+       	   ePixX->SetState(kTRUE);
+       	   ePixY->SetState(kTRUE);
+       	   // }
+       	 dataStructure=new imageZmq32bit(ePixX->GetIntNumber(),ePixY->GetIntNumber()); 
+        // } else {
+        //   dataStructure=new moench04CtbZmqData(nAnalogSamples, nDigitalSamples); 
+        // }
+       	  //} CATCH_DISPLAY ("Could not get ten giga enable.", "ctbAcquisition::changeDetector")
+
+       	 cout << "Image 32bit, no channel shuffling" << endl;
+       commonMode=NULL;
+       break;
+   
+       case IMAGE16B:
+       //try {
+	// auto retval = myDet->getTenGiga().tsquash("Different values");
+	// if (retval) {
+	// if (deserializer) {
+	   ePixX->SetState(kTRUE);
+	   ePixY->SetState(kTRUE);
+	   // }
+	 dataStructure=new imageZmq16bit(ePixX->GetIntNumber(),ePixY->GetIntNumber()); 
+        // } else {
+        //   dataStructure=new moench04CtbZmqData(nAnalogSamples, nDigitalSamples); 
+        // }
+	  //} CATCH_DISPLAY ("Could not get ten giga enable.", "ctbAcquisition::changeDetector")
+
+	 cout << "Image 16bit, no channel shuffling" << endl;
+       commonMode=NULL;
+       break;
    
     // case 1:
     //   cout << "************** T!!!!!!!!!!" << endl;
@@ -1286,6 +1410,7 @@ void ctbAcquisition::changeDetector(){
 	photonFinder=new singlePhotonDetector(dataStructure,csize,nsigma,1,cm); //sign is positive - should correct with ADC mask, no common mode 
 	//photonFinder=new singlePhotonDetector(dataStructure,csize,nsigma,1,cm); //sign is positive - should correct with ADC mask, no common mode
 	dataStructure->getDetectorSize(nx,ny);
+	
       }
       if (deserializer) {
 	ny=1;
@@ -1511,13 +1636,13 @@ void ctbAcquisition::update() {
 
    if (dataStructure) {
      cout << cbDetType->GetSelected()<< endl;
-    if (cbDetType->GetSelected()==MYTHEN301 || cbDetType->GetSelected()==MYTHEN302){
-      cout << "settings deserialiation parameters for MYTHEN" << endl;
-      mythen3_01_jctbData* ms=(mythen3_01_jctbData*)dataStructure;
-      eSerOff->SetNumber( ms->setSerialOffset(-1));
-      eDynRange->SetNumber( ms->setDynamicRange(-1));
-      eNumCount->SetNumber( ms->setNumberOfCounters(-1));
-    }
+    // if (cbDetType->GetSelected()==MYTHEN301 || cbDetType->GetSelected()==MYTHEN302){
+    //   cout << "settings deserialiation parameters for MYTHEN" << endl;
+    //   mythen3_01_jctbData* ms=(mythen3_01_jctbData*)dataStructure;
+    //   eSerOff->SetNumber( ms->setSerialOffset(-1));
+    //   eDynRange->SetNumber( ms->setDynamicRange(-1));
+    //   eNumCount->SetNumber( ms->setNumberOfCounters(-1));
+    // }
     
    }
 
@@ -1977,20 +2102,22 @@ void ctbAcquisition::ChangeNumberOfChannels(Long_t a){
 
 
 void ctbAcquisition::ChangeSerialOffset(){
+  changeDetector();
   // if (dataStructure) {
 
-  //   //  cout << cbDetType->GetSelected()<< endl;
-  //   // if (cbDetType->GetSelected()==MYTHEN301 || cbDetType->GetSelected()==MYTHEN302 ){
-  //   //   cout << "settings offsets for MYTHEN" << endl;
-  //   //   mythen3_01_jctbData* ms=(mythen3_01_jctbData*)dataStructure;
-  //   //   ms->setSerialOffset(eSerOff->GetIntNumber());
+  //    cout << cbDetType->GetSelected()<< endl;
+  //   if (cbDetType->GetSelected()==MYTHEN301 || cbDetType->GetSelected()==MYTHEN302 ){
+  //     cout << "settings offsets for MYTHEN" << endl;
+  //     mythen3_01_jctbData* ms=(mythen3_01_jctbData*)dataStructure;
+  //     ms->setSerialOffset(eSerOff->GetIntNumber());
       
-  //   // }
+  //   }
   // }
 };
 
 
 void ctbAcquisition::ChangeDynamicRange(){
+  changeDetector();
   // if (dataStructure) {
 
   //    cout << cbDetType->GetSelected()<< endl;
@@ -2004,6 +2131,7 @@ void ctbAcquisition::ChangeDynamicRange(){
 };
 
 void ctbAcquisition::ChangeNumberOfChannels(){
+  changeDetector();
   // if (dataStructure) {
   //    cout << cbDetType->GetSelected()<< endl;
   //   if (cbDetType->GetSelected()==MYTHEN301 || cbDetType->GetSelected()==MYTHEN302){
@@ -2017,6 +2145,24 @@ void ctbAcquisition::ChangeNumberOfChannels(){
     changePlot();
 };
 
+void ctbAcquisition::ChangeImagePixels(Long_t a){
+  ChangeImagePixels();
+};
+
+void ctbAcquisition::ChangeImagePixels(){
+  changeDetector();
+  // if (dataStructure) {
+  //    cout << cbDetType->GetSelected()<< endl;
+  //   if (cbDetType->GetSelected()==MYTHEN301 || cbDetType->GetSelected()==MYTHEN302){
+  //     cout << "settings number of channels for MYTHEN" << endl;
+  //     mythen3_01_jctbData* ms=(mythen3_01_jctbData*)dataStructure;
+  //     ms->setNumberOfCounters(eNumCount->GetIntNumber());
+      
+  //   }
+  // }
+  // if (deserializer)
+  //  changePlot();
+};
 
 
 void ctbAcquisition::ChangeHistoLimitsPedSub(Long_t a){

ctbGui/ctbAcquisition.h

@@ -42,7 +42,7 @@ using namespace std;
 class ctbAcquisition : public TGGroupFrame {
 
 
-  enum {DESERIALIZER, MOENCH04, MOENCH02, ADCSAR2, MYTHEN301, MYTHEN302};
+  enum {DESERIALIZER, MOENCH04, MOENCH02, MOENCH03, IMAGE32B, IMAGE16B, ADCSAR2, MYTHEN301, MYTHEN302};
 
 
  private:
@@ -57,6 +57,9 @@ class ctbAcquisition : public TGGroupFrame {
   TGNumberEntry *eNumCount;
 
 
+  TGNumberEntry *ePixX;
+  TGNumberEntry *ePixY;
+
   TGNumberEntry *eFitADC;
   TGNumberEntry *eBitPlot;
   TGNumberEntry *eMinRaw;
@@ -231,7 +234,8 @@ class ctbAcquisition : public TGGroupFrame {
    void ChangeNumberOfChannels(Long_t);
    void ChangeDynamicRange();
    void ChangeDynamicRange(Long_t);
-
+   void ChangeImagePixels();
+   void ChangeImagePixels(Long_t);
 
    void canvasClicked();
    void FitADC();

ctbGui/ctbDacs.cpp

@@ -108,15 +108,26 @@ string ctbDac::getLabel() {
 
 }
 
+int ctbDac::getMoenchDacId() {
+  slsDetectorDefs::dacIndex moenchDacIndices[8] = {slsDetectorDefs::VBP_COLBUF, slsDetectorDefs::VIPRE, slsDetectorDefs::VIN_CM, slsDetectorDefs::VB_SDA, slsDetectorDefs::VCASC_SFP, slsDetectorDefs::VOUT_CM, slsDetectorDefs::VIPRE_CDS, slsDetectorDefs::IBIAS_SFP}; 
+
+  if (id >= 8) {
+    return id;
+  }
+  return static_cast<int>(moenchDacIndices[id]);
+}
 
 void ctbDac::setValue(Long_t a) {setValue();}
 
 void ctbDac::setValue() {
-
   cout << "setting dac! "<< id << " value " << dacsEntry->GetIntNumber() << " units " << dacsUnit->IsOn() << endl;
 
   try {
-    myDet->setDAC(static_cast<slsDetectorDefs::dacIndex>(id), dacsEntry->GetIntNumber(), dacsUnit->IsOn()); 
+    int sid = id;
+    if (myDet->getDetectorType().squash() == slsDetectorDefs::MOENCH) {
+      sid = getMoenchDacId();
+    }
+    myDet->setDAC(static_cast<slsDetectorDefs::dacIndex>(sid), dacsEntry->GetIntNumber(), dacsUnit->IsOn()); 
   } CATCH_DISPLAY ("Could not set dac " + to_string(id) + ".", "ctbDac::setValue")
 
   getValue();
@@ -128,7 +139,11 @@ void ctbDac::setOn(Bool_t b) {
     setValue();
   } else {
     try {
-      myDet->setDAC(static_cast<slsDetectorDefs::dacIndex>(id), -100, false);
+      int sid = id;
+      if (myDet->getDetectorType().squash() == slsDetectorDefs::MOENCH) {
+	sid = getMoenchDacId();
+      }
+      myDet->setDAC(static_cast<slsDetectorDefs::dacIndex>(sid), -100, false);
     } CATCH_DISPLAY ("Could not power off dac " + to_string(id) + ".", "ctbDac::setOn")
   }
   getValue();
@@ -136,7 +151,11 @@ void ctbDac::setOn(Bool_t b) {
 
 int ctbDac::getValue() { 
   try {
-    int val = myDet->getDAC(static_cast<slsDetectorDefs::dacIndex>(id), dacsUnit->IsOn()).tsquash("Different values"); 
+    int sid = id;
+    if (myDet->getDetectorType().squash() == slsDetectorDefs::MOENCH) {
+      sid = getMoenchDacId();
+    }
+    int val = myDet->getDAC(static_cast<slsDetectorDefs::dacIndex>(sid), dacsUnit->IsOn()).tsquash("Different values"); 
     cout << "dac " << id << " " << val << endl;
     dacsValue->SetText(to_string(val).c_str());
     if (val >= 0) {

ctbGui/ctbDacs.h

@@ -45,7 +45,7 @@ class ctbDac : public TGHorizontalFrame {
    
    int setLabel(char *tit, int mv);
    string getLabel();
-
+int getMoenchDacId();
 
 
    ClassDef(ctbDac,0)
@@ -54,8 +54,6 @@ class ctbDac : public TGHorizontalFrame {
 class ctbDacs : public TGGroupFrame {
 private:
   
-
-
    ctbDac *dacs[NDACS+2];
 
    sls::Detector* myDet;

ctbGui/ctbDefs.h

@@ -71,10 +71,10 @@ class ctbDefs {
                     std::string exceptionMessage,
                     std::string source) {
         // because sls_detector_exceptions cannot be included
-        if (exceptionMessage.find("hared memory")) {
+      if (exceptionMessage.find("hared memory") != std::string::npos) {
             throw;
         }
-        if (exceptionMessage.find("annot connect")) {
+      if (exceptionMessage.find("annot connect") != std::string::npos) {
             throw;
         }
         cprintf(RED, "Warning (%s): %s [Caught Exception: %s]\n", source.c_str(), message.c_str(), exceptionMessage.c_str());

ctbGui/ctbMain.cpp

@@ -259,8 +259,10 @@ ctbMain::ctbMain(const TGWindow *p, sls::Detector *det)
 
    cout << "connect mtab" << endl;
 
-   
+  try{  
    setReadoutMode(pat->getReadoutMode());  
+  } CATCH_DISPLAY ("Could not get readout flags", "ctbPattern::getReadoutMode")
+
    setADCEnable(adcs->setEnable());
    setAnalogSamples(pat->getAnalogSamples());
    setDigitalSamples(pat->getDigitalSamples());

ctbGui/ctbPattern.cpp

@@ -1036,8 +1036,13 @@ void ctbPattern::readoutModeChanged(int flags) {
 }
 
 int ctbPattern::getReadoutMode() {  
+ int retval=slsDetectorDefs::ANALOG_ONLY;
+    
+ if (myDet->getDetectorType().squash() == slsDetectorDefs::CHIPTESTBOARD) {
    try{
-    auto retval = myDet->getReadoutMode().tsquash("Different values");
+     retval = myDet->getReadoutMode().tsquash("Different values");
+   } CATCH_DISPLAY ("Could not get readout flags", "ctbPattern::getReadoutMode")
+      
    switch(retval) {
    case slsDetectorDefs::ANALOG_AND_DIGITAL:
      cout << "analog and digital" << endl;
@@ -1057,11 +1062,15 @@ int ctbPattern::getReadoutMode() {
    default:
      throw("unknown readout flag");
    }
+ } else {
+   cbAnalog->SetOn(kTRUE);
+   cbDigital->SetOn(kFALSE);    
+ }
+    
     Emit("readoutModeChanged(int)",static_cast<int>(retval));
     return retval;
-  } CATCH_DISPLAY ("Could not get readout flags", "ctbPattern::getReadoutMode")
  
-  return -1;
+ 
 }
 
 int ctbPattern::getAnalogSamples() {
@@ -1076,12 +1085,16 @@ int ctbPattern::getAnalogSamples() {
 }
    
 int ctbPattern::getDigitalSamples() { 
+  int retval=0;
+  if (myDet->getDetectorType().squash() == slsDetectorDefs::CHIPTESTBOARD) {
     try{
       auto retval = myDet->getNumberOfDigitalSamples().tsquash("Different values"); 
+    } CATCH_DISPLAY ("Could not get number of digital samples.", "ctbPattern::getDigitalSamples")
+	}
   eDigitalSamples->SetNumber((Double_t)retval);
   Emit("digitalSamplesChanged(const int)", eDigitalSamples->GetNumber());
   return eDigitalSamples->GetNumber();
-  } CATCH_DISPLAY ("Could not get number of triggers.", "ctbPattern::update")
+ 
 
   return -1;
 }

docs/CMakeLists.txt

@@ -3,7 +3,7 @@ find_package(Sphinx)
 
 
 if (DOXYGEN_FOUND AND SPHINX_FOUND)
-    message(${CMAKE_PROJECT_SORURCE_DIR}/slsDetectorSoftware/src)
+    # message(${CMAKE_PROJECT_SORURCE_DIR}/slsDetectorSoftware/src)
     # Utility to generate command line documentation
     add_executable(gendoc src/gendoc.cpp)
     # This is a bit hacky, but better than exposing stuff? 
@@ -30,6 +30,7 @@ if (DOXYGEN_FOUND AND SPHINX_FOUND)
     set(SPHINX_SOURCE_FILES
       src/commandline.rst
       src/container_utils.rst
+      src/consuming.rst
       src/dependencies.rst
       src/detector.rst
       src/index.rst
@@ -41,6 +42,7 @@ if (DOXYGEN_FOUND AND SPHINX_FOUND)
       src/result.rst
       src/type_traits.rst
       src/ToString.rst
+      src/examples.rst
       
     )
 

docs/src/consuming.rst

@@ -0,0 +1,95 @@
+Consuming slsDetectorPackage
+===============================
+
+Depending on how you want to build your integration with 
+slsDetectorPackage there are a few different ways to 
+consume our package. The recommended way is to use one of the 
+CMake approaches. 
+
+
+
+CMake: slsDetectorPackage as submodule in your project
+---------------------------------------
+
+If you are using CMake to build your integration and want to build everything
+in one go, we support adding slsDetectorPackage as a subfolder in your cmake project. 
+
+A minimal CMakeLists.txt could look like this: 
+
+.. code-block:: cmake
+
+    project(myDetectorIntegration)
+    cmake_minimum_required(VERSION 3.12)
+    add_subdirectory(slsDetectorPackage)
+
+    #Add your executable
+    add_executable(example main.cpp)
+    target_compile_features(example PRIVATE cxx_std_11)
+
+    #Link towards slsDetectorShared
+    target_link_libraries(example slsDetectorShared)
+
+A fully working example can be found at:
+
+https://github.com/slsdetectorgroup/cmake-subfolder-example
+
+
+CMake: find_package(slsDetectorPackage)
+------------------------------------------
+
+If you have compiled and installed slsDetectorPackage we also support
+find_package in CMake. If installed in a system wide location no path
+should be needed, otherwise specify cmake prefix path. 
+
+.. code-block:: cmake 
+
+    cmake_minimum_required(VERSION 3.12)
+    project(myintegration)
+
+    find_package(slsDetectorPackage 5.0 REQUIRED)
+    add_executable(example main.cpp)
+    target_link_libraries(example slsDetectorShared)
+
+
+Then assuming the slsDetectorPackage is installed in /path/to/sls/install
+you should be able to configure and build your project in this way. 
+
+.. code-block:: bash
+
+    cmake ../path/to/your/source -DCMAKE_PREFIX_PATH=/path/to/sls/install
+    make
+
+
+A minimal example is available at: https://github.com/slsdetectorgroup/minimal-cmake
+
+No tools minimal approach
+-----------------------------
+
+While not recommended it is still possible to specify the include and library paths
+manually when invoking g++. This can sometimes be handy for a quick try. 
+
+.. code-block:: cpp
+
+    #include "Detector.h"
+    #include <iostream>
+    int main(){
+
+        sls::Detector det;
+
+        //Get all values and print them
+        std::cout << "Hostname: " << det.getHostname() << "\n";
+        std::cout << "Type: " << det.getDetectorType() << "\n";
+        std::cout << "Udp ip: " << det.getSourceUDPIP() << "\n";
+
+
+        //Get mac addr 
+        const int module = 0;
+        auto mac = det.getSourceUDPMAC()[module];
+        std::cout << "Mac addr of module "<< module <<  " is " <<  mac.str() << '\n'; 
+
+    }     
+
+
+.. code-block:: bash
+
+    g++ -I/install/path/include/  -L/install/path/lib64/ myapp.cpp -lSlsDetector -lSlsSupport -Wl,-rpath=../install/path/lib64

docs/src/dependencies.rst

@@ -13,7 +13,7 @@ To use the basic building blocks, meaning sls_detector_get/put and
 the shared libraries these are needed: 
 
  * Linux, preferably recent kernel (currently no cross platform support)
- * CMake > 3.9 
+ * CMake > 3.12 
  * C++11 compatible compiler. (We test with gcc and clang)
  * ZeroMQ version 4
 
@@ -24,7 +24,7 @@ GUI
 The GUI is currently using Qt4 but watch out for an upgrade to 5. 
 
  * Qt 4.8
- * Qwt 6
+ * Qwt 6.1
 
 -----------------------
 Python bindings

docs/src/examples.rst

@@ -0,0 +1,115 @@
+
+
+
+Examples
+===========
+
+Setup 
+------------
+
+The examples here assume that you have compiled and installed slsDetectorPackage
+to ~/sls/install and that the option for SLS_USE_SIMULATOR was enabled. This also builds
+the virtual detector servers that we will be using for testing. 
+
+We also add ~/sls/detector/install/bin to the path for convenience. 
+
+Compile examples
+-------------------
+
+The source code of the examples is available at:
+https://github.com/slsdetectorgroup/api-examples
+
+
+.. code-block:: bash
+
+    git clone https://github.com/slsdetectorgroup/api-examples.git
+    mkdir build && cd build
+    cmake ../api-examples -DCMAKE_PREFIX_PATH=~/sls/detector/install
+    make
+
+Below follows a short description of what is included in the examples.
+
+
+Running a config file [e1]
+-----------------------------
+
+
+.. code-block:: cpp
+
+    #include "Detector.h"
+    ...
+    sls::Detector det;
+    det.loadConfig("path/to/config/file.config");
+
+
+
+To configure the connection between PC and detector the easiest 
+is to run a config file. For this example we first launch a virtual Jungfrau server and
+then set up the detector. 
+
+**Launch a virtual detector server**
+
+.. code-block:: bash
+
+    jungfrauDetectorServer_virtual
+
+This launches a virtual Jungfrau detector server. As default is uses port 1952 and 1953
+for communication over TCP. Most commands go on 1952 and only stop and status on 1953. 
+
+**Run example to configure**
+
+.. code-block:: bash
+
+    ./e1-config one_det_no_receiver.config
+    - 12:01:06.371 INFO: Shared memory deleted /slsDetectorPackage_multi_0_sls_0
+    - 12:01:06.371 INFO: Shared memory deleted /slsDetectorPackage_multi_0
+    - 12:01:06.372 INFO: Shared memory created /slsDetectorPackage_multi_0
+    - 12:01:06.376 INFO: Loading configuration file: one_det_no_receiver.config
+    - 12:01:06.376 INFO: Adding detector localhost
+    - 12:01:06.377 INFO: Shared memory created /slsDetectorPackage_multi_0_sls_0
+    - 12:01:06.377 INFO: Checking Detector Version Compatibility
+    - 12:01:06.378 INFO: Detector connecting - updating!
+    hostname [localhost]
+
+
+    Jungfrau detector with 1 modules configured
+
+
+Using the return type sls::Result [e2]
+-----------------------------------------
+
+Since many our detectors have multiple modules we cannot return
+a single value when reading from the Detector. Hostname, Ip and also
+for example exposure time can differ between modules. 
+
+Therefore we return Result<T> which is a thin wrapper around
+std::vector. 
+
+.. code-block:: cpp
+
+    sls::Result<int> res1{1, 1, 1};
+    std::cout << "res1: " << res1 << '\n';
+    res1.squash();
+    res1.squash(-1);
+
+
+
+Setting exposure time [e3]
+-----------------------------------------
+
+For setting times, like exposure time, period, delay etc. 
+we use std::chrono::duration. 
+
+Example 3 shows how to set and read exposure time as well
+as converting to floating point. 
+
+.. code-block:: cpp
+
+    #include "Detector.h"
+    #include <chrono>
+    ...
+    std::chrono::microseconds t0{500};
+    det.setExptime(t0);
+
+
+

docs/src/index.rst

@@ -6,12 +6,18 @@
 Welcome to slsDetectorPackage's documentation!
 ==============================================
 
+.. note :: 
+
+    This is the documentation for the latest development version of slsDetectorPackage
+    For documentation on current and previous releases visit the official page: https://www.psi.ch/en/detectors/documentation
+
 .. toctree::
     :maxdepth: 1
     :caption: Installation:
 
     installation
     dependencies
+    consuming
    
 .. toctree::
     :caption: C++ API
@@ -20,6 +26,7 @@ Welcome to slsDetectorPackage's documentation!
     detector
     result
     receiver
+    examples
 
 .. toctree::
     :caption: Python API

docs/src/installation.rst

@@ -2,4 +2,24 @@
 Installation
 ==============================================
 
-get the source etc.
+Build from source using CMake
+---------------------------------
+
+.. note :: 
+
+    The default branch of our git repository is developer. It contains the 
+    latest development version. It is expected to compile and work but 
+    features might be added or tweaked. In some cases the API might also change
+    without being communicated. If absolute stability of the API is needed please
+    use one of the release versions. 
+
+.. code-block:: bash
+
+    git clone https://github.com/slsdetectorgroup/slsDetectorPackage.git
+    mkdir build && cd build
+    cmake ../slsDetectorPackage -DCMAKE_INSTALL_PREFIX=/your/install/path
+    make -j12
+    make install
+
+    
+

docs/src/pydetector.rst

@@ -1,9 +1,9 @@
 Detector
 =====================================================
 
-.. py:currentmodule:: sls_detector
+.. py:currentmodule:: slsdet
 
-.. autoclass:: ExperimentalDetector
+.. autoclass:: Detector
     :members:  
     :undoc-members:
     :show-inheritance:

docs/src/pyexamples.rst

@@ -12,7 +12,7 @@ file writing etc.
 
 .. code-block:: python
  
-    from sls_detector import Eiger
+    from slsdet import Eiger
 
     d = Eiger()
     threshold = range(0, 2000, 200)

examples/jctb_moench03_T1.config

@@ -1,4 +1,14 @@
-hostname bchip085+
+initialchecks 0
+#############################################
+### edit with hostname or IP address of your detector 
+############################################
+hostname bchip181+
+runclk 40
+adcclk 20
+dbitclk 40
+
+
+
 
 patword 0000 0000000000000000
 patword 0001 0000000000000000
@@ -408,84 +418,84 @@ patnloop1 0
 patloop2 0400 0400
 patnloop2 0
 patwait0 00aa
-patwaittime0 40000
+patwaittime0 10000
 patwait1 0400
 patwaittime1 0
 patwait2 0400
 patwaittime2 0
 
 
-####mcp2011
-#0:rx_udpip 10.1.1.102
-#0:detectorip 10.1.1.19
-#0:rx_udpport 32410
-####gui listening to 
-#zmqip 129.129.202.131
-#zmqport 30001
-####data streaming out of
-#rx_zmqip 10.1.2.103
-#rx_zmqport 30003
-#0:rx_hostname mpc2011
+#0:rx_tcpport 1977
 
-####mx-test-1
-0:rx_udpip 10.1.1.100
-0:detectorip 10.1.1.19
-0:rx_udpport 32410
-####gui listening to (on receiver pc)
-zmqip 129.129.202.92
-zmqport 30001
-####data streaming out of
-rx_zmqip 10.1.1.100
-rx_zmqport 30003
-0:rx_hostname pcmoench01
+#############################################
+### edit with 10 Gbs IP of your server
+############################################
+#0:udp_dstip 10.1.1.102
+0:udp_dstip 129.129.202.136
+#############################################
+### edit with any number in the subnet of your server (first 3 numbers as above)
+############################################
+#0:udp_srcip 10.1.1.19
+0:udp_srcip 129.129.202.13
+
+0:udp_dstport 33410
+#############################################
+### edit with 10 Gbs IP of your server
+############################################
+#zmqip 129.129.202.110
+#rx_zmqip 10.1.1.102
+#rx_zmqport 30001
+#############################################
+### edit with 1 Gbs IP of PC where you will run the GUI
+############################################
+#zmqip 129.129.202.110
+#zmqport 50001
 
 
+#############################################
+### edit with hostname or 1Gbs IP address of your server
+############################################
+rx_hostname mpc2011
 
+tengiga 0
 
-
-
-
-
-
-
-
-#turn on datastream from commandline
 rx_datastream 1
-
-r_readfreq 1
-
-#0:configuremac -1
-rx_datastream 1
-
-r_readfreq 1
+rx_readfreq 1
 
 
-dac:6 800
-dac:0 1300
-dac:4 1428
-dac:1 1000
-dac:7 900
-dac:3 680
-dac:2 1400
-dac:5 1200
+dac 6 800
+dac 0 1300
+dac 4 1428
+dac 1 1000
+dac 7 900
+dac 3 680
+dac 2 1400
+dac 5 1200
 adcinvert 4a342593
-samples 5000
-adcphase 90
-adcpipeline 15
+#0xb5cbda6c
+asamples 5000
+dsamples 0
+adcphase 30 deg
+adcpipeline 14
 adcreg 14 40
-powerchip 1
+
+
+frames 1000
+period 0.001
+#############################################
+### edit with directory you want to write to
+############################################
+fpath /tmp/
+fwrite 0
+
+romode analog
+#rx_jsonaddheader frameMode
+rx_jsonpara frameMode newpedestal
+#rx_jsonaddheader detectorMode
+rx_jsonpara detectorMode analog
+#flags newpedestal
+#flags analog
+
+reg 0x5e 0x00010000
+#powerchip 1
 vhighvoltage 90
-period 0.005
-
-
-
-
-
-
-frames 100
-period 0.1
-outdir /scratch/
-enablefwrite 0
-
-
-

examples/moench03_T1.config

@@ -0,0 +1,61 @@
+#initialchecks 0
+#############################################
+### edit with hostname or IP address of your detector 
+############################################
+hostname bchip181+
+
+
+
+#############################################
+### edit with 10 Gbs IP of your server
+############################################
+udp_dstip 10.1.1.102
+#############################################
+### edit with any number in the subnet of your server (first 3 numbers as above)
+############################################
+udp_srcip 10.1.1.19
+udp_dstport 33410
+
+#############################################
+### edit with 10 Gbs IP of your server
+############################################
+#rx_zmqip 10.1.1.102
+#rx_zmqport 30001
+#############################################
+### edit with 1 Gbs IP of PC where you will run the GUI
+############################################
+#zmqip 129.129.202.136
+#zmqport 40001
+
+
+#############################################
+### edit with hostname or 1Gbs IP address of your server
+############################################
+rx_hostname mpc2011
+
+
+tengiga 1
+rx_datastream 1
+
+
+
+frames 1
+period 0.001
+#############################################
+### edit with directory you want to write to
+############################################
+fpath /mnt/moench_data/scratch/
+fwrite 0
+rx_datastream 1
+
+rx_jsonpara frameMode newpedestal
+rx_jsonpara detectorMode analog
+rx_discardpolicy discardpartial
+
+
+adcpipeline 15
+
+powerchip 1
+vhighvoltage 90
+
+adcreg 14 40

integrationTests/test-eigerIntegration.cpp

@@ -1,12 +1,12 @@
 #include "catch.hpp"
-#include "multiSlsDetector.h"
+#include "DetectorImpl.h"
 #include "string_utils.h"
 #include "tests/globals.h"
 #include <iostream>
 
 class MultiDetectorFixture {
   protected:
-    multiSlsDetector d;
+    DetectorImpl d;
 
   public:
     MultiDetectorFixture() : d(0, true, true) {

integrationTests/test-integrationDectector.cpp

@@ -3,8 +3,8 @@
 
 #include "ClientSocket.h"
 #include "logger.h"
-#include "multiSlsDetector.h"
-#include "slsDetector.h"
+#include "DetectorImpl.h"
+#include "Module.h"
 #include "sls_detector_defs.h"
 
 #include "Timer.h"
@@ -23,10 +23,10 @@
 // extern dt type;
 
 TEST_CASE("Single detector no receiver", "[.integration][.single]") {
-    auto t = slsDetector::getTypeFromDetector(test::hostname);
+    auto t = Module::getTypeFromDetector(test::hostname);
     CHECK(t == test::type);
 
-    slsDetector d(t);
+    Module d(t);
     CHECK(d.getDetectorTypeAsEnum() == t);
     CHECK(d.getDetectorTypeAsString() == test::detector_type);
 
@@ -51,7 +51,7 @@ TEST_CASE("Set control port then create a new object with this control port",
     int new_cport = 1993;
     int new_sport = 2000;
     {
-        slsDetector d(test::type);
+        Module d(test::type);
         d.setHostname(test::hostname);
         CHECK(d.getControlPort() == old_cport);
         d.setControlPort(new_cport);
@@ -60,7 +60,7 @@ TEST_CASE("Set control port then create a new object with this control port",
         d.freeSharedMemory();
     }
     {
-        slsDetector d(test::type);
+        Module d(test::type);
         d.setHostname(test::hostname);
         d.setControlPort(new_cport);
         d.setStopPort(new_sport);
@@ -73,7 +73,7 @@ TEST_CASE("Set control port then create a new object with this control port",
         d.freeSharedMemory();
     }
 
-    slsDetector d(test::type);
+    Module d(test::type);
     d.setHostname(test::hostname);
     CHECK(d.getStopPort() == DEFAULT_PORTNO + 1);
     d.freeSharedMemory();
@@ -86,11 +86,11 @@ TEST_CASE("single EIGER detector no receiver basic set and get",
     SingleDetectorConfig c;
 
     // Read type by connecting to the detector
-    auto type = slsDetector::getTypeFromDetector(c.hostname);
+    auto type = Module::getTypeFromDetector(c.hostname);
     CHECK(type == c.type_enum);
 
-    // Create slsDetector of said type and set hostname and detector online
-    slsDetector d(type);
+    // Create Module of said type and set hostname and detector online
+    Module d(type);
     CHECK(d.getDetectorTypeAsEnum() == type);
     CHECK(d.getDetectorTypeAsString() == c.type_string);
 
@@ -133,7 +133,7 @@ TEST_CASE("single EIGER detector no receiver basic set and get",
 
 
 TEST_CASE("Locking mechanism and last ip", "[.integration][.single]") {
-    slsDetector d(test::type);
+    Module d(test::type);
     d.setHostname(test::hostname);
 
     // Check that detector server is unlocked then lock
@@ -155,7 +155,7 @@ TEST_CASE("Locking mechanism and last ip", "[.integration][.single]") {
 }
 
 TEST_CASE("Set settings", "[.integration][.single]"){
-    slsDetector d(test::type);
+    Module d(test::type);
     d.setHostname(test::hostname);
     CHECK(d.setSettings(defs::STANDARD) == defs::STANDARD);
 }
@@ -185,7 +185,7 @@ TEST_CASE("Timer functions", "[.integration][cli]") {
     // MEASURED_SUBPERIOD,	/**< measured subperiod */
     // MAX_TIMERS
 
-    slsDetector d(test::type);
+    Module d(test::type);
     d.setHostname(test::hostname);
 
     // Number of frames
@@ -226,8 +226,8 @@ TEST_CASE("Timer functions", "[.integration][cli]") {
 
 // TEST_CASE("Aquire", "[.integration][eiger]"){
 //     SingleDetectorConfig c;
-//     auto type = slsDetector::getTypeFromDetector(c.hostname);
-//     slsDetector d(type);
+//     auto type = Module::getTypeFromDetector(c.hostname);
+//     Module d(type);
 //     d.setHostname(c.hostname);
 
 //     auto period = 1000000000;
@@ -252,7 +252,7 @@ TEST_CASE(
     int ratecorr = 125;
 
     // pick up multi detector from shm id 0
-    multiSlsDetector m(0);
+    DetectorImpl m(0);
 
     // ensure eiger detector type, hostname and online
     REQUIRE(m.getDetectorTypeAsEnum() == c.type_enum);
@@ -302,7 +302,7 @@ TEST_CASE("Chiptestboard Loading Patterns", "[.ctbintegration]") {
     SingleDetectorConfig c;
 
     // pick up multi detector from shm id 0
-    multiSlsDetector m(0);
+    DetectorImpl m(0);
 
     // ensure ctb detector type, hostname and online
     REQUIRE(m.getDetectorTypeAsEnum() == c.type_enum);
@@ -387,7 +387,7 @@ TEST_CASE("Chiptestboard Dbit offset, list, sampling, advinvert", "[.ctbintegrat
     SingleDetectorConfig c;
 
     // pick up multi detector from shm id 0
-    multiSlsDetector m(0);
+    DetectorImpl m(0);
 
     // ensure ctb detector type, hostname and online
     REQUIRE(m.getDetectorTypeAsEnum() == c.type_enum);
@@ -457,7 +457,7 @@ TEST_CASE("Eiger or Jungfrau startingfnum", "[.eigerintegration][.jungfrauintegr
     SingleDetectorConfig c;
 
     // pick up multi detector from shm id 0
-    multiSlsDetector m(0);
+    DetectorImpl m(0);
 
     // ensure ctb detector type, hostname and online
     REQUIRE(((m.getDetectorTypeAsEnum() == slsDetectorDefs::detectorType::EIGER) || (m.getDetectorTypeAsEnum() == slsDetectorDefs::detectorType::JUNGFRAU)));
@@ -495,7 +495,7 @@ TEST_CASE("Eiger readnlines", "[.eigerintegration][readnlines]") {
     SingleDetectorConfig c;
 
     // pick up multi detector from shm id 0
-    multiSlsDetector m(0);
+    DetectorImpl m(0);
 
     // ensure detector type, hostname
     REQUIRE((m.getDetectorTypeAsEnum() == slsDetectorDefs::detectorType::EIGER));

integrationTests/test-integrationMulti.cpp

@@ -1,5 +1,5 @@
 #include "catch.hpp"
-#include "multiSlsDetector.h"
+#include "DetectorImpl.h"
 #include "string_utils.h"
 #include "tests/globals.h"
 #include <iostream>
@@ -9,7 +9,7 @@ using namespace Catch::literals;
 TEST_CASE("Initialize a multi detector", "[.integration][.multi]") {
     auto hostnames = sls::split(test::hostname, '+');
 
-    multiSlsDetector d(0, true, true);
+    DetectorImpl d(0, true, true);
     d.setHostname(test::hostname.c_str());
 
     CHECK(d.getHostname() == test::hostname);
@@ -28,7 +28,7 @@ TEST_CASE("Initialize a multi detector", "[.integration][.multi]") {
 
 TEST_CASE("Set and read timers", "[.integration][.multi]") {
 
-    multiSlsDetector d(0, true, true);
+    DetectorImpl d(0, true, true);
     d.setHostname(test::hostname.c_str());
 
     // FRAME_NUMBER

manual/manual-client/Eiger_short.tex

@@ -176,6 +176,7 @@ One can configure all the detector settings in a parameter file {\tt{setup.det}}
 \begin{verbatim}
 sls_detector_put 0-parameters setup.det
 \end{verbatim}
+Note that the parameter file for any realease before 4.1.1 has not the possibility to understand parameters to be set differently for different half modules, i.e.  {\tt{0:txndelay\_left xxxxx},\tt{1:txndelay\_left yyyyy}}. 
 
 In the case of \E, the proper bias voltage of the sensor has to be setup, i.e. the {\tt{setup.det}} file needs to contain the line {\tt{vhighvoltage 150}}. Other detector functionality, which are rarely changed can be setup here. 
 Other important settings that are configured in the {\tt{setup.det}} file are:
@@ -609,18 +610,19 @@ The detector can be setup such to receive external triggers. Connect a LEMO sign
 \begin{verbatim}
 sls_detector_put 0-timing [auto/trigger/burst_trigger/gating]
 sls_detector_put 0-frames x
-sls_detector_put 0-triggers y
+sls_detector_put 0-cycles y
 sls_detector_acquire 0-
 \end{verbatim}
 No timeout is expected between the start of the acquisition and the arrival of the first trigger. 
 
 Here are the implemented options so far:
 \begin{itemize}
-\item {\tt{auto}} is the software controlled acquisition (does not use triggers), where {\tt{exptime}} and {\tt{period}} have to be set. Set number of triggers (i.e. triggers) to 1 using {\tt{triggers}}. Set number of frames using {\tt{frames}}.
-\item {\tt{trigger}} 1 frame taken for 1 trigger. Your {\tt{frames}} needs to be  1 always, {\tt{triggers}} can be changed and defines how many triggers are considered.  {\tt{exptime}} needs to be set. In the GUI this is called trigger exposure series.  
-\item {\tt{burst\_trigger}} gets only 1 trigger, but allows to take many frames. With {\tt{frames}} one can change the number of frames. {\tt{triggers}} needs to be 1.  {\tt{exptime}} and {\tt{period}} have to be set. In the gui it is called trigger readout.
-\item{\tt{gating}} allows to get a frame only when the trigger pulse is gating. Note that in this case the exp time and period only depend on the gating signal. {\tt{triggers}} allows to select how many gates to consider.  Set number of frames to 1 using {\tt{frames}}. IMPORTANT: Up to firmware 23, the last subframe is oblige to finish being taken, despite the gate signal going down. This will be configurable from later fw and software version. Also, in gating mode, due to timimg of the state machine, you need to leave 500~$\mu$s deadtime between the end on an acquisition and the next. This is as the state machine is unable to check for changes in the status in the first 500~$\mu$s. ATTENTION: if you are in 16 bit mode and you are applying online rate corrections, as now the exptime is generated by the trigger, you might not have correct rate corrections. If you know what the exposure time is in the gating signal, then you can set the {\tt{exptime}} once and the rate corrections will be correct. In 32 bit mode, it does not matter as the rate corrections depends on the {\tt{subexptime}} which is software set independently from the gate exptime.
+\item {\tt{auto}} is the software controlled acquisition (does not use triggers), where {\tt{exptime}} and {\tt{period}} have to be set. Set number of cycles (i.e. triggers) to 1 using {\tt{cycles}}. Set number of frames using {\tt{frames}}.
+\item {\tt{trigger}} 1 frame taken for 1 trigger. Your {\tt{frames}} needs to be  1 always, {\tt{cycles}} can be changed and defines how many triggers are considered.  {\tt{exptime}} needs to be set. In the GUI this is called trigger exposure series.  
+\item {\tt{burst\_trigger}} gets only 1 trigger, but allows to take many frames. With {\tt{frames}} one can change the number of frames. {\tt{cycles}} needs to be 1.  {\tt{exptime}} and {\tt{period}} have to be set. In the gui it is called trigger readout.
+\item{\tt{gating}} allows to get a frame only when the trigger pulse is gating. Note that in this case the exp time and period only depend on the gating signal. {\tt{cycles}} allows to select how many gates to consider.  Set number of frames to 1 using {\tt{frames}}. IMPORTANT: Up to firmware 23, the last subframe is oblige to finish being taken, despite the gate signal going down. This will be configurable from later fw and software version. Also, in gating mode, due to timimg of the state machine, you need to leave 500~$\mu$s deadtime between the end on an acquisition and the next. This is as the state machine is unable to check for changes in the status in the first 500~$\mu$s. ATTENTION: if you are in 16 bit mode and you are applying online rate corrections, as now the exptime is generated by the trigger, you might not have correct rate corrections. If you know what the exposure time is in the gating signal, then you can set the {\tt{exptime}} once and the rate corrections will be correct. In 32 bit mode, it does not matter as the rate corrections depends on the {\tt{subexptime}} which is software set independently from the gate exptime.
 
+ATTENTION: From release 4.1.1 with the {\tt{trigger}} option it is possible to have software triggers as a debugging tool (instead of the hardware trigger signal. One should start the acquisition (with the blocking {\tt{sls\_detector\_acquire}} if wanted and with another client one can send the softare trigger {\tt{sls\_detector\_put status trigger}}. This option allows for example to perform a motor scan (moving a motor in between single images) and still writing all images to the same file. 
 When using 32-bit mode, by default the acquisition ends the last complete subframe that was started when still the acquisition time was valid. This has been chosen as many people wants to know the exact acquisition time for when the detector was taking data and also, if {\tt{ratecorr}} are active, the last subframe will be correctly corrected, while otherwise it will be corrected with a wrong subdeadtime. 
 However, from 4.1.0, in gating mode, an option to immediately terminate the subframe when the gate signal goes down it is implemented to stop the acquisition at the same time.  This option is {\tt{./sls\_detector\_put interruptsubframe 1}} while the default option is {\tt{./sls\_detector\_put interruptsubframe 0}}.  
 
@@ -628,13 +630,13 @@ However, from 4.1.0, in gating mode, an option to immediately terminate the subf
 
 Hardware-wise, the ENABLE OUT signal outputs when the chips are really acquiring. This means that the single subframes will be output in 32 bit mode. The TRIGGER OUT outputs the sum-up-signal at the moment (which is useless). This will be changed in the future to output the envelop of the enable signal. 
 
-We are planning to change some functionality, i.e. unify the {\tt{trigger}} and {\tt{burst\_trigger}} trigger modes and make both {\tt{frames}} and {\tt{triggers}} configurable at the same time.
+We are planning to change some functionality, i.e. unify the {\tt{trigger}} and {\tt{burst\_trigger}} trigger modes and make both {\tt{frames}} and {\tt{cycles}} configurable at the same time.
 
 There is the possibility to use {\tt{timing trigger/burst\_trigger}} and send software single commands to fake the trigger. This is done with:
 \begin{verbatim}
 sls_detector_put 0-timing [trigger/burst_trigger]
 sls_detector_put 0-frames x
-sls_detector_put 0-triggers y
+sls_detector_put 0-cycles y
 sls_detector_status trigger
 \end{verbatim}
  Note that this functionality is very (!) useful if you need to do something between and acquisition and the next. This can be used to do a fast threshold scan for example. See section~\ref{sec:fastthresholdscan}.
@@ -715,7 +717,7 @@ If \textbf{dr} is 32 and \textbf{clkdivider} is not 2, whatever the detector get
 Here is a list of parameters that should be reset:
 \begin{enumerate}
 \item  \textbf{resetframescaught} should be reset to zero after every acquisition taken with {\tt{receiver start}},{\tt{status start}},{\tt{receiver stop}}. If the acquisition is taken with {\tt{sls\_detector\_acquire}}, there is no need to reset this.
-\item After changing the {\tt{timing}} mode of the detector, one should reset to '1' the unused value, in that specific timing mode, between \textbf{frames} and \textbf{triggers}. See section~\ref{triggering} for how to use the timing. At the present moment the detector will acquire more frames than planned if the variable not used between \textbf{frames} and \textbf{triggers} is not reset. In future releases, the unused variable will be ignored. Still resetting is a good practice.
+\item After changing the {\tt{timing}} mode of the detector, one should reset to '1' the unused value, in that specific timing mode, between \textbf{frames} and \textbf{cycles}. See section~\ref{triggering} for how to use the timing. At the present moment the detector will acquire more frames than planned if the variable not used between \textbf{frames} and \textbf{cycles} is not reset. In future releases, the unused variable will be ignored. Still resetting is a good practice.
       
 \end{enumerate}
 
@@ -988,13 +990,14 @@ Packets Caught Mask        : 64 bytes
 Note that if one wants to  reconstruct the real time the detector was acquiring in 32 bit (autosumming mode), one would have to multiply the SubExptime (ns) for the SubFrame Number. 
 
 \subsection{Offline image reconstruction}
-The offline image reconstruction{\tt{slsImageReconstruction}} is not part of the package anymore. The code is still available doing \\
-{\tt{git clone git@git.psi.ch:sls\_detectors\_software/sls\_image\_reconstruction.git slsImageReconstruction}}.
-Checkout the {\tt{developer}} branch if in a 3.1.X release, the {\tt{v4.0.0}} branch if in 4.0.X release, or the {\tt{v4.1}} branch if in 4.1.X release of the {\tt{slsDetector}} code.
+The offline image reconstruction{\tt{slsImageReconstruction}} is not part of the package anymore. However, it can be retrieved from \\
+{\tt{git clone https://github.com/slsdetectorgroup/slsImageReconstruction.git slsImageReconstruction}}.\\
+Checkout the {\tt{v3.1}} branch if in a 3.1.X release, the {\tt{v4.0.0}} branch if in 4.0.X release, or the {\tt{v4.1}} branch if in 4.1.X release of the {\tt{slsDetector}} code. There is a {\tt{developer}} branch that has newer updates but needs to be tested.
 
-Three possible conversions are possible: into \textbf{cbf}, \textbf{hdf5} and \textbf{root} format. The detector writes 4 raw files per receiver. An offline image reconstruction executable has been written to collate the possible files together and produce output files. By default an interpolation between the values of the large pixels is performed. Gap pixels between modules are also inserted.
+Three possible conversions are possible: into \textbf{cbf}, \textbf{hdf5}. \textbf{tiff} and  \textbf{root} format. The detector writes 2 raw files per receiver. An offline image reconstruction executable has been written to collate the possible files together and produce output files. By default an interpolation between the values of the large pixels is performed. Gap pixels between modules are also inserted.
 
-Note that the number of images per file in the 3.1.X release is hardcoded and needs to match whatever you are using in {\tt{slsDetectorsPackage/slsReceiverSoftware/include/sls\_receiver\_defs.h}}:
+Note that the number of images per file in the 3.1.X release is hardcoded and needs to match whatever you are using in \\
+{\tt{slsDetectorsPackage/slsReceiverSoftware/include/sls\_receiver\_defs.h}}:
 \begin{verbatim}
 #define EIGER_MAX_FRAMES_PER_FILE	2000
 \end{verbatim}
@@ -1043,11 +1046,12 @@ cbfMaker9M [file_name_with_dir]
 contain the hardcoded geometry for the 1.5M (3 modules horizontal on the long side), the 1.5M OMNY geometry (3 modules next to each other on the long side) and for the 9M at cSAXS: 6(short side)$\times$3 (long side) modules.\\ 
 Missing packets in a frame and border pixels ($\times 2$ and $\times 4$ are given with value $-1$ at the present time.
 
+From the new {{v4.1.1}} all the define that you see below need only to be modified in the Makefile.
+
 Make sure the following options are uncommented in the {\tt{slsImageReconstruction/src/main\_csaxs.cpp}} file. 
 \begin{verbatim}
 #define MYCBF
-##following line only if you need to process with 
-##BUBBLE (Material Science / uXAS beamlines).
+##following line only if you need to process with BUBBLE
 #define MSHeader 
 \end{verbatim}
 Compile it with: 
@@ -1096,6 +1100,10 @@ To use it any geometry:\\
 eg.
 {\tt image /scratch/run\_63\_d0\_f000000000000\_3.raw  3072 512 1 2 ``Eiger'' 0}.\\
 
+With new new software, the new options to run the cbfMaker/hdf5Maker executablesare: 
+
+./hdf5Maker -f [filename] -d [outdirname] -x [npix\_x] -y [npix\_y] -v  (v flags that longedge is vertical, no argument) -n [name\_of\_hdf5\_dataset] -m (mask\_hot\_pixels, need to be in file maskpix.txt in the samedir as executable, no argument) -g [0,no filling/1,division/2,interpolation/3,interpolate,alternative]  
+
 \subsection{Read temperatures/HV from boards}
 
 With an updated kernel on the linux boards (ask to the SLS detector group for specifications), it is possible to monitor the temperature on the boards: 
@@ -1257,7 +1265,7 @@ We have also been requested if we could speed up the threshold scan. At the mome
 ./sls_detector_put enablefwrite 0
 ./sls_detector_put resetframescaught 0 
 ./sls_detector_put index 0
-./sls_detector_put triggers 21
+./sls_detector_put cycles 21
 ./sls_detector_put receiver start
 ./sls_detector_put status start 
 for i in $(seq 0 20); 
@@ -1515,8 +1523,8 @@ frames number
 where {\tt{number}} is a string to be interpreted as an integer.
 
 \item \begin{verbatim}
-sls_detector_get triggers
-triggers number 
+sls_detector_get cycles
+cycles number 
 \end{verbatim}
 where {\tt{number}} is a string to be interpreted as an integer.
 

python/CMakeLists.txt

@@ -1,20 +1,22 @@
 
-pybind11_add_module(_sls_detector 
+# find_package (Python COMPONENTS Interpreter Development)
+
+pybind11_add_module(_slsdet 
     src/main.cpp 
     src/enums.cpp
     src/detector.cpp
     src/network.cpp
 )
 
-target_link_libraries(_sls_detector PUBLIC 
+target_link_libraries(_slsdet PUBLIC 
                         slsDetectorShared
                         slsReceiverShared
                         slsSupportLib
-                        zmq )  
+                        )  
 
 
 
-set_target_properties(_sls_detector PROPERTIES
+set_target_properties(_slsdet PROPERTIES
                         LIBRARY_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/bin
                     )
 
@@ -32,13 +34,14 @@ set( PYTHON_FILES
     jungfrau.py
     mythen3.py
     registers.py
+    lookup.py
     utils.py
 
 )
 
 foreach(FILE ${PYTHON_FILES})
-    configure_file( sls_detector/${FILE}  
-    ${CMAKE_BINARY_DIR}/bin/sls_detector/${FILE}  )
+    configure_file( slsdet/${FILE}  
+    ${CMAKE_BINARY_DIR}/bin/slsdet/${FILE}  )
 
 endforeach(FILE ${PYTHON_FILES})
 

python/scripts/basic.py

@@ -3,13 +3,13 @@ import sys
 import numpy as np
 sys.path.append(os.path.join(os.getcwd(), 'bin'))
 
-from sls_detector import Detector, Mythen3, Eiger, Jungfrau, DetectorDacs, Dac, Ctb
-from sls_detector import dacIndex
-
+from slsdet import Detector, Mythen3, Eiger, Jungfrau, DetectorDacs, Dac, Ctb
+from slsdet import dacIndex, readoutMode
+from slsdet.lookup import view, find
 
 d = Detector()
 # e = Eiger()
-# c = Ctb()
+c = Ctb()
 # j = Jungfrau()
-m = Mythen3()
+# m = Mythen3()
 

python/scripts/cmd_python.py

@@ -4,13 +4,14 @@ out = subprocess.run(['g', 'list'], stdout = subprocess.PIPE, encoding=locale.ge
 cmd = out.stdout.splitlines()
 cmd.pop(0)
 
-from sls_detector import Detector, Eiger, Ctb
+from slsdet import Detector, Eiger, Ctb
 
 pycmd = dir(Detector)+dir(Eiger)+dir(Ctb)
 
+#Add commands that we should not expect as direct commands in python
 pycmd += ['vrf', 'vtr', 'vrs', 'vtgstv', 'vsvn', 'vtrim',
 'vsvp', 'vth1', 'vth2', 'vth3', 'vshaper', 'vshaperneg', 'rxb_rb',
-'rxb_lb', 'vref_prech', 'vref_restore', 'vref_cds',
+'rxb_lb', 'vref_prech', 'vref_rstore', 'vref_cds',
 'vpreamp', 'vref_comp', 'vref_comp_fe vref_ds', 'vref_h_adc', 
 'vref_l_adc', 'iodelay', 'list', 'vref_ds', 'vis', 'vpl', 
 'vref_comp_fe', 'vph', 'vout_cm', 'vcp', 'vcn', 'vcmp_ll', 'vcmp_lr'

python/scripts/generate_enums.py

@@ -9,19 +9,7 @@ enums.cpp
 import re
 import subprocess
 
-
-# def remove_comments(text):
-#     def replacer(match):
-#         s = match.group(0)
-#         if s.startswith('/'):
-#             return " " # note: a space and not an empty string
-#         else:
-#             return s
-#     pattern = re.compile(
-#         r'//.*?$|/\*.*?\*/|\'(?:\\.|[^\\\'])*\'|"(?:\\.|[^\\"])*"',
-#         re.DOTALL | re.MULTILINE
-#     )
-#     return re.sub(pattern, replacer, text)
+from parse import remove_comments
 
 def extract_enums(lines):
     line_iter = iter(lines)

python/scripts/list_tested_cmd.py

@@ -1,11 +1,19 @@
+"""
+Utility to find and list which command line functions have tests and
+where the tests are located
+"""
+#local import for for parsing c++
 import parse
-from pathlib import Path
+
+#General python stuff
 import os
 import locale
 import argparse
-path  = Path('../../slsDetectorSoftware/tests/')
 import subprocess
+from pathlib import Path
 
+#Realative path from this dir
+path  = Path('../../slsDetectorSoftware/tests/')
 parser = argparse.ArgumentParser()
 parser.add_argument("-s", "--startswith", help="for filter", type = str, default=None)
 args = parser.parse_args()
@@ -15,15 +23,12 @@ tested = []
 for fname in files:
     with open(path/fname) as f:
         data = f.read()
-
     data = parse.remove_comments(data)
     data = data.splitlines()
-
-
     for line in data:
         if 'TEST_CASE' in line or 'SECTION' in line:
             cmd = line.split("\"")[1]
-            tested.append(cmd)
+            tested.append([cmd, fname])
 
 out = subprocess.run(['g', 'list'], stdout = subprocess.PIPE, encoding=locale.getpreferredencoding())
 all_cmd = out.stdout.splitlines()
@@ -33,18 +38,18 @@ all_cmd.pop(0)
 
 if args.startswith is not None:
     all_cmd = [cmd for cmd in all_cmd if cmd.startswith(args.startswith)]
-    tested = [cmd for cmd in tested if cmd.startswith(args.startswith)]
+    tested = [cmd for cmd in tested if cmd[0].startswith(args.startswith)]
 
+tn = [cmd[0] for cmd in tested]
 
-
-not_tested = [cmd for cmd in all_cmd if cmd not in tested]
-misnamed = [cmd for cmd in tested if cmd not in all_cmd]
-tested = [cmd for cmd in tested if cmd in all_cmd]
+not_tested = [cmd for cmd in all_cmd if cmd not in tn]
+misnamed = [cmd for cmd in tn if cmd not in all_cmd]
+tested = [cmd for cmd in tested if cmd[0] in all_cmd]
 
 
 print("\nThe following commands are tested:")
 for cmd in tested:
-    print(cmd)
+    print(f'{cmd[0]:>18} : {cmd[1]}')
 
 print("\nThe following commands are NOT tested:")
 for cmd in not_tested:

python/setup.py

@@ -8,7 +8,7 @@ import sys
 import setuptools
 import os
 
-__version__ = 'refactor'
+__version__ = os.environ.get('GIT_DESCRIBE_TAG', 'developer')
 
 
 def get_conda_path():
@@ -19,32 +19,33 @@ def get_conda_path():
     return os.environ['CONDA_PREFIX']
 
 
-class get_pybind_include(object):
-    """Helper class to determine the pybind11 include path
-    The purpose of this class is to postpone importing pybind11
-    until it is actually installed, so that the ``get_include()``
-    method can be invoked. """
+# class get_pybind_include(object):
+#     """Helper class to determine the pybind11 include path
+#     The purpose of this class is to postpone importing pybind11
+#     until it is actually installed, so that the ``get_include()``
+#     method can be invoked. """
 
-    def __init__(self, user=False):
-        self.user = user
+#     def __init__(self, user=False):
+#         self.user = user
 
-    def __str__(self):
-        import pybind11
-        return pybind11.get_include(self.user)
+#     def __str__(self):
+#         import pybind11
+#         return pybind11.get_include(self.user)
 
 
 ext_modules = [
     Extension(
-        '_sls_detector',
+        '_slsdet',
         ['src/main.cpp',
         'src/enums.cpp',
         'src/detector.cpp',
         'src/network.cpp'],
         include_dirs=[
             # Path to pybind11 headers
-            get_pybind_include(),
-            get_pybind_include(user=True),
-            os.path.join(get_conda_path(), 'include/slsDetectorPackage'),
+            # get_pybind_include(),
+            # get_pybind_include(user=True),
+            os.path.join('../libs/pybind11/include'),
+            os.path.join(get_conda_path(), 'include'),
 
         ],
         libraries=['SlsDetector', 'SlsReceiver', 'zmq'],
@@ -109,20 +110,28 @@ class BuildExt(build_ext):
             opts.append('/DVERSION_INFO=\\"%s\\"' % self.distribution.get_version())
         for ext in self.extensions:
             ext.extra_compile_args = opts
+
+        print('**************************************************')
+        print(ct)
+        print(opts)
+        print('**************************************************')
         build_ext.build_extensions(self)
         
 
+
+def get_shared_lib():
+    return [f for f in os.listdir('.') if '_slsdet' in f]
+
 setup(
-    name='sls_detector',
+    name='slsdet',
     version=__version__,
     author='Erik Frojdh',
     author_email='erik.frojdh@psi.ch',
-    url='https://github.com/slsdetectorgroup/sls_detector',
+    url='https://github.com/slsdetectorgroup/slsDetectorPackage',
     description='Detector API for SLS Detector Group detectors',
     long_description='',
     packages=find_packages(exclude=['contrib', 'docs', 'tests']),
     ext_modules=ext_modules,
-    install_requires=['pybind11>=2.2'],
     cmdclass={'build_ext': BuildExt},
     zip_safe=False,
 )

python/sls_detector/__init__.py

@@ -1,22 +0,0 @@
-# from .detector import Detector, DetectorError, free_shared_memory
-from .eiger import Eiger
-from .ctb import Ctb
-from .dacs import DetectorDacs, Dac
-from .detector import Detector
-from .jungfrau import Jungfrau
-from .mythen3 import Mythen3
-# from .jungfrau_ctb import JungfrauCTB
-# from _sls_detector import DetectorApi
-
-import _sls_detector
-
-defs = _sls_detector.slsDetectorDefs
-runStatus = _sls_detector.slsDetectorDefs.runStatus
-speedLevel = _sls_detector.slsDetectorDefs.speedLevel
-timingMode = _sls_detector.slsDetectorDefs.timingMode
-dacIndex = _sls_detector.slsDetectorDefs.dacIndex
-detectorType = _sls_detector.slsDetectorDefs.detectorType
-detectorSettings = _sls_detector.slsDetectorDefs.detectorSettings
-
-IpAddr = _sls_detector.IpAddr
-MacAddr = _sls_detector.MacAddr

python/sls_detector/ctb.py

@@ -1,121 +0,0 @@
-from .detector import Detector
-from .utils import element_if_equal
-from .dacs import DetectorDacs
-import _sls_detector
-dacIndex = _sls_detector.slsDetectorDefs.dacIndex
-from .detector_property import DetectorProperty
-
-class CtbDacs(DetectorDacs):
-    """
-    Ctb dacs
-    """
-    _dacs = [('dac0',  dacIndex(0), 0, 4000,    1400),
-             ('dac1',  dacIndex(1), 0, 4000,    1200),
-             ('dac2',  dacIndex(2), 0, 4000,    900),
-             ('dac3',  dacIndex(3), 0, 4000,    1050),
-             ('dac4',  dacIndex(4), 0, 4000,     1400),
-             ('dac5',  dacIndex(5), 0, 4000,    655),
-             ('dac6',  dacIndex(6), 0, 4000,    2000),
-             ('dac7',  dacIndex(7), 0, 4000,     1400),
-             ('dac8',  dacIndex(8), 0, 4000,    850),
-             ('dac9',  dacIndex(9), 0, 4000,    2000),
-             ('dac10', dacIndex(10), 0, 4000,    2294),
-             ('dac11', dacIndex(11), 0, 4000,    983),
-             ('dac12', dacIndex(12), 0, 4000,    1475),
-             ('dac13', dacIndex(13), 0, 4000,    1200),
-             ('dac14', dacIndex(14), 0, 4000,    1600),
-             ('dac15', dacIndex(15), 0, 4000,    1455),
-             ('dac16', dacIndex(16), 0, 4000,       0),
-             ('dac17', dacIndex(17), 0, 4000,    1000),
-            ]
-    _dacnames = [_d[0] for _d in _dacs]
-
-from .utils import element
-class Ctb(Detector):
-    def __init__(self, id = 0):
-        super().__init__(id)
-        self._frozen = False 
-        self._dacs = CtbDacs(self)
-    
-    @property
-    def dacs(self):
-        return self._dacs
-
-    @property
-    @element
-    def v_a(self):
-        return self.getDAC(dacIndex.V_POWER_A, True)
-
-    @v_a.setter
-    def v_a(self, value):
-        self.setDAC(dacIndex.V_POWER_A, value, True)
-
-    @property
-    @element
-    def v_b(self):
-        return self.getDAC(dacIndex.V_POWER_B, True)
-
-    @v_b.setter
-    def v_b(self, value):
-        self.setDAC(dacIndex.V_POWER_B, value, True)
-
-    @property
-    @element
-    def v_c(self):
-        return self.getDAC(dacIndex.V_POWER_C, True)
-
-    @v_c.setter
-    def v_c(self, value):
-        self.setDAC(dacIndex.V_POWER_C, value, True)
-
-    @property
-    @element
-    def v_d(self):
-        return self.getDAC(dacIndex.V_POWER_D, True)
-
-    @v_d.setter
-    def v_d(self, value):
-        self.setDAC(dacIndex.V_POWER_D, value, True)
-
-    @property
-    @element
-    def v_io(self):
-        return self.getDAC(dacIndex.V_POWER_IO, True)
-
-    @v_io.setter
-    def v_io(self, value):
-        self.setDAC(dacIndex.V_POWER_IO, value, True)
-
-    @property
-    @element
-    def v_limit(self):
-        return self.getDAC(dacIndex.V_LIMIT, True)
-
-    @v_limit.setter
-    def v_limit(self, value):
-        self.setDAC(dacIndex.V_LIMIT, value, True)
-
-    @property
-    @element
-    def im_a(self):
-        return self.getMeasuredCurrent(dacIndex.I_POWER_A)
-
-    @property
-    @element
-    def im_b(self):
-        return self.getMeasuredCurrent(dacIndex.I_POWER_B)
-
-    @property
-    @element
-    def im_c(self):
-        return self.getMeasuredCurrent(dacIndex.I_POWER_C)
-
-    @property
-    @element
-    def im_d(self):
-        return self.getMeasuredCurrent(dacIndex.I_POWER_D)
-
-    @property
-    @element
-    def im_io(self):
-        return self.getMeasuredCurrent(dacIndex.I_POWER_IO)

python/slsdet/__init__.py

@@ -0,0 +1,23 @@
+# from .detector import Detector, DetectorError, free_shared_memory
+from .eiger import Eiger
+from .ctb import Ctb
+from .dacs import DetectorDacs, Dac
+from .detector import Detector
+from .jungfrau import Jungfrau
+from .mythen3 import Mythen3
+# from .jungfrau_ctb import JungfrauCTB
+# from _slsdet import DetectorApi
+
+import _slsdet
+
+defs = _slsdet.slsDetectorDefs
+runStatus = _slsdet.slsDetectorDefs.runStatus
+speedLevel = _slsdet.slsDetectorDefs.speedLevel
+timingMode = _slsdet.slsDetectorDefs.timingMode
+dacIndex = _slsdet.slsDetectorDefs.dacIndex
+detectorType = _slsdet.slsDetectorDefs.detectorType
+detectorSettings = _slsdet.slsDetectorDefs.detectorSettings
+readoutMode = _slsdet.slsDetectorDefs.readoutMode
+
+IpAddr = _slsdet.IpAddr
+MacAddr = _slsdet.MacAddr

python/slsdet/ctb.py

@@ -0,0 +1,43 @@
+from .detector import Detector
+from .utils import element_if_equal
+from .dacs import DetectorDacs
+import _slsdet
+dacIndex = _slsdet.slsDetectorDefs.dacIndex
+from .detector_property import DetectorProperty
+
+class CtbDacs(DetectorDacs):
+    """
+    Ctb dacs
+    """
+    _dacs = [('dac0',  dacIndex(0), 0, 4000,    1400),
+             ('dac1',  dacIndex(1), 0, 4000,    1200),
+             ('dac2',  dacIndex(2), 0, 4000,    900),
+             ('dac3',  dacIndex(3), 0, 4000,    1050),
+             ('dac4',  dacIndex(4), 0, 4000,     1400),
+             ('dac5',  dacIndex(5), 0, 4000,    655),
+             ('dac6',  dacIndex(6), 0, 4000,    2000),
+             ('dac7',  dacIndex(7), 0, 4000,     1400),
+             ('dac8',  dacIndex(8), 0, 4000,    850),
+             ('dac9',  dacIndex(9), 0, 4000,    2000),
+             ('dac10', dacIndex(10), 0, 4000,    2294),
+             ('dac11', dacIndex(11), 0, 4000,    983),
+             ('dac12', dacIndex(12), 0, 4000,    1475),
+             ('dac13', dacIndex(13), 0, 4000,    1200),
+             ('dac14', dacIndex(14), 0, 4000,    1600),
+             ('dac15', dacIndex(15), 0, 4000,    1455),
+             ('dac16', dacIndex(16), 0, 4000,       0),
+             ('dac17', dacIndex(17), 0, 4000,    1000),
+            ]
+    _dacnames = [_d[0] for _d in _dacs]
+
+from .utils import element
+class Ctb(Detector):
+    def __init__(self, id = 0):
+        super().__init__(id)
+        self._frozen = False 
+        self._dacs = CtbDacs(self)
+    
+    @property
+    def dacs(self):
+        return self._dacs
+

python/slsdet/dacs.py

@@ -1,9 +1,9 @@
 from .detector_property import DetectorProperty
 from functools import partial
 import numpy as np
-import _sls_detector
+import _slsdet
 from .detector import freeze
-dacIndex = _sls_detector.slsDetectorDefs.dacIndex
+dacIndex = _slsdet.slsDetectorDefs.dacIndex
 class Dac(DetectorProperty):
     """
     This class represents a dac on the detector. One instance handles all

python/slsdet/detector.py

@@ -1,33 +1,18 @@
-from _sls_detector import CppDetectorApi
-from _sls_detector import slsDetectorDefs
+from _slsdet import CppDetectorApi
+from _slsdet import slsDetectorDefs
 
 runStatus = slsDetectorDefs.runStatus
 speedLevel = slsDetectorDefs.speedLevel
 dacIndex = slsDetectorDefs.dacIndex
 
 from .utils import element_if_equal, all_equal, get_set_bits, list_to_bitmask
-from .utils import Geometry, to_geo
+from .utils import Geometry, to_geo, element
 from .registers import Register, Adc_register
 import datetime as dt
 
 from functools import wraps
 from collections import namedtuple
 
-# class Register:
-#     """
-#     Helper class to read and write to registers using a
-#     more Pythonic syntax
-#     """
-#     def __init__(self, detector):
-#         self._detector = detector
-
-#     def __getitem__(self, key):
-#         return self._detector.readRegister(key)
-
-#     def __setitem__(self, key, value):
-#         self._detector.writeRegister(key, value)
-
-
 def freeze(cls):
     cls._frozen = False
 
@@ -774,6 +759,22 @@ class Detector(CppDetectorApi):
     CTB stuff 
     """
 
+    @property
+    def runclk(self):
+        return element_if_equal(self.getRUNClock())
+
+    @runclk.setter
+    def runclk(self, freq):
+        self.setRUNClock(freq)
+
+    @property
+    def romode(self):
+        return element_if_equal(self.getReadoutMode())
+
+    @romode.setter
+    def romode(self, mode):
+        self.setReadoutMode(mode)
+
     @property
     def asamples(self):
         return element_if_equal(self.getNumberOfAnalogSamples())
@@ -839,9 +840,249 @@ class Detector(CppDetectorApi):
         return element_if_equal(self.getMaxADCPhaseShift())
 
     @property
-    def maxclkphaseshift(self):
-        return element_if_equal(self.getMaxClockPhaseShift())
+    def adcphase(self):
+        return element_if_equal(self.getADCPhase())
+    
+    @adcphase.setter
+    def adcphase(self, value):
+        self.setADCPhase(value)
 
     @property
-    def adcphase(self):
-        return element_if_equal()
+    def adcpipeline(self):
+        return element_if_equal(self.getADCPipeline())
+
+    @adcpipeline.setter
+    def adcpipeline(self, value):
+        self.setADCPipeline(value)
+
+    @property
+    def adcclk(self):
+        return element_if_equal(self.getADCClock())
+
+    @adcclk.setter
+    def adcclk(self, value):
+        self.setADCClock(value)
+
+    @property
+    def syncclk(self):
+        return element_if_equal(self.getSYNCClock())
+    
+    @property
+    def pattern(self):
+        #TODO! Clean fix
+        print("Set only")
+        return 0
+
+    @property
+    def patclkctrl(self):
+        return element_if_equal(self.getPatternClockControl())
+
+    @patclkctrl.setter
+    def patclkctrl(self, mask):
+        self.setPatternClockControl(mask)
+
+    # patioctrl
+    @property
+    def patioctrl(self):
+        return element_if_equal(self.getPatternIOControl())
+
+    @patioctrl.setter
+    def patioctrl(self, mask):
+        self.setPatternIOControl(mask)
+
+    @property
+    def patlimits(self):
+        return element_if_equal(self.getPatternLoopAddresses(-1))
+
+    @patlimits.setter
+    def patlimits(self, lim):
+        self.setPatternLoopAddresses(-1, lim[0], lim[1])
+
+    @property
+    def patmask(self):
+        return element_if_equal(self.getPatternMask())
+
+    @patmask.setter
+    def patmask(self, mask):
+        self.setPatternMask(mask)
+
+    @pattern.setter
+    def pattern(self, fname):
+        self.setPattern(fname)
+
+    @property
+    def patwait0(self):
+        return element_if_equal(self.getPatternWaitAddr(0))
+
+    @patwait0.setter
+    def patwait0(self, addr):
+        self.setPatternWaitAddr(0, addr)
+
+    @property
+    def patwait1(self):
+        return element_if_equal(self.getPatternWaitAddr(1))
+
+    @patwait1.setter
+    def patwait1(self, addr):
+        self.setPatternWaitAddr(1, addr)
+
+    @property
+    def patwait2(self):
+        return element_if_equal(self.getPatternWaitAddr(2))
+
+    @patwait2.setter
+    def patwait2(self, addr):
+        self.setPatternWaitAddr(2, addr)
+
+    @property
+    def patwaittime0(self):
+        return element_if_equal(self.getPatternWaitTime(0))
+
+    @patwaittime0.setter
+    def patwaittime0(self, nclk):
+        self.setPatternWaitTime(0, nclk)
+
+    @property
+    def patwaittime1(self):
+        return element_if_equal(self.getPatternWaitTime(1))
+
+    @patwaittime1.setter
+    def patwaittime1(self, nclk):
+        self.setPatternWaitTime(1, nclk)
+
+    @property
+    def patwaittime2(self):
+        return element_if_equal(self.getPatternWaitTime(2))
+
+    @patwaittime2.setter
+    def patwaittime2(self, nclk):
+        self.setPatternWaitTime(2, nclk)
+
+
+    @property
+    def patloop0(self):
+        return element_if_equal(self.getPatternLoopAddresses(0))
+
+    @patloop0.setter
+    def patloop0(self, addr):
+        self.setPatternLoopAddresses(0, addr[0], addr[1])
+
+    @property
+    def patloop1(self):
+        return element_if_equal(self.getPatternLoopAddresses(1))
+
+    @patloop1.setter
+    def patloop1(self, addr):
+        self.setPatternLoopAddresses(1, addr[0], addr[1])
+
+    @property
+    def patloop2(self):
+        return element_if_equal(self.getPatternLoopAddresses(2))
+
+    @patloop2.setter
+    def patloop2(self, addr):
+        self.setPatternLoopAddresses(2, addr[0], addr[1])
+
+    @property
+    def patnloop0(self):
+        return element_if_equal(self.getPatternLoopCycles(0))
+
+    @patnloop0.setter
+    def patnloop0(self, n):
+        self.setPatternLoopCycles(0, n)
+
+    @property
+    def patnloop1(self):
+        return element_if_equal(self.getPatternLoopCycles(1))
+
+    @patnloop1.setter
+    def patnloop1(self, n):
+        self.setPatternLoopCycles(1, n)
+
+    @property
+    def patnloop2(self):
+        return element_if_equal(self.getPatternLoopCycles(2))
+
+    @patnloop2.setter
+    def patnloop2(self, n):
+        self.setPatternLoopCycles(2, n)
+
+
+    @property
+    @element
+    def v_a(self):
+        return self.getDAC(dacIndex.V_POWER_A, True)
+
+    @v_a.setter
+    def v_a(self, value):
+        self.setDAC(dacIndex.V_POWER_A, value, True)
+
+    @property
+    @element
+    def v_b(self):
+        return self.getDAC(dacIndex.V_POWER_B, True)
+
+    @v_b.setter
+    def v_b(self, value):
+        self.setDAC(dacIndex.V_POWER_B, value, True)
+
+    @property
+    @element
+    def v_c(self):
+        return self.getDAC(dacIndex.V_POWER_C, True)
+
+    @v_c.setter
+    def v_c(self, value):
+        self.setDAC(dacIndex.V_POWER_C, value, True)
+
+    @property
+    @element
+    def v_d(self):
+        return self.getDAC(dacIndex.V_POWER_D, True)
+
+    @v_d.setter
+    def v_d(self, value):
+        self.setDAC(dacIndex.V_POWER_D, value, True)
+
+    @property
+    @element
+    def v_io(self):
+        return self.getDAC(dacIndex.V_POWER_IO, True)
+
+    @v_io.setter
+    def v_io(self, value):
+        self.setDAC(dacIndex.V_POWER_IO, value, True)
+
+    @property
+    @element
+    def v_limit(self):
+        return self.getDAC(dacIndex.V_LIMIT, True)
+
+    @v_limit.setter
+    def v_limit(self, value):
+        self.setDAC(dacIndex.V_LIMIT, value, True)
+
+    @property
+    @element
+    def im_a(self):
+        return self.getMeasuredCurrent(dacIndex.I_POWER_A)
+
+    @property
+    @element
+    def im_b(self):
+        return self.getMeasuredCurrent(dacIndex.I_POWER_B)
+
+    @property
+    @element
+    def im_c(self):
+        return self.getMeasuredCurrent(dacIndex.I_POWER_C)
+
+    @property
+    @element
+    def im_d(self):
+        return self.getMeasuredCurrent(dacIndex.I_POWER_D)
+
+    @property
+    @element
+    def im_io(self):
+        return self.getMeasuredCurrent(dacIndex.I_POWER_IO)

python/slsdet/eiger.py

@@ -11,8 +11,8 @@ from .detector import Detector
 
 # from .adcs import Adc, DetectorAdcs
 from .dacs import DetectorDacs
-import _sls_detector
-dacIndex = _sls_detector.slsDetectorDefs.dacIndex
+import _slsdet
+dacIndex = _slsdet.slsDetectorDefs.dacIndex
 from .detector_property import DetectorProperty
 # from .utils import element_if_equal
 # from sls_detector.errors import DetectorValueError, DetectorError

python/slsdet/jungfrau.py

@@ -9,8 +9,8 @@ from .detector import Detector, freeze
 
 # from .adcs import Adc, DetectorAdcs
 from .dacs import DetectorDacs
-import _sls_detector
-dacIndex = _sls_detector.slsDetectorDefs.dacIndex
+import _slsdet
+dacIndex = _slsdet.slsDetectorDefs.dacIndex
 from .detector_property import DetectorProperty
 
 # @freeze

python/slsdet/lookup.py

@@ -0,0 +1,9 @@
+from .detector import Detector
+
+def view(name, det = Detector):
+    names =  find(name, det)
+    for n in names:
+        print(n)
+
+def find(name, det = Detector):
+    return [n for n in dir(det) if name.lower() in n.lower()]

python/slsdet/mythen3.py

@@ -9,8 +9,8 @@ from .detector import Detector, freeze
 
 # from .adcs import Adc, DetectorAdcs
 from .dacs import DetectorDacs
-import _sls_detector
-dacIndex = _sls_detector.slsDetectorDefs.dacIndex
+import _slsdet
+dacIndex = _slsdet.slsDetectorDefs.dacIndex
 from .detector_property import DetectorProperty
 
 # vcassh 1200, 

python/slsdet/utils.py

@@ -2,10 +2,13 @@
 Utility functions that are useful for testing and troubleshooting
 but not directly used in controlling the detector
 """
+
+
 from collections import namedtuple
-import _sls_detector #C++ lib
+import _slsdet #C++ lib
 import functools
 
+
 Geometry = namedtuple('Geometry', ['x', 'y'])
 
 def get_set_bits(mask):
@@ -26,7 +29,7 @@ def list_to_bitmask(values):
     return mask
 
 def to_geo(value):
-    if isinstance(value, _sls_detector.xy):
+    if isinstance(value, _slsdet.xy):
         return Geometry(x = value.x, y = value.y)
     else:
         raise ValueError("Can only convert sls_detector.xy")
@@ -65,3 +68,4 @@ def eiger_register_to_time(register):
     clocks = register >> 3
     exponent = register & 0b111
     return clocks*10**exponent / 100e6
+

python/sphinx/cpp_api.rst

@@ -2,7 +2,7 @@ C++ API
 =====================================================
 
 
-.. py:currentmodule:: _sls_detector
+.. py:currentmodule:: _slsdet
 
 .. autoclass:: DetectorApi
     :members:  

python/sphinx/index.rst

@@ -2,7 +2,7 @@ sls_detector - Python interface for the slsDetectorsPackage
 ==============================================================
 
 sls_detector provide Python bindings to the slsDetectorsPackage using mainly the 
-multiSlsDetector API. This module contains two parts, a compiled C module to
+DetectorImpl API. This module contains two parts, a compiled C module to
 expose the API and a Python class to offer a more Pythonic interface.
 
 

python/src/detector.cpp

@@ -74,9 +74,12 @@ void init_det(py::module &m) {
              py::arg() = Positions{})
         .def("getNumberOfTriggersLeft", &Detector::getNumberOfTriggersLeft,
              py::arg() = Positions{})
+        .def("getPeriodLeft", &Detector::getPeriodLeft, py::arg() = Positions{})
         .def("getDelayAfterTriggerLeft", &Detector::getDelayAfterTriggerLeft,
              py::arg() = Positions{})
-        .def("getPeriodLeft", &Detector::getPeriodLeft, py::arg() = Positions{})
+        .def("getTimingMode", &Detector::getTimingMode, py::arg() = Positions{})
+        .def("setTimingMode", &Detector::setTimingMode, py::arg(),
+             py::arg() = Positions{})
         .def("getSpeed", &Detector::getSpeed, py::arg() = Positions{})
         .def("setSpeed", &Detector::setSpeed, py::arg(),
              py::arg() = Positions{})
@@ -109,6 +112,9 @@ void init_det(py::module &m) {
              py::arg(), py::arg() = Positions{})
         .def("getHighVoltage", &Detector::getHighVoltage,
              py::arg() = Positions{})
+        .def("getPowerChip", &Detector::getPowerChip, py::arg() = Positions{})
+        .def("setPowerChip", &Detector::setPowerChip, py::arg(),
+             py::arg() = Positions{})
         .def("setHighVoltage", &Detector::setHighVoltage, py::arg(),
              py::arg() = Positions{})
         .def("getTemperature", &Detector::getTemperature, py::arg(),
@@ -121,9 +127,6 @@ void init_det(py::module &m) {
              py::arg() = Positions{})
         .def("setOnChipDAC", &Detector::setOnChipDAC, py::arg(), py::arg(),
              py::arg(), py::arg() = Positions{})
-        .def("getTimingMode", &Detector::getTimingMode, py::arg() = Positions{})
-        .def("setTimingMode", &Detector::setTimingMode, py::arg(),
-             py::arg() = Positions{})
         .def("acquire", &Detector::acquire)
         .def("clearAcquiringFlag", &Detector::clearAcquiringFlag)
         .def("startReceiver", &Detector::startReceiver)
@@ -395,9 +398,6 @@ void init_det(py::module &m) {
              py::arg() = Positions{})
         .def("resetTemperatureEvent", &Detector::resetTemperatureEvent,
              py::arg() = Positions{})
-        .def("getPowerChip", &Detector::getPowerChip, py::arg() = Positions{})
-        .def("setPowerChip", &Detector::setPowerChip, py::arg(),
-             py::arg() = Positions{})
         .def("getAutoCompDisable", &Detector::getAutoCompDisable,
              py::arg() = Positions{})
         .def("setAutoCompDisable", &Detector::setAutoCompDisable, py::arg(),
@@ -428,6 +428,13 @@ void init_det(py::module &m) {
              py::arg() = Positions{})
         .def("setImageTestMode", &Detector::setImageTestMode, py::arg(),
              py::arg() = Positions{})
+        .def("getNumberOfBursts", &Detector::getNumberOfBursts,
+             py::arg() = Positions{})
+        .def("setNumberOfBursts", &Detector::setNumberOfBursts, py::arg())
+        .def("getBurstPeriod", &Detector::getBurstPeriod,
+             py::arg() = Positions{})
+        .def("setBurstPeriod", &Detector::setBurstPeriod, py::arg(),
+             py::arg() = Positions{})
         .def("getInjectChannel", &Detector::getInjectChannel,
              py::arg() = Positions{})
         .def("setInjectChannel", &Detector::setInjectChannel, py::arg(),
@@ -438,9 +445,17 @@ void init_det(py::module &m) {
              py::arg(), py::arg(), py::arg() = Positions{})
         .def("setVetoReference", &Detector::setVetoReference, py::arg(),
              py::arg(), py::arg() = Positions{})
+        .def("getBurstMode", &Detector::getBurstMode, py::arg() = Positions{})
         .def("setBurstMode", &Detector::setBurstMode, py::arg(),
              py::arg() = Positions{})
-        .def("getBurstMode", &Detector::getBurstMode, py::arg() = Positions{})
+        .def("getCurrentSource", &Detector::getCurrentSource,
+             py::arg() = Positions{})
+        .def("setCurrentSource", &Detector::setCurrentSource, py::arg(),
+             py::arg() = Positions{})
+        .def("getTimingSource", &Detector::getTimingSource,
+             py::arg() = Positions{})
+        .def("setTimingSource", &Detector::setTimingSource, py::arg(),
+             py::arg() = Positions{})
         .def("getCounterMask", &Detector::getCounterMask,
              py::arg() = Positions{})
         .def("setCounterMask", &Detector::setCounterMask, py::arg(),
@@ -610,6 +625,8 @@ void init_det(py::module &m) {
              py::arg() = Positions{})
         .def("writeAdcRegister", &Detector::writeAdcRegister, py::arg(),
              py::arg(), py::arg() = Positions{})
+        .def("getInitialChecks", &Detector::getInitialChecks)
+        .def("setInitialChecks", &Detector::setInitialChecks, py::arg())
         .def("getControlPort", &Detector::getControlPort,
              py::arg() = Positions{})
         .def("setControlPort", &Detector::setControlPort, py::arg(),

python/src/enums.cpp

@@ -169,7 +169,7 @@ void init_enums(py::module &m) {
         .value("VB_COMP_FE", slsDetectorDefs::dacIndex::VB_COMP_FE)
         .value("VB_COMP_ADC", slsDetectorDefs::dacIndex::VB_COMP_ADC)
         .value("VCOM_CDS", slsDetectorDefs::dacIndex::VCOM_CDS)
-        .value("VREF_RESTORE", slsDetectorDefs::dacIndex::VREF_RESTORE)
+        .value("VREF_RSTORE", slsDetectorDefs::dacIndex::VREF_RSTORE)
         .value("VB_OPA_1ST", slsDetectorDefs::dacIndex::VB_OPA_1ST)
         .value("VREF_COMP_FE", slsDetectorDefs::dacIndex::VREF_COMP_FE)
         .value("VCOM_ADC1", slsDetectorDefs::dacIndex::VCOM_ADC1)
@@ -278,4 +278,17 @@ void init_enums(py::module &m) {
                slsDetectorDefs::detectorModeType::INTERPOLATING)
         .value("ANALOG", slsDetectorDefs::detectorModeType::ANALOG)
         .export_values();
+
+    py::enum_<slsDetectorDefs::burstMode>(Defs, "burstMode")
+        .value("BURST_OFF", slsDetectorDefs::burstMode::BURST_OFF)
+        .value("BURST_INTERNAL", slsDetectorDefs::burstMode::BURST_INTERNAL)
+        .value("BURST_EXTERNAL", slsDetectorDefs::burstMode::BURST_EXTERNAL)
+        .export_values();
+
+    py::enum_<slsDetectorDefs::timingSourceType>(Defs, "timingSourceType")
+        .value("TIMING_INTERNAL",
+               slsDetectorDefs::timingSourceType::TIMING_INTERNAL)
+        .value("TIMING_EXTERNAL",
+               slsDetectorDefs::timingSourceType::TIMING_EXTERNAL)
+        .export_values();
 }

python/src/main.cpp

@@ -19,7 +19,7 @@ void init_enums(py::module &);
 void init_experimental(py::module &);
 void init_det(py::module &);
 void init_network(py::module &);
-PYBIND11_MODULE(_sls_detector, m) {
+PYBIND11_MODULE(_slsdet, m) {
     m.doc() = R"pbdoc(
         C/C++ API
         -----------------------

python/unit-tests/detector_eiger.py

@@ -16,12 +16,12 @@ def d():
 
 
 def test_acq_call(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.acq')
+    m = mocker.patch('_slsdet.DetectorApi.acq')
     d.acq()
     m.assert_called_once_with()
 
 def test_busy_call(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getAcquiringFlag')
+    m = mocker.patch('_slsdet.DetectorApi.getAcquiringFlag')
     m.return_value = False
     assert d.busy == False
 
@@ -31,103 +31,103 @@ def test_assign_to_detector_type(d):
         d.detector_type = 'Eiger'
 
 def test_det_type(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getDetectorType')
+    m = mocker.patch('_slsdet.DetectorApi.getDetectorType')
     m.return_value = 'Eiger'
     assert d.detector_type == 'Eiger'
 
 def test_set_dynamic_range_4(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setDynamicRange')
+    m = mocker.patch('_slsdet.DetectorApi.setDynamicRange')
     d.dynamic_range = 4
     m.assert_called_with(4)
 
 def test_set_dynamic_range_8(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setDynamicRange')
+    m = mocker.patch('_slsdet.DetectorApi.setDynamicRange')
     d.dynamic_range = 8
     m.assert_called_with(8)
 
 
 def test_set_dynamic_range_16(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setDynamicRange')
+    m = mocker.patch('_slsdet.DetectorApi.setDynamicRange')
     d.dynamic_range = 16
     m.assert_called_with(16)
 
 def test_set_dynamic_range_32(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setDynamicRange')
+    m = mocker.patch('_slsdet.DetectorApi.setDynamicRange')
     d.dynamic_range = 32
     m.assert_called_with(32)
 
 def test_set_dynamic_range_raises_exception(d, mocker):
-    mocker.patch('_sls_detector.DetectorApi.setDynamicRange')
+    mocker.patch('_slsdet.DetectorApi.setDynamicRange')
     with pytest.raises(ValueError):
         d.dynamic_range = 17
 
 def test_get_dynamic_range_32(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getDynamicRange')
+    m = mocker.patch('_slsdet.DetectorApi.getDynamicRange')
     m.return_value = 32
     dr = d.dynamic_range
     assert dr == 32
 
 def test_eiger_matrix_reset(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getCounterBit')
+    m = mocker.patch('_slsdet.DetectorApi.getCounterBit')
     m.return_value = True
     assert d.eiger_matrix_reset == True
 
 def test_set_eiger_matrix_reset(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setCounterBit')
+    m = mocker.patch('_slsdet.DetectorApi.setCounterBit')
     d.eiger_matrix_reset = True
     m.assert_called_once_with(True)
 
 
 def test_get_exposure_time(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getExposureTime')
+    m = mocker.patch('_slsdet.DetectorApi.getExposureTime')
     m.return_value = 100000000
     assert d.exposure_time == 0.1
 
 def test_set_exposure_time(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setExposureTime')
+    m = mocker.patch('_slsdet.DetectorApi.setExposureTime')
     d.exposure_time = 1.5
     m.assert_called_once_with(1500000000)
 
 def test_set_exposure_time_less_than_zero(d, mocker):
-    mocker.patch('_sls_detector.DetectorApi.setExposureTime')
+    mocker.patch('_slsdet.DetectorApi.setExposureTime')
     with pytest.raises(ValueError):
         d.exposure_time = -7
 
 
 def test_get_file_index(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getFileIndex')
+    m = mocker.patch('_slsdet.DetectorApi.getFileIndex')
     m.return_value = 8
     assert d.file_index == 8
 
 def test_set_file_index(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setFileIndex')
+    m = mocker.patch('_slsdet.DetectorApi.setFileIndex')
     d.file_index = 9
     m.assert_called_with(9)
 
 
 def test_set_file_index_raises_on_neg(d, mocker):
-    mocker.patch('_sls_detector.DetectorApi.setFileIndex')
+    mocker.patch('_slsdet.DetectorApi.setFileIndex')
     with pytest.raises(ValueError):
         d.file_index = -9
 
 
 def test_get_file_name(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getFileName')
+    m = mocker.patch('_slsdet.DetectorApi.getFileName')
     d.file_name
     m.assert_called_once_with()
 
 def test_set_file_name(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setFileName')
+    m = mocker.patch('_slsdet.DetectorApi.setFileName')
     d.file_name = 'hej'
     m.assert_called_once_with('hej')
 
 def test_get_file_path(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getFilePath')
+    m = mocker.patch('_slsdet.DetectorApi.getFilePath')
     d.file_path
     m.assert_called_once_with()
 
 def test_set_file_path_when_path_exists(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setFilePath')
+    m = mocker.patch('_slsdet.DetectorApi.setFilePath')
     #To avoid raising an exception because path is not there
     mock_os = mocker.patch('os.path.exists')
     mock_os.return_value = True
@@ -135,25 +135,25 @@ def test_set_file_path_when_path_exists(d, mocker):
     m.assert_called_once_with('/path/to/something/')
 
 def test_set_file_path_raises_when_not_exists(d, mocker):
-    mocker.patch('_sls_detector.DetectorApi.setFilePath')
+    mocker.patch('_slsdet.DetectorApi.setFilePath')
     mock_os = mocker.patch('os.path.exists')
     mock_os.return_value = False
     with pytest.raises(FileNotFoundError):
         d.file_path = '/path/to/something/'
 
 def test_get_file_write(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getFileWrite')
+    m = mocker.patch('_slsdet.DetectorApi.getFileWrite')
     m.return_value = False
     assert d.file_write == False
 
 def test_set_file_write(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setFileWrite')
+    m = mocker.patch('_slsdet.DetectorApi.setFileWrite')
     d.file_write = True
     m.assert_called_once_with(True)
 
 
 def test_get_firmware_version(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getFirmwareVersion')
+    m = mocker.patch('_slsdet.DetectorApi.getFirmwareVersion')
     m.return_value = 20
     assert d.firmware_version == 20
 
@@ -162,38 +162,38 @@ def test_cannot_set_fw_version(d):
         d.firmware_version = 20
 
 def test_get_high_voltage_call_signature(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getDac')
+    m = mocker.patch('_slsdet.DetectorApi.getDac')
     d.high_voltage
     m.assert_called_once_with('vhighvoltage', -1)
 
 def test_get_high_voltage(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getDac')
+    m = mocker.patch('_slsdet.DetectorApi.getDac')
     m.return_value = 80
     assert d.high_voltage == 80
 
 #self._api.setDac('vhighvoltage', -1, voltage)
 def test_set_high_voltage(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setDac')
+    m = mocker.patch('_slsdet.DetectorApi.setDac')
     d.high_voltage = 80
     m.assert_called_once_with('vhighvoltage', -1, 80)
 
 def test_decode_hostname_two_names(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getHostname')
+    m = mocker.patch('_slsdet.DetectorApi.getHostname')
     m.return_value = 'beb059+beb048+'
     assert d.hostname == ['beb059', 'beb048']
 
 def test_decode_hostname_four_names(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getHostname')
+    m = mocker.patch('_slsdet.DetectorApi.getHostname')
     m.return_value = 'beb059+beb048+beb120+beb153+'
     assert d.hostname == ['beb059', 'beb048', 'beb120', 'beb153']
 
 def test_decode_hostname_blank(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getHostname')
+    m = mocker.patch('_slsdet.DetectorApi.getHostname')
     m.return_value = ''
     assert d.hostname == []
 
 def test_get_image_size_gives_correct_size(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getImageSize')
+    m = mocker.patch('_slsdet.DetectorApi.getImageSize')
     m.return_value = (512,1024)
     im_size = d.image_size
     assert im_size.rows == 512
@@ -202,7 +202,7 @@ def test_get_image_size_gives_correct_size(d, mocker):
 
 
 def test_load_config(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.readConfigurationFile')
+    m = mocker.patch('_slsdet.DetectorApi.readConfigurationFile')
     #To avoid raising an exception because path is not there
     mock_os = mocker.patch('os.path.isfile')
     mock_os.return_value = True
@@ -210,14 +210,14 @@ def test_load_config(d, mocker):
     m.assert_called_once_with('/path/to/my/file.config')
 
 def test_load_config_raises_when_file_is_not_found(d, mocker):
-    mocker.patch('_sls_detector.DetectorApi.readConfigurationFile')
+    mocker.patch('_slsdet.DetectorApi.readConfigurationFile')
     mock_os = mocker.patch('os.path.isfile')
     mock_os.return_value = False
     with pytest.raises(FileNotFoundError):
         d.load_config('/path/to/my/file.config')
 
 def test_load_parameters(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.readParametersFile')
+    m = mocker.patch('_slsdet.DetectorApi.readParametersFile')
     #To avoid raising an exception because path is not there
     mock_os = mocker.patch('os.path.isfile')
     mock_os.return_value = True
@@ -225,7 +225,7 @@ def test_load_parameters(d, mocker):
     m.assert_called_once_with('/path/to/my/file.par')
 
 def test_load_parameters_raises_when_file_is_not_found(d, mocker):
-    mocker.patch('_sls_detector.DetectorApi.readParametersFile')
+    mocker.patch('_slsdet.DetectorApi.readParametersFile')
     mock_os = mocker.patch('os.path.isfile')
     mock_os.return_value = False
     with pytest.raises(FileNotFoundError):
@@ -233,14 +233,14 @@ def test_load_parameters_raises_when_file_is_not_found(d, mocker):
 
 #getDetectorGeometry
 def test_get_module_geometry_gives_correct_size(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getDetectorGeometry')
+    m = mocker.patch('_slsdet.DetectorApi.getDetectorGeometry')
     m.return_value = (13,7)
     g = d.module_geometry
     assert g.vertical == 7
     assert g.horizontal == 13
 
 def test_get_module_geometry_access(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getDetectorGeometry')
+    m = mocker.patch('_slsdet.DetectorApi.getDetectorGeometry')
     m.return_value = (12,3)
     assert d.module_geometry[0] == 12
     assert d.module_geometry[1] == 3
@@ -248,237 +248,237 @@ def test_get_module_geometry_access(d, mocker):
     assert d.module_geometry.horizontal == 12
 
 def test_get_n_frames(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getNumberOfFrames')
+    m = mocker.patch('_slsdet.DetectorApi.getNumberOfFrames')
     m.return_value = 3
     assert d.n_frames == 3
 
 def test_set_n_frames(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setNumberOfFrames')
+    m = mocker.patch('_slsdet.DetectorApi.setNumberOfFrames')
     d.n_frames = 9
     m.assert_called_once_with(9)
 
 def test_set_n_frames_raises_on_neg(d, mocker):
-    mocker.patch('_sls_detector.DetectorApi.setNumberOfFrames')
+    mocker.patch('_slsdet.DetectorApi.setNumberOfFrames')
     with pytest.raises(ValueError):
         d.n_frames = -1
 
 def test_set_n_frames_raises_on_zero(d, mocker):
-    mocker.patch('_sls_detector.DetectorApi.setNumberOfFrames')
+    mocker.patch('_slsdet.DetectorApi.setNumberOfFrames')
     with pytest.raises(ValueError):
         d.n_frames = 0
 
 def test_get_n_modules(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getNumberOfDetectors')
+    m = mocker.patch('_slsdet.DetectorApi.getNumberOfDetectors')
     m.return_value = 12
     assert d.n_modules == 12
 
 def test_get_period_time(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getPeriod')
+    m = mocker.patch('_slsdet.DetectorApi.getPeriod')
     m.return_value = 130000000
     assert d.period == 0.13
 
 def test_set_period_time(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setPeriod')
+    m = mocker.patch('_slsdet.DetectorApi.setPeriod')
     d.period = 1.953
     m.assert_called_once_with(1953000000)
 
 def test_set_period_time_less_than_zero(d, mocker):
-    mocker.patch('_sls_detector.DetectorApi.setPeriod')
+    mocker.patch('_slsdet.DetectorApi.setPeriod')
     with pytest.raises(ValueError):
         d.period = -7
 
 def test_pulse_chip_call(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.pulseChip')
+    m = mocker.patch('_slsdet.DetectorApi.pulseChip')
     d.pulse_chip(15)
     m.assert_called_once_with(15)
 
 def test_pulse_chip_call_minus_one(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.pulseChip')
+    m = mocker.patch('_slsdet.DetectorApi.pulseChip')
     d.pulse_chip(-1)
     m.assert_called_once_with(-1)
 
 def test_pulse_chip_asserts_on_smaller_than_minus_one(d, mocker):
-    mocker.patch('_sls_detector.DetectorApi.pulseChip')
+    mocker.patch('_slsdet.DetectorApi.pulseChip')
     with pytest.raises(ValueError):
         d.pulse_chip(-3)
 #--------------------------------------------------------------------subexptime
 def test_get_sub_exposure_time(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getSubExposureTime')
+    m = mocker.patch('_slsdet.DetectorApi.getSubExposureTime')
     m.return_value = 2370000
     assert d.sub_exposure_time == 0.00237
 
 
 def test_set_sub_exposure_time(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setSubExposureTime')
+    m = mocker.patch('_slsdet.DetectorApi.setSubExposureTime')
     d.sub_exposure_time = 0.002
     m.assert_called_once_with(2000000)
 
 def test_set_sub_exposure_time_raises_on_zero(d, mocker):
-    mocker.patch('_sls_detector.DetectorApi.setSubExposureTime')
+    mocker.patch('_slsdet.DetectorApi.setSubExposureTime')
     with pytest.raises(ValueError):
         d.sub_exposure_time = 0
 
 #-------------------------------------------------------------Rate correction
 def test_get_rate_correction(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getRateCorrection')
+    m = mocker.patch('_slsdet.DetectorApi.getRateCorrection')
     m.return_value = [132,129]
     assert d.rate_correction == [132,129]
 
 def test_set_rate_correction(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setRateCorrection')
-    mock_n = mocker.patch('_sls_detector.DetectorApi.getNumberOfDetectors')
+    m = mocker.patch('_slsdet.DetectorApi.setRateCorrection')
+    mock_n = mocker.patch('_slsdet.DetectorApi.getNumberOfDetectors')
     mock_n.return_value = 3
     d.rate_correction = [123,90,50]
     m.assert_called_once_with([123,90,50])
 
 def test_set_rate_correction_raises_on_wrong_number_of_values(d, mocker):
-    mocker.patch('_sls_detector.DetectorApi.setRateCorrection')
-    mock_n = mocker.patch('_sls_detector.DetectorApi.getNumberOfDetectors')
+    mocker.patch('_slsdet.DetectorApi.setRateCorrection')
+    mock_n = mocker.patch('_slsdet.DetectorApi.getNumberOfDetectors')
     mock_n.return_value = 4
     with pytest.raises(ValueError):
         d.rate_correction = [123,90,50]
 
 #----------------------------------------------------------------Readout clock
 def test_get_readout_clock_0(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getReadoutClockSpeed')
+    m = mocker.patch('_slsdet.DetectorApi.getReadoutClockSpeed')
     m.return_value = 0
     assert d.readout_clock == 'Full Speed'
 
 def test_get_readout_clock_1(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getReadoutClockSpeed')
+    m = mocker.patch('_slsdet.DetectorApi.getReadoutClockSpeed')
     m.return_value = 1
     assert d.readout_clock == 'Half Speed'
 
 def test_get_readout_clock_2(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getReadoutClockSpeed')
+    m = mocker.patch('_slsdet.DetectorApi.getReadoutClockSpeed')
     m.return_value = 2
     assert d.readout_clock == 'Quarter Speed'
 
 def test_get_readout_clock_3(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getReadoutClockSpeed')
+    m = mocker.patch('_slsdet.DetectorApi.getReadoutClockSpeed')
     m.return_value = 3
     assert d.readout_clock == 'Super Slow Speed'
 
 def test_set_readout_clock_0(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setReadoutClockSpeed')
+    m = mocker.patch('_slsdet.DetectorApi.setReadoutClockSpeed')
     d.readout_clock = 'Full Speed'
     m.assert_called_once_with(0)
 
 def test_set_readout_clock_1(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setReadoutClockSpeed')
+    m = mocker.patch('_slsdet.DetectorApi.setReadoutClockSpeed')
     d.readout_clock = 'Half Speed'
     m.assert_called_once_with(1)
 
 def test_set_readout_clock_2(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setReadoutClockSpeed')
+    m = mocker.patch('_slsdet.DetectorApi.setReadoutClockSpeed')
     d.readout_clock = 'Quarter Speed'
     m.assert_called_once_with(2)
 
 def test_set_readout_clock_3(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setReadoutClockSpeed')
+    m = mocker.patch('_slsdet.DetectorApi.setReadoutClockSpeed')
     d.readout_clock = 'Super Slow Speed'
     m.assert_called_once_with(3)
 
 #----------------------------------------------------------------rx_datastream
 def test_get_rx_datastream(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getRxDataStreamStatus')
+    m = mocker.patch('_slsdet.DetectorApi.getRxDataStreamStatus')
     m.return_value = False
     assert d.rx_datastream == False
 
 def test_set_rx_datastream(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setRxDataStreamStatus')
+    m = mocker.patch('_slsdet.DetectorApi.setRxDataStreamStatus')
     d.rx_datastream = True
     m.assert_called_once_with(True)
 
 def test_get_rx_zmqip(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getNetworkParameter')
+    m = mocker.patch('_slsdet.DetectorApi.getNetworkParameter')
     d.rx_zmqip
     m.assert_called_once_with('rx_zmqip')
 
 def test_get_rx_zmqport_call(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getNetworkParameter')
+    m = mocker.patch('_slsdet.DetectorApi.getNetworkParameter')
     d.rx_zmqport
     m.assert_called_once_with('rx_zmqport')
 
 def test_get_rx_zmqport_decode(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getNetworkParameter')
+    m = mocker.patch('_slsdet.DetectorApi.getNetworkParameter')
     m.return_value = '30001+30003+'
     assert d.rx_zmqport == [30001, 30002, 30003, 30004]
 
 def test_get_rx_zmqport_empty(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getNetworkParameter')
+    m = mocker.patch('_slsdet.DetectorApi.getNetworkParameter')
     m.return_value = ''
     assert d.rx_zmqport == []
 
 
 #--------------------------------------------------------------------status
 def test_status_call(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getRunStatus')
+    m = mocker.patch('_slsdet.DetectorApi.getRunStatus')
     d.status
     m.assert_called_once_with()
 
 def test_start_acq_call(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.startAcquisition')
+    m = mocker.patch('_slsdet.DetectorApi.startAcquisition')
     d.start_acq()
     m.assert_called_once_with()
 
 def test_stop_acq_call(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.stopAcquisition')
+    m = mocker.patch('_slsdet.DetectorApi.stopAcquisition')
     d.stop_acq()
     m.assert_called_once_with()
 
 #--------------------------------------------------------------------subexptime
 def test_get_sub_exposure_time(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getSubExposureTime')
+    m = mocker.patch('_slsdet.DetectorApi.getSubExposureTime')
     m.return_value = 2370000
     assert d.sub_exposure_time == 0.00237
 
 
 def test_set_sub_exposure_time(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setSubExposureTime')
+    m = mocker.patch('_slsdet.DetectorApi.setSubExposureTime')
     d.sub_exposure_time = 0.002
     m.assert_called_once_with(2000000)
 
 def test_set_sub_exposure_time_raises_on_zero(d, mocker):
-    mocker.patch('_sls_detector.DetectorApi.setSubExposureTime')
+    mocker.patch('_slsdet.DetectorApi.setSubExposureTime')
     with pytest.raises(ValueError):
         d.sub_exposure_time = 0
 
 #------------------------------------------------------------------timing mode
 def test_get_timing_mode(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getTimingMode')
+    m = mocker.patch('_slsdet.DetectorApi.getTimingMode')
     d.timing_mode
     m.assert_called_once_with()
 
 def test_set_timing_mode(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setTimingMode')
+    m = mocker.patch('_slsdet.DetectorApi.setTimingMode')
     d.timing_mode = 'auto'
     m.assert_called_once_with('auto')
 
 #----------------------------------------------------------------vthreshold
 def test_get_vthreshold(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getDac')
+    m = mocker.patch('_slsdet.DetectorApi.getDac')
     d.vthreshold
     m.assert_called_once_with('vthreshold', -1)
 
 def test_set_vthreshold(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setDac')
+    m = mocker.patch('_slsdet.DetectorApi.setDac')
     d.vthreshold = 1675
     m.assert_called_once_with('vthreshold', -1, 1675)
 
 #----------------------------------------------------------------trimbits
 def test_get_trimbits(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.getAllTrimbits')
+    m = mocker.patch('_slsdet.DetectorApi.getAllTrimbits')
     d.trimbits
     m.assert_called_once_with()
 
 def test_set_trimbits(d, mocker):
-    m = mocker.patch('_sls_detector.DetectorApi.setAllTrimbits')
+    m = mocker.patch('_slsdet.DetectorApi.setAllTrimbits')
     d.trimbits = 15
     m.assert_called_once_with(15)
 
 def test_set_trimbits_raises_outside_range(d, mocker):
-    mocker.patch('_sls_detector.DetectorApi.setAllTrimbits')
+    mocker.patch('_slsdet.DetectorApi.setAllTrimbits')
 
     with pytest.raises(ValueError):
         d.trimbits = 69

python/unit-tests/detector_test.py

@@ -15,7 +15,7 @@ from pytest_mock import mocker
 import sys
 sys.path.append('/home/l_frojdh/slsdetectorgrup/sls_detector')
 
-import _sls_detector
+import _slsdet
 from sls_detector.errors import DetectorValueError, DetectorError
 from sls_detector.utils import all_equal, element_if_equal
 
@@ -47,7 +47,7 @@ def test_set_counters_single(d, mocker):
 
 
 # def test_busy_call(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getAcquiringFlag')
+#     m = mocker.patch('_slsdet.DetectorApi.getAcquiringFlag')
 #     m.return_value = False
 #     assert d.busy == False
 
@@ -73,34 +73,34 @@ def test_set_counters_single(d, mocker):
 #         d.detector_type = 'Eiger'
 
 # def test_det_type(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getDetectorType')
+#     m = mocker.patch('_slsdet.DetectorApi.getDetectorType')
 #     m.return_value = 'Eiger'
 #     assert d.detector_type == 'Eiger'
 
 
 # def test_get_exposure_time(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getExposureTime')
+#     m = mocker.patch('_slsdet.DetectorApi.getExposureTime')
 #     m.return_value = 100000000
 #     assert d.exposure_time == 0.1
 
 # def test_set_exposure_time(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setExposureTime')
+#     m = mocker.patch('_slsdet.DetectorApi.setExposureTime')
 #     d.exposure_time = 1.5
 #     m.assert_called_once_with(1500000000)
 
 # def test_set_exposure_time_less_than_zero(d, mocker):
-#     mocker.patch('_sls_detector.DetectorApi.setExposureTime')
+#     mocker.patch('_slsdet.DetectorApi.setExposureTime')
 #     with pytest.raises(DetectorValueError):
 #         d.exposure_time = -7
 
 
 # def test_get_file_index(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getFileIndex')
+#     m = mocker.patch('_slsdet.DetectorApi.getFileIndex')
 #     m.return_value = 8
 #     assert d.file_index == 8
 
 # def test_set_file_index(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setFileIndex')
+#     m = mocker.patch('_slsdet.DetectorApi.setFileIndex')
 #     d.file_index = 9
 #     m.assert_called_with(9)
 
@@ -112,28 +112,28 @@ def test_set_counters_single(d, mocker):
 #     assert d.dynamic_range == -100
 
 # def test_set_file_index_raises_on_neg(d, mocker):
-#     mocker.patch('_sls_detector.DetectorApi.setFileIndex')
+#     mocker.patch('_slsdet.DetectorApi.setFileIndex')
 #     with pytest.raises(ValueError):
 #         d.file_index = -9
 
 
 # def test_get_file_name(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getFileName')
+#     m = mocker.patch('_slsdet.DetectorApi.getFileName')
 #     d.file_name
 #     m.assert_called_once_with()
 
 # def test_set_file_name(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setFileName')
+#     m = mocker.patch('_slsdet.DetectorApi.setFileName')
 #     d.file_name = 'hej'
 #     m.assert_called_once_with('hej')
 
 # def test_get_file_path(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getFilePath')
+#     m = mocker.patch('_slsdet.DetectorApi.getFilePath')
 #     d.file_path
 #     m.assert_called_once_with()
 
 # def test_set_file_path_when_path_exists(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setFilePath')
+#     m = mocker.patch('_slsdet.DetectorApi.setFilePath')
 #     #To avoid raising an exception because path is not there
 #     mock_os = mocker.patch('os.path.exists')
 #     mock_os.return_value = True
@@ -141,25 +141,25 @@ def test_set_counters_single(d, mocker):
 #     m.assert_called_once_with('/path/to/something/')
 
 # def test_set_file_path_raises_when_not_exists(d, mocker):
-#     mocker.patch('_sls_detector.DetectorApi.setFilePath')
+#     mocker.patch('_slsdet.DetectorApi.setFilePath')
 #     mock_os = mocker.patch('os.path.exists')
 #     mock_os.return_value = False
 #     with pytest.raises(FileNotFoundError):
 #         d.file_path = '/path/to/something/'
 
 # def test_get_file_write(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getFileWrite')
+#     m = mocker.patch('_slsdet.DetectorApi.getFileWrite')
 #     m.return_value = False
 #     assert d.file_write == False
 
 # def test_set_file_write(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setFileWrite')
+#     m = mocker.patch('_slsdet.DetectorApi.setFileWrite')
 #     d.file_write = True
 #     m.assert_called_once_with(True)
 
 
 # def test_get_firmware_version(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getFirmwareVersion')
+#     m = mocker.patch('_slsdet.DetectorApi.getFirmwareVersion')
 #     m.return_value = 20
 #     assert d.firmware_version == 20
 
@@ -168,38 +168,38 @@ def test_set_counters_single(d, mocker):
 #         d.firmware_version = 20
 
 # def test_get_high_voltage_call_signature(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getDac')
+#     m = mocker.patch('_slsdet.DetectorApi.getDac')
 #     d.high_voltage
 #     m.assert_called_once_with('vhighvoltage', -1)
 
 # def test_get_high_voltage(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getDac')
+#     m = mocker.patch('_slsdet.DetectorApi.getDac')
 #     m.return_value = 80
 #     assert d.high_voltage == 80
 
 # #self._api.setDac('vhighvoltage', -1, voltage)
 # def test_set_high_voltage(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setDac')
+#     m = mocker.patch('_slsdet.DetectorApi.setDac')
 #     d.high_voltage = 80
 #     m.assert_called_once_with('vhighvoltage', -1, 80)
 
 # def test_decode_hostname_two_names(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getHostname')
+#     m = mocker.patch('_slsdet.DetectorApi.getHostname')
 #     m.return_value = 'beb059+beb048+'
 #     assert d.hostname == ['beb059', 'beb048']
 
 # def test_decode_hostname_four_names(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getHostname')
+#     m = mocker.patch('_slsdet.DetectorApi.getHostname')
 #     m.return_value = 'beb059+beb048+beb120+beb153+'
 #     assert d.hostname == ['beb059', 'beb048', 'beb120', 'beb153']
 
 # def test_decode_hostname_blank(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getHostname')
+#     m = mocker.patch('_slsdet.DetectorApi.getHostname')
 #     m.return_value = ''
 #     assert d.hostname == []
 
 # def test_get_image_size_gives_correct_size(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getImageSize')
+#     m = mocker.patch('_slsdet.DetectorApi.getImageSize')
 #     m.return_value = (512,1024)
 #     im_size = d.image_size
 #     assert im_size.rows == 512
@@ -208,7 +208,7 @@ def test_set_counters_single(d, mocker):
 
 
 # def test_load_config(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.readConfigurationFile')
+#     m = mocker.patch('_slsdet.DetectorApi.readConfigurationFile')
 #     #To avoid raising an exception because path is not there
 #     mock_os = mocker.patch('os.path.isfile')
 #     mock_os.return_value = True
@@ -216,14 +216,14 @@ def test_set_counters_single(d, mocker):
 #     m.assert_called_once_with('/path/to/my/file.config')
 
 # def test_load_config_raises_when_file_is_not_found(d, mocker):
-#     mocker.patch('_sls_detector.DetectorApi.readConfigurationFile')
+#     mocker.patch('_slsdet.DetectorApi.readConfigurationFile')
 #     mock_os = mocker.patch('os.path.isfile')
 #     mock_os.return_value = False
 #     with pytest.raises(FileNotFoundError):
 #         d.load_config('/path/to/my/file.config')
 
 # def test_load_parameters(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.readParametersFile')
+#     m = mocker.patch('_slsdet.DetectorApi.readParametersFile')
 #     #To avoid raising an exception because path is not there
 #     mock_os = mocker.patch('os.path.isfile')
 #     mock_os.return_value = True
@@ -231,7 +231,7 @@ def test_set_counters_single(d, mocker):
 #     m.assert_called_once_with('/path/to/my/file.par')
 
 # def test_load_parameters_raises_when_file_is_not_found(d, mocker):
-#     mocker.patch('_sls_detector.DetectorApi.readParametersFile')
+#     mocker.patch('_slsdet.DetectorApi.readParametersFile')
 #     mock_os = mocker.patch('os.path.isfile')
 #     mock_os.return_value = False
 #     with pytest.raises(FileNotFoundError):
@@ -239,14 +239,14 @@ def test_set_counters_single(d, mocker):
 
 # #getDetectorGeometry
 # def test_get_module_geometry_gives_correct_size(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getDetectorGeometry')
+#     m = mocker.patch('_slsdet.DetectorApi.getDetectorGeometry')
 #     m.return_value = (13,7)
 #     g = d.module_geometry
 #     assert g.vertical == 7
 #     assert g.horizontal == 13
 
 # def test_get_module_geometry_access(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getDetectorGeometry')
+#     m = mocker.patch('_slsdet.DetectorApi.getDetectorGeometry')
 #     m.return_value = (12,3)
 #     assert d.module_geometry[0] == 12
 #     assert d.module_geometry[1] == 3
@@ -259,12 +259,12 @@ def test_set_counters_single(d, mocker):
 #     assert t.vertical == 0
 
 # def test_get_n_frames(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getNumberOfFrames')
+#     m = mocker.patch('_slsdet.DetectorApi.getNumberOfFrames')
 #     m.return_value = 3
 #     assert d.n_frames == 3
 
 # def test_set_n_frames(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setNumberOfFrames')
+#     m = mocker.patch('_slsdet.DetectorApi.setNumberOfFrames')
 #     d.n_frames = 9
 #     m.assert_called_once_with(9)
 
@@ -272,12 +272,12 @@ def test_set_counters_single(d, mocker):
 #     assert d.n_frames == -100
 
 # def test_set_n_frames_raises_on_neg(d, mocker):
-#     mocker.patch('_sls_detector.DetectorApi.setNumberOfFrames')
+#     mocker.patch('_slsdet.DetectorApi.setNumberOfFrames')
 #     with pytest.raises(DetectorValueError):
 #         d.n_frames = -1
 
 # def test_set_n_frames_raises_on_zero(d, mocker):
-#     mocker.patch('_sls_detector.DetectorApi.setNumberOfFrames')
+#     mocker.patch('_slsdet.DetectorApi.setNumberOfFrames')
 #     with pytest.raises(DetectorValueError):
 #         d.n_frames = 0
 
@@ -285,12 +285,12 @@ def test_set_counters_single(d, mocker):
 #     assert d.n_cycles == -100
 
 # def test_set_n_cycles_raises_on_zero(d, mocker):
-#     mocker.patch('_sls_detector.DetectorApi.setCycles')
+#     mocker.patch('_slsdet.DetectorApi.setCycles')
 #     with pytest.raises(DetectorValueError):
 #         d.n_cycles = 0
 
 # def test_set_n_cycles(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setCycles')
+#     m = mocker.patch('_slsdet.DetectorApi.setCycles')
 #     d.n_cycles = 56
 #     m.assert_called_once_with(56)
 
@@ -300,12 +300,12 @@ def test_set_counters_single(d, mocker):
 #     assert d.n_measurements == -100
 
 # def test_set_n_measurements_raises_on_zero(d, mocker):
-#     mocker.patch('_sls_detector.DetectorApi.setNumberOfMeasurements')
+#     mocker.patch('_slsdet.DetectorApi.setNumberOfMeasurements')
 #     with pytest.raises(DetectorValueError):
 #         d.n_measurements = 0
 
 # def test_set_n_measurements(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setNumberOfMeasurements')
+#     m = mocker.patch('_slsdet.DetectorApi.setNumberOfMeasurements')
 #     d.n_measurements = 560
 #     m.assert_called_once_with(560)
 
@@ -313,33 +313,33 @@ def test_set_counters_single(d, mocker):
 #     assert d.n_modules == 0
 
 # def test_get_n_modules(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getNumberOfDetectors')
+#     m = mocker.patch('_slsdet.DetectorApi.getNumberOfDetectors')
 #     m.return_value = 12
 #     assert d.n_modules == 12
 
 # def test_get_period_time(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getPeriod')
+#     m = mocker.patch('_slsdet.DetectorApi.getPeriod')
 #     m.return_value = 130000000
 #     assert d.period == 0.13
 
 # def test_set_period_time(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setPeriod')
+#     m = mocker.patch('_slsdet.DetectorApi.setPeriod')
 #     d.period = 1.953
 #     m.assert_called_once_with(1953000000)
 
 # def test_set_period_time_less_than_zero(d, mocker):
-#     mocker.patch('_sls_detector.DetectorApi.setPeriod')
+#     mocker.patch('_slsdet.DetectorApi.setPeriod')
 #     with pytest.raises(ValueError):
 #         d.period = -7
 
 
 # def test_get_online(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getOnline')
+#     m = mocker.patch('_slsdet.DetectorApi.getOnline')
 #     d.online
 #     m.assert_called_once_with()
 
 # def test_set_online(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setOnline')
+#     m = mocker.patch('_slsdet.DetectorApi.setOnline')
 #     d.online = True
 #     m.assert_called_once_with(True)
 
@@ -347,116 +347,116 @@ def test_set_counters_single(d, mocker):
 #     assert d.last_client_ip == ''
 
 # def test_last_cliten_ip_call(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getLastClientIP')
+#     m = mocker.patch('_slsdet.DetectorApi.getLastClientIP')
 #     d.last_client_ip
 #     m.assert_called_once_with()
 
 # #-------------------------------------------------------------Rate correction
 # def test_get_rate_correction(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getRateCorrection')
+#     m = mocker.patch('_slsdet.DetectorApi.getRateCorrection')
 #     m.return_value = [132,129]
 #     assert d.rate_correction == [132,129]
 
 # def test_set_rate_correction(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setRateCorrection')
-#     mock_n = mocker.patch('_sls_detector.DetectorApi.getNumberOfDetectors')
+#     m = mocker.patch('_slsdet.DetectorApi.setRateCorrection')
+#     mock_n = mocker.patch('_slsdet.DetectorApi.getNumberOfDetectors')
 #     mock_n.return_value = 3
 #     d.rate_correction = [123,90,50]
 #     m.assert_called_once_with([123,90,50])
 
 # def test_set_rate_correction_raises_on_wrong_number_of_values(d, mocker):
-#     mocker.patch('_sls_detector.DetectorApi.setRateCorrection')
-#     mock_n = mocker.patch('_sls_detector.DetectorApi.getNumberOfDetectors')
+#     mocker.patch('_slsdet.DetectorApi.setRateCorrection')
+#     mock_n = mocker.patch('_slsdet.DetectorApi.getNumberOfDetectors')
 #     mock_n.return_value = 4
 #     with pytest.raises(ValueError):
 #         d.rate_correction = [123,90,50]
 
 # #----------------------------------------------------------------Readout clock
 # def test_get_readout_clock_0(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getReadoutClockSpeed')
+#     m = mocker.patch('_slsdet.DetectorApi.getReadoutClockSpeed')
 #     m.return_value = 0
 #     assert d.readout_clock == 'Full Speed'
 
 # def test_get_readout_clock_1(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getReadoutClockSpeed')
+#     m = mocker.patch('_slsdet.DetectorApi.getReadoutClockSpeed')
 #     m.return_value = 1
 #     assert d.readout_clock == 'Half Speed'
 
 # def test_get_readout_clock_2(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getReadoutClockSpeed')
+#     m = mocker.patch('_slsdet.DetectorApi.getReadoutClockSpeed')
 #     m.return_value = 2
 #     assert d.readout_clock == 'Quarter Speed'
 
 # def test_get_readout_clock_3(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getReadoutClockSpeed')
+#     m = mocker.patch('_slsdet.DetectorApi.getReadoutClockSpeed')
 #     m.return_value = 3
 #     assert d.readout_clock == 'Super Slow Speed'
 
 # def test_set_readout_clock_0(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setReadoutClockSpeed')
+#     m = mocker.patch('_slsdet.DetectorApi.setReadoutClockSpeed')
 #     d.readout_clock = 'Full Speed'
 #     m.assert_called_once_with(0)
 
 # def test_set_readout_clock_1(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setReadoutClockSpeed')
+#     m = mocker.patch('_slsdet.DetectorApi.setReadoutClockSpeed')
 #     d.readout_clock = 'Half Speed'
 #     m.assert_called_once_with(1)
 
 # def test_set_readout_clock_2(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setReadoutClockSpeed')
+#     m = mocker.patch('_slsdet.DetectorApi.setReadoutClockSpeed')
 #     d.readout_clock = 'Quarter Speed'
 #     m.assert_called_once_with(2)
 
 # def test_set_readout_clock_3(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setReadoutClockSpeed')
+#     m = mocker.patch('_slsdet.DetectorApi.setReadoutClockSpeed')
 #     d.readout_clock = 'Super Slow Speed'
 #     m.assert_called_once_with(3)
 
 # #----------------------------------------------------------------rx_datastream
 # def test_get_rx_datastream(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getRxDataStreamStatus')
+#     m = mocker.patch('_slsdet.DetectorApi.getRxDataStreamStatus')
 #     m.return_value = False
 #     assert d.rx_datastream == False
 
 # def test_set_rx_datastream(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setRxDataStreamStatus')
+#     m = mocker.patch('_slsdet.DetectorApi.setRxDataStreamStatus')
 #     d.rx_datastream = True
 #     m.assert_called_once_with(True)
 
 # def test_get_rx_zmqip(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getNetworkParameter')
+#     m = mocker.patch('_slsdet.DetectorApi.getNetworkParameter')
 #     d.rx_zmqip
 #     m.assert_called_once_with('rx_zmqip')
 
 # def test_get_rx_zmqport_call(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getNetworkParameter')
+#     m = mocker.patch('_slsdet.DetectorApi.getNetworkParameter')
 #     d.rx_zmqport
 #     m.assert_called_once_with('rx_zmqport')
 
 # def test_get_rx_zmqport_decode(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getNetworkParameter')
+#     m = mocker.patch('_slsdet.DetectorApi.getNetworkParameter')
 #     m.return_value = ['30001', '30003']
 #     assert d.rx_zmqport == [30001, 30003]
 
 # def test_get_rx_zmqport_empty(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getNetworkParameter')
+#     m = mocker.patch('_slsdet.DetectorApi.getNetworkParameter')
 #     m.return_value = ''
 #     assert d.rx_zmqport == []
 
 
 # #--------------------------------------------------------------------status
 # def test_status_call(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getRunStatus')
+#     m = mocker.patch('_slsdet.DetectorApi.getRunStatus')
 #     d.status
 #     m.assert_called_once_with()
 
 # def test_start_detecor(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.startAcquisition')
+#     m = mocker.patch('_slsdet.DetectorApi.startAcquisition')
 #     d.start_detector()
 #     m.assert_called_once_with()
 
 # def test_stop_acq_call(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.stopAcquisition')
+#     m = mocker.patch('_slsdet.DetectorApi.stopAcquisition')
 #     d.stop_detector()
 #     m.assert_called_once_with()
 
@@ -464,23 +464,23 @@ def test_set_counters_single(d, mocker):
 
 # #------------------------------------------------------------------timing mode
 # def test_get_timing_mode(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getTimingMode')
+#     m = mocker.patch('_slsdet.DetectorApi.getTimingMode')
 #     d.timing_mode
 #     m.assert_called_once_with()
 
 # def test_set_timing_mode(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setTimingMode')
+#     m = mocker.patch('_slsdet.DetectorApi.setTimingMode')
 #     d.timing_mode = 'auto'
 #     m.assert_called_once_with('auto')
 
 # #----------------------------------------------------------------vthreshold
 # def test_get_vthreshold(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.getDac')
+#     m = mocker.patch('_slsdet.DetectorApi.getDac')
 #     d.vthreshold
 #     m.assert_called_once_with('vthreshold', -1)
 
 # def test_set_vthreshold(d, mocker):
-#     m = mocker.patch('_sls_detector.DetectorApi.setDac')
+#     m = mocker.patch('_slsdet.DetectorApi.setDac')
 #     d.vthreshold = 1675
 #     m.assert_called_once_with('vthreshold', -1, 1675)
 

sample/CMakeLists.txt

@@ -1,21 +1,35 @@
-add_executable(a api.cpp)
-target_link_libraries(a 
-    slsDetectorShared
+add_executable(using_logger using_logger.cpp)
+target_link_libraries(using_logger 
     slsSupportLib
     pthread
     rt
 )  
 
-set_target_properties(a PROPERTIES
+set_target_properties(using_logger PROPERTIES
     RUNTIME_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/bin
 )
 
 
-add_executable(result useResult.cpp)
-target_link_libraries(result 
-    slsDetectorShared
-)  
+# add_executable(result useResult.cpp)
+# target_link_libraries(result 
+#     slsDetectorShared
+# )  
+
+# set_target_properties(result PROPERTIES
+#     RUNTIME_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/bin
+# )
+
+# add_executable(udp udp.cpp)
+# target_link_libraries(udp 
+#     slsDetectorShared
+#     slsSupportLib
+#     pthread
+#     rt
+#     fmt
+# )  
+
+# set_target_properties(udp PROPERTIES
+#     RUNTIME_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/bin
+# )
+
 
-set_target_properties(result PROPERTIES
-    RUNTIME_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/bin
-)

sample/udp.cpp

@@ -0,0 +1,65 @@
+#include "UdpRxSocket.h"
+#include "sls_detector_defs.h"
+#include <chrono>
+#include <fmt/format.h>
+#include <iostream>
+#include <thread>
+#include "network_utils.h"
+
+// Assume packages arrive in order
+
+// Assume frame nr starts from 0
+
+using header_t = slsDetectorDefs::sls_detector_header;
+
+int main() {
+    fmt::print("Hej!\n");
+
+
+    constexpr ssize_t packet_size = 4144;
+    constexpr ssize_t payload_size = packet_size - sizeof(header_t);
+    int port = 50012;
+
+    char * buffer = new char[packet_size];
+
+    sls::UdpRxSocket s(port, packet_size, "10.1.1.107");
+    int n = 0;
+    while(true){
+        // s.ReceiveDataOnly(buffer);
+        if (s.ReceivePacket())
+            std::cout << n++ << std::endl;
+    }
+
+    // auto header = reinterpret_cast<header_t *>(s.buffer());
+    // char *data = s.buffer() + sizeof(header_t);
+    // fmt::print("buffer start: {}\nheader: {}\ndata: {}\n", fmt::ptr(s.buffer()),
+    //            fmt::ptr(header), fmt::ptr(data));
+
+    // int n = 0;
+
+    // fmt::print("Buffer size: {}\n", s.buffer_size());
+    // std::vector<uint16_t> image(n_pixels);
+    // char *image_data = (char *)image.data();
+    // uint64_t frame_nr = 0;
+    // while (true) {
+
+    //     if (s.ReceivePacket()) {
+
+    //         // fmt::print("frame: {} pkt: {} dst: {}\n", header->frameNumber,
+    //         // header->packetNumber, header->packetNumber*payload_size);
+    //         if (header->frameNumber != frame_nr) {
+    //             // dispatch frame
+    //             fmt::print("frame {} done! got: {} pkgs\n", frame_nr, n);
+    //             frame_nr = header->frameNumber;
+    //             n = 0;
+    //             std::this_thread::sleep_for(std::chrono::milliseconds(1));
+    //         }
+    //         ++n;
+    //         memcpy(image_data + header->packetNumber * payload_size, data,
+    //                payload_size);
+
+    //     } else {
+    //         std::cout << "timeout\n";
+    //     }
+    // }
+}

sample/using_logger.cpp

@@ -0,0 +1,42 @@
+#include "logger.h"
+#include <iostream>
+#include <chrono>
+int main() {
+
+    //compare old and new
+    std::cout << "Compare output between old and new:\n";
+    LOG(logINFO) << "Some info message";
+    LOG(logERROR) << "This is an error";
+    LOG(logWARNING) << "While this is only a warning";
+
+    //Logging level can be configure at runtime
+    std::cout << "\n\n";
+    std::cout << "The default macro controlled level is: "
+              << sls::Logger::ToString(LOG_MAX_REPORTING_LEVEL) << '\n';
+    
+    sls::Logger::ReportingLevel() = logERROR;
+    LOG(logINFO) << "Now this is not written";
+    LOG(logWARNING) << "and also not this";
+
+    sls::Logger::ReportingLevel() = logINFO;
+    LOG(logINFO) << "But now we can see it";
+
+
+    //The output can be redirected to another buffer 
+    std::ostringstream local;
+    auto clog_buff = std::clog.rdbuf();
+    std::clog.rdbuf(local.rdbuf());
+
+    LOG(logINFOBLUE) << "A message";
+    LOG(logWARNING) << "And another one";
+
+    std::clog.rdbuf(clog_buff); // restore
+
+    std::cout << "local buf:\n" << local.str(); 
+
+    LOG(logINFO) << "After reset we should print directly";
+    LOG(logINFOBLUE) << "some infoBLUE text";
+    LOG(logINFOGREEN) << "some infoGREEN text";
+    LOG(logINFORED) << "some infoRED text";
+
+}

slsDetectorCalibration/analogDetector.h

@@ -423,7 +423,7 @@ template <class dataType> class analogDetector {
 	  if (g==0) g=-1.;
 	}
       
-	return stat[iy][ix].getPedestalRMS()/g;//divide by gain?
+	return stat[iy][ix].getPedestalRMS();//divide by gain?
       }
       return -1;
     };

slsDetectorCalibration/dataStructures/deserializer.h

@@ -1,6 +1,7 @@
 #ifndef DESERIALIZER_H
 #define DESERIALIZER_H
 #include <vector>
+#include "slsDetectorData.h"
 
 class deserializer : public slsDetectorData<int> {
 
@@ -52,7 +53,13 @@ class deserializer : public slsDetectorData<int> {
  static int* deserializeAll(char *ptr, std::vector <int> dbl, int dr=24,  int nch=64*3, int off=5) {
    // off=0;
    //int iarg;
-   int64_t word, *wp;
+
+
+    cout <<"** deserializer: " << endl;
+    cout << "** Number of chans:\t" << nch << endl;
+    cout << "** Serial Offset:\t" << off << endl;
+    cout << "** Dynamic range:\t" << dr << endl;
+    int64_t word, *wp, ww,one=1, bit ;
    int* val=new int[nch];
    int ioff=0;
    int idr=0;
@@ -67,38 +74,61 @@ class deserializer : public slsDetectorData<int> {
    }
    wp=(int64_t*)ptr;
 
-   for (iw=0; iw<nch/nb; iw) {
+   int nw=nch/nb;
+
+   cout << "** Number of bits:\t" << nb << endl;
+   cout << "** Samples:\t" << nw << endl;
+    
+  for (ib=0; ib<nb; ib++) {
+    cout << dbl[ib] << " " ;
+  }
+  cout << endl;
+   
+  for (ib=0; ib<nch; ib++) {
+    val[ib]=0;
+  }
+   
+   for (iw=0; iw<nw; iw) {
      word=*wp;;
      if (ioff<off) {
        ioff++;
        // cout <<"*";
      }  else {
        //if (idr<16) {
-       ib=0;
-	for (const auto &bit : dbl) {
-	  ich=iw+nch/nb*(ib);
-	  if (word&(1<<bit) && ich<nch)  {
+       //ib=0; 
+       // cout << hex << "*************" << word << endl;
+      for (ib=0; ib<nb; ib++) {
+	//	for (const auto &bit : dbl) {
+	  ich=iw+nch*ib/nb;
+	  /* if (ich>1060) */
+	  /* cout << iw << " " << idr << " " << ib << " " << bit << " " << ich << " " << val[ich] << " **  " ; */ 
+	  bit=dbl[ib];
+	  ww=one<<bit;
+	  if (word&(ww) && ich<nch)  {
 	    //cout << "+" ;
 	    val[ich]|=(1<<idr);
-	  }  //else { 
+	  }
+	  /* if (ich>1060) */
+	  /*   cout << val[ich]  << " " << hex << word << " " << ww << " " << (word&(ww)) << dec <<endl; */
+	  /* //else {  */
 	  //cout << "-" ; 
 	  //}
-	  ib++;
-	}
-	
+	  //ib++;
 	}
 	
       idr++; 
+     }
+     
      if (idr==dr) {
        idr=0;
 	//  cout << dec << " " << iw << " " << val[iw] << " " << val[iw+nch/2] << endl;
-       cout <<dec << iw<<endl;
+       // cout <<dec << iw<<endl;
        iw++;
      }//end if()
      
       //end else()
      wp+=1;
-     ii++;
+     // ii++;
    }//end for
    
     
@@ -117,7 +147,7 @@ class deserializer : public slsDetectorData<int> {
    int ii=0;
    int ich;
    int nb=dbl.size();
-
+   int bit;
    char *dval;
 
    idr=0;
@@ -128,7 +158,12 @@ class deserializer : public slsDetectorData<int> {
    
    ib=0;
    ich=0; 
-   for (const auto &bit : dbl) {
+     for (ib=0; ib<nb; ib++) {
+       //	for (const auto &bit : dbl) {
+
+       /* if (ich>1060) */
+       /* cout << iw << " " << idr << " " << ib << " " << bit << " " << ich << " " << val[ich] << " **  " ; */ 
+       bit=dbl[ib];
      //ioff=off;
      idr=0;
      for (iw=0; iw<(nch*dr/nb)/8; iw++) {
@@ -141,7 +176,7 @@ class deserializer : public slsDetectorData<int> {
        }	
      }
      ii++;
-     ib++;
+     // ib++;
    }//end for
    
     

slsDetectorCalibration/dataStructures/imageZmq16bit.h

@@ -0,0 +1,125 @@
+#ifndef IMAGEZMQ16BIT_H
+#define  IMAGEZMQ16BIT_H
+#include "slsDetectorData.h"
+
+
+class imageZmq16bit : public slsDetectorData<uint16_t> {
+ 
+ private:
+  
+  // int iframe;
+ public:
+
+
+
+
+  /**
+     Implements the slsReceiverData structure for the moench02 prototype read out by a module i.e. using the slsReceiver
+     (160x160 pixels, 40 packets 1286 large etc.)
+     \param c crosstalk parameter for the output buffer
+
+  */
+  // moench03T1ZmqDataNew(int ns=5000): slsDetectorData<uint16_t>(400, 400, ns*32*2+sizeof(int)), nSamples(ns), offset(sizeof(int)), xtalk(0.00021) {
+ imageZmq16bit(int nnx=400, int nny=400): slsDetectorData<uint16_t>(nnx, nny, 2*nnx*nny) {
+    cout << "* " << nx << " " << ny << endl;
+    int is=0;
+    for (int row=0; row<ny; row++){
+      for(int col=0;col<nx;col++){
+	dataMap[row][col]=is*2;
+	is++;  
+      }
+    }
+ 
+
+  };
+
+  virtual double getValue(char *data, int ix, int iy=0) {
+   
+    cout << ix << " " << ix <<  dataMap[iy][ix] << 2*nx*ny << " "<< endl;
+    uint16_t val=getChannel(data, ix, iy)&0x3fff;
+    return val;
+  };
+
+
+  int getFrameNumber(char *buff){return *((int*)buff);};//*((int*)(buff+5))&0xffffff;};   
+
+ 
+  int getPacketNumber(char *buff){return 0;}//((*(((int*)(buff+4))))&0xff)+1;};   
+
+  virtual char *readNextFrame(ifstream &filebin) {
+    int ff=-1, np=-1;
+    return readNextFrame(filebin, ff, np);
+  };
+
+  virtual char *readNextFrame(ifstream &filebin, int &ff) {
+    int np=-1;
+    return readNextFrame(filebin, ff, np);
+  };
+
+  virtual char *readNextFrame(ifstream &filebin, int& ff, int &np) {
+	  char *data=new char[2*nx*ny];
+	  char *d=readNextFrame(filebin, ff, np, data);
+	  if (d==NULL) {delete [] data; data=NULL;}
+	  return data;
+  }
+
+
+
+
+  virtual char *readNextFrame(ifstream &filebin, int& ff, int &np, char *data) {
+    //char *retval=0;
+    //	  int  nd;
+    //int fnum = -1;
+	  np=0;
+	  //	  int  pn;
+	  
+
+	  //  if (ff>=0)
+	  //  fnum=ff;
+
+	  if (filebin.is_open()) {
+	    if (filebin.read(data, 2*nx*ny) ){
+	      // iframe++;
+	      //ff=iframe;
+	      return data;
+	    }
+	  }
+	    return NULL;
+	    
+	    
+	  
+  };
+
+
+
+  virtual  char *findNextFrame(char *data, int &ndata, int dsize){
+    if (dsize<2*nx*ny) ndata=dsize;
+    else ndata=2*nx*ny;
+    return data;
+
+  }
+  
+
+
+
+
+
+  // virtual int setFrameNumber(int ff){iframe=ff};
+
+
+
+
+
+
+
+
+
+
+int getPacketNumber(int x, int y) {return 0;};
+
+};
+
+
+
+
+#endif

slsDetectorCalibration/dataStructures/imageZmq32bit.h

@@ -0,0 +1,125 @@
+#ifndef IMAGEZMQ32BIT_H
+#define  IMAGEZMQ32BIT_H
+#include "slsDetectorData.h"
+
+
+class imageZmq32bit : public slsDetectorData<uint16_t> {
+ 
+ private:
+  
+  // int iframe;
+ public:
+
+
+
+
+  /**
+     Implements the slsReceiverData structure for the moench02 prototype read out by a module i.e. using the slsReceiver
+     (160x160 pixels, 40 packets 1286 large etc.)
+     \param c crosstalk parameter for the output buffer
+
+  */
+  // moench03T1ZmqDataNew(int ns=5000): slsDetectorData<uint16_t>(400, 400, ns*32*2+sizeof(int)), nSamples(ns), offset(sizeof(int)), xtalk(0.00021) {
+ imageZmq32bit(int nnx=400, int nny=400): slsDetectorData<uint16_t>(nnx, nny, sizeof(uint32_t)*nnx*nny) {
+    cout << "* " << nx << " " << ny << endl;
+    int is=0;
+    for (int row=0; row<ny; row++){
+      for(int col=0;col<nx;col++){
+	dataMap[row][col]=is*sizeof(uint32_t);
+	is++;  
+      }
+    }
+ 
+
+  };
+
+  /* virtual double getValue(char *data, int ix, int iy=0) { */
+   
+  /*   //cout << ix << " " << ix <<  dataMap[iy][ix] << 2*nx*ny << " "<< endl; */
+  /*   uint16_t val=getChannel(data, ix, iy); */
+  /*   return val; */
+  /* }; */
+
+
+  int getFrameNumber(char *buff){return *((int*)buff);};//*((int*)(buff+5))&0xffffff;};   
+
+ 
+  int getPacketNumber(char *buff){return 0;}//((*(((int*)(buff+4))))&0xff)+1;};   
+
+  virtual char *readNextFrame(ifstream &filebin) {
+    int ff=-1, np=-1;
+    return readNextFrame(filebin, ff, np);
+  };
+
+  virtual char *readNextFrame(ifstream &filebin, int &ff) {
+    int np=-1;
+    return readNextFrame(filebin, ff, np);
+  };
+
+  virtual char *readNextFrame(ifstream &filebin, int& ff, int &np) {
+	  char *data=new char[2*nx*ny];
+	  char *d=readNextFrame(filebin, ff, np, data);
+	  if (d==NULL) {delete [] data; data=NULL;}
+	  return data;
+  }
+
+
+
+
+  virtual char *readNextFrame(ifstream &filebin, int& ff, int &np, char *data) {
+    //char *retval=0;
+    //	  int  nd;
+    //int fnum = -1;
+	  np=0;
+	  //	  int  pn;
+	  
+
+	  //  if (ff>=0)
+	  //  fnum=ff;
+
+	  if (filebin.is_open()) {
+	    if (filebin.read(data, 2*nx*ny) ){
+	      // iframe++;
+	      //ff=iframe;
+	      return data;
+	    }
+	  }
+	    return NULL;
+	    
+	    
+	  
+  };
+
+
+
+  virtual  char *findNextFrame(char *data, int &ndata, int dsize){
+    if (dsize<2*nx*ny) ndata=dsize;
+    else ndata=2*nx*ny;
+    return data;
+
+  }
+  
+
+
+
+
+
+  // virtual int setFrameNumber(int ff){iframe=ff};
+
+
+
+
+
+
+
+
+
+
+int getPacketNumber(int x, int y) {return 0;};
+
+};
+
+
+
+
+#endif

slsDetectorCalibration/dataStructures/moench03T1ZmqDataNew.h

@@ -28,7 +28,8 @@ class moench03T1ZmqDataNew : public slsDetectorData<uint16_t> {
      \param c crosstalk parameter for the output buffer
 
   */
- moench03T1ZmqDataNew(int ns=5000): slsDetectorData<uint16_t>(400, 400, ns*32*2+sizeof(int)), nSamples(ns), offset(sizeof(int)), xtalk(0.00021) {
+  // moench03T1ZmqDataNew(int ns=5000): slsDetectorData<uint16_t>(400, 400, ns*32*2+sizeof(int)), nSamples(ns), offset(sizeof(int)), xtalk(0.00021) {
+ moench03T1ZmqDataNew(int ns=5000, int oo=0): slsDetectorData<uint16_t>(400, 400, ns*32*2+oo), nSamples(ns), offset(oo), xtalk(0.00021) {
 
     int nadc=32;
     int sc_width=25;
@@ -137,6 +138,7 @@ class moench03T1ZmqDataNew : public slsDetectorData<uint16_t> {
     /* vout+=0.0008*val-6224; */
     /* return vout; //(double)getChannel(data, ix, iy);
      */
+    // cout << ix << " "<< iy << " " << dataMap[iy][ix] << endl;
     return ((double)getChannel(data, ix, iy))+xtalk*getGhost(iy,iy);
   };
 

slsDetectorCalibration/moenchExecutables/Makefile.zmq

@@ -1,15 +1,19 @@
 
-INCDIR=   -I. -I../dataStructures ../tiffIO.cpp -I../ -I../interpolations/ -I../../slsSupportLib/include/ -I../../slsReceiverSoftware/include/
+INCDIR=   -I. -I../dataStructures ../tiffIO.cpp -I../ -I../interpolations/ -I../../slsSupportLib/include/ -I../../slsReceiverSoftware/include/ -I../../libs/rapidjson/
 LDFLAG= -L/usr/lib64/ -lpthread -lm  -lstdc++  -lzmq -pthread -lrt -ltiff   -O3 -g -std=c++11 -Wall
 #-L../../bin -lhdf5  -L.
 
 #DESTDIR?=../bin
 
-all:  moenchZmqProcess
+all:  moenchZmqProcess moenchZmqProcessCtbGui
+
 
 moenchZmqProcess:  moenchZmqProcess.cpp   clean
 		      g++ -o moenchZmqProcess  moenchZmqProcess.cpp  $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF)  -DNEWZMQ -DINTERP
 
+moenchZmqProcessCtbGui:  moenchZmqProcess.cpp   clean
+		      g++ -o moenchZmqProcessCtbGui  moenchZmqProcess.cpp  $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF)  -DNEWZMQ -DINTERP -DCTBGUI
+
 clean: 	
 	rm -f  moenchZmqProcess  
 

slsDetectorCalibration/moenchExecutables/moenchPhotonCounter.cpp

@@ -149,6 +149,7 @@ int main(int argc, char *argv[]) {
   if (argc>=9) {
     nframes=atoi(argv[8]);
   }
+
   int xmin=0, xmax=nx, ymin=0, ymax=ny;
   if (argc>=13) {
     xmin=atoi(argv[9]);
@@ -185,6 +186,7 @@ int main(int argc, char *argv[]) {
     cout << "pedestal file is " << pedfile << endl;
  if (thr>0) 
     cout << "threshold is " << thr << endl;
+ cout << "Nframes is " << nframes << endl;
  
  uint32 nnx, nny;
  double *gmap;

slsDetectorCalibration/moenchExecutables/moenchZmqProcess.cpp

@@ -74,6 +74,14 @@ int main(int argc, char *argv[]) {
   // high_resolution_clock::time_point t1;
   // high_resolution_clock::time_point t2 ;
   time_t begin,end,finished;
+  int rms=0;
+
+  int nped=1000, nped0=100;
+
+#ifdef PTC
+  nped=10000;
+  nped0=10000;
+#endif
 
 
   if (argc > 4) {
@@ -111,7 +119,7 @@ int main(int argc, char *argv[]) {
   }
 
   //slsDetectorData *det=new moench03T1ZmqDataNew(); 
-  moench03T1ZmqDataNew *det=new moench03T1ZmqDataNew(); 
+  moench03T1ZmqDataNew *det=new moench03T1ZmqDataNew(5000,sizeof(int)); 
   cout << endl << " det" <<endl;
   int npx, npy;
   det->getDetectorSize(npx, npy);
@@ -129,8 +137,15 @@ int main(int argc, char *argv[]) {
 
   int ncol_cm=CM_ROWS;
   double xt_ghost=C_GHOST;
-  moench03CommonMode *cm=new moench03CommonMode(ncol_cm);
-  moench03GhostSummation *gs=new moench03GhostSummation(det, xt_ghost);
+
+
+  moench03CommonMode *cm=NULL;
+  moench03GhostSummation *gs=NULL;
+#ifdef CORR
+  cm=new moench03CommonMode(ncol_cm);
+  gs=new moench03GhostSummation(det, xt_ghost);
+#endif
+
   double *gainmap=NULL;
   float *gm;
   double *gmap=NULL;
@@ -158,7 +173,7 @@ int main(int argc, char *argv[]) {
 
   //analogDetector<uint16_t> *filter=new analogDetector<uint16_t>(det,1,NULL,1000);
 #ifndef INTERP
-  singlePhotonDetector *filter=new singlePhotonDetector(det,3, nSigma, 1, cm, 1000, 10, -1, -1, gainmap, gs);
+  singlePhotonDetector *filter=new singlePhotonDetector(det,3, nSigma, 1, cm, nped, nped0, -1, -1, gainmap, gs);
 
     multiThreadedCountingDetector *mt=new multiThreadedCountingDetector(filter,nthreads,fifosize);
 
@@ -169,7 +184,7 @@ int main(int argc, char *argv[]) {
 
   if (etafname) interp->readFlatField(etafname);
 
-  interpolatingDetector *filter=new interpolatingDetector(det,interp, nSigma, 1, cm,  1000, 10, -1, -1, gainmap, gs);
+  interpolatingDetector *filter=new interpolatingDetector(det,interp, nSigma, 1, cm,  nped, nped0, -1, -1, gainmap, gs);
   multiThreadedInterpolatingDetector *mt=new multiThreadedInterpolatingDetector(filter,nthreads,fifosize);
 #endif
 
@@ -293,7 +308,8 @@ int main(int argc, char *argv[]) {
 	uint8_t detType = 0;
 	uint8_t version = 0;
 	//	int* flippedData = 0;
-	char* additionalJsonHeader = 0;
+	string* additionalJsonHeader = 0;
+	//char* additionalJsonHeader = 0;
 
 	int32_t threshold=0;
 	
@@ -356,6 +372,11 @@ int main(int argc, char *argv[]) {
 	      sprintf(ofname,"%s_%ld_ped.tiff",fname,fileindex);
 	      mt->writePedestal(ofname);
 	       cout << "Writing pedestal to " << ofname << endl;
+	       if (rms) {
+	      sprintf(ofname,"%s_%ld_var.tiff",fname,fileindex);
+	      mt->writePedestalRMS(ofname);
+	       cout << "Writing pedestal variance to " << ofname << endl;
+	       }
 	    }
 #ifdef INTERP
 	    else if  (fMode==eFlat) {
@@ -388,7 +409,7 @@ int main(int argc, char *argv[]) {
 	
 		  dout[ix]=ped[ix];
 		  // if (ix<100*400)
-		  //   cout << ix << " " << ped[ix] << endl;
+		  // cout << ix << " " << ped[ix] << " "<< dout[ix] << endl;
 	      }
 	      
 	    }
@@ -448,43 +469,20 @@ int main(int argc, char *argv[]) {
 
 	    //  cout << "Sending image size " << nnx << " " << nny << endl;
 
-#ifndef DEVELOPER
-#ifndef MOENCH_BRANCH
-	    zmqsocket2->SendHeaderData (0, false, SLS_DETECTOR_JSON_HEADER_VERSION, dr, fileindex, 0,0, nnx, nny, nnx*nny*dr/8,acqIndex, frameIndex, fname, acqIndex,0 , packetNumber,bunchId, timestamp, modId, xCoord, yCoord, zCoord,debug, roundRNumber, detType, version, 0,0, additionalJsonHeader);
-#endif
-#endif
-
-#ifdef DEVELOPER
-	    zmqsocket2->SendHeaderData (0, false,SLS_DETECTOR_JSON_HEADER_VERSION , dr, fileindex, 0,0,nnx,nny,nnx*nny*dr/8,acqIndex, frameIndex, fname,acqIndex,0 , packetNumber,bunchId, timestamp, modId,xCoord, yCoord, zCoord,debug, roundRNumber, detType, version, 0,0, 0,additionalJsonHeader);
-#endif	
-#ifdef MOENCH_BRANCH
-	    /*
- int SendHeaderData ( int index, bool dummy, uint32_t jsonversion, uint32_t dynamicrange = 0, uint64_t fileIndex = 0,
-                        uint32_t npixelsx = 0, uint32_t npixelsy = 0, uint32_t imageSize = 0,
-                        uint64_t acqIndex = 0, uint64_t fIndex = 0, char* fname = NULL,
-                        uint64_t frameNumber = 0, uint32_t expLength = 0, uint32_t packetNumber = 0,
-                        uint64_t bunchId = 0, uint64_t timestamp = 0,
-                        uint16_t modId = 0, uint16_t row = 0, uint16_t column = 0, uint16_t reserved = 0,
-                        uint32_t debug = 0, uint16_t roundRNumber = 0,
-                        uint8_t detType = 0, uint8_t version = 0, int* flippedData = 0,
-                        char* additionalJsonHeader = 0) {
-int ZmqSocket::SendHeaderData(int 0, bool false, uint32_t SLS_DETECTOR_JSON_HEADER_VERSION , uint32_t dr, uint64_t fileindex, uint32_t 0, uint32_t 0, uint32_t, uint64_t, uint64_t, char*, uint64_t, uint32_t, uint32_t, uint64_t, uint64_t, uint16_t, uint16_t, uint16_t, uint16_t, uint32_t, uint16_t, uint8_t, uint8_t, int*, char*)
-
-	     */
-	    //zmqsocket2->SendHeaderData (0, false,SLS_DETECTOR_JSON_HEADER_VERSION , dr, fileindex, 0,0,nnx,nny,nnx*nny*dr/8,acqIndex, frameIndex, fname,acqIndex,0 , packetNumber,bunchId, timestamp, modId,xCoord, yCoord, zCoord,debug, roundRNumber, detType, version);//, 0,additionalJsonHeader);
-	    zmqsocket2->SendHeaderData (0, false, SLS_DETECTOR_JSON_HEADER_VERSION, dr, fileindex, nnx, nny, nnx*nny*dr/8,acqIndex, frameIndex, fname, acqIndex, subFrameIndex, packetNumber,bunchId, timestamp, modId, xCoord, yCoord, zCoord,debug, roundRNumber, detType, version, flippedData, additionalJsonHeader);
-
-	    /* old 
-	       zmqsocket2->SendHeaderData (0, false, SLS_DETECTOR_JSON_HEADER_VERSION, dr, fileindex, nnx, nny, nnx*nny*dr/8,acqIndex, frameIndex, fname, acqIndex, subFrameIndex, packetNumber,bunchId, timestamp, modId, xCoord, yCoord, zCoord,debug, roundRNumber, detType, version, flippedData, additionalJsonHeader);
-	    */
-	    /*
+// #ifndef DEVELOPER
+// #ifndef MOENCH_BRANCH
+// 	    zmqsocket2->SendHeaderData (0, false, SLS_DETECTOR_JSON_HEADER_VERSION, dr, fileindex, 1,1, nnx, nny, nnx*nny*dr/8,acqIndex, frameIndex, fname, acqIndex,0 , packetNumber,bunchId, timestamp, modId, xCoord, yCoord, zCoord,debug, roundRNumber, detType, version, 0,0, additionalJsonHeader);
+// #endif
+// #endif
 
 
-	      new
-	      zmqsocket2->SendHeaderData (0, false,SLS_DETECTOR_JSON_HEADER_VERSION , dr, fileindex, 0,0,nnx,nny,nnx*nny*dr/8,acqIndex, frameIndex, fname,acqIndex,0 , packetNumber,bunchId, timestamp, modId,xCoord, yCoord, zCoord,debug, roundRNumber, detType, version, 0,additionalJsonHeader);
-	     */
-#endif		
-	       
+// #ifdef DEVELOPER
+// #ifdef CTBGUI
+//  	    zmqsocket2->SendHeaderData (0, false,SLS_DETECTOR_JSON_HEADER_VERSION , dr, fileindex, 0,0,nnx,nny,nnx*nny*dr/8,acqIndex, frameIndex, fname,acqIndex,0 , packetNumber,bunchId, timestamp, modId,xCoord, yCoord, zCoord,debug, roundRNumber, detType, version, 0,0, 0,additionalJsonHeader);
+// #endif
+// #ifndef CTBGUI
+ 	    zmqsocket2->SendHeaderData (0, false,SLS_DETECTOR_JSON_HEADER_VERSION , dr, fileindex, 1,1,nnx,nny,nnx*nny*dr/8,acqIndex, frameIndex, fname,acqIndex,0 , packetNumber,bunchId, timestamp, modId,xCoord, yCoord, zCoord,debug, roundRNumber, detType, version, 0,0, 0,additionalJsonHeader);
+	    //#endif
 		
 
 		zmqsocket2->SendData((char*)dout,nnx*nny*dr/8);
@@ -577,6 +575,7 @@ int ZmqSocket::SendHeaderData(int 0, bool false, uint32_t SLS_DETECTOR_JSON_HEAD
 	      /* Analog detector commands */
 	      //isPedestal=0;
 	      //isFlat=0;
+	      rms=0;
 	      fMode=eFrame;
 	      frameMode_s="frame";
 	      cprintf(MAGENTA, "Frame mode: ");
@@ -586,11 +585,17 @@ int ZmqSocket::SendHeaderData(int 0, bool false, uint32_t SLS_DETECTOR_JSON_HEAD
 		  if (frameMode_s == "pedestal"){
 		    fMode=ePedestal;
 		    //isPedestal=1;
-		  } else if (frameMode_s == "newPedestal"){
+		  } else if (frameMode_s == "newpedestal"){
 		    mt->newDataSet(); //resets pedestal  
 		    // cprintf(MAGENTA, "Resetting pedestal\n");
 		    fMode=ePedestal;
 		    //isPedestal=1;
+		  } else if (frameMode_s == "variance"){
+		    mt->newDataSet(); //resets pedestal  
+		    // cprintf(MAGENTA, "Resetting pedestal\n");
+		    fMode=ePedestal;
+		    rms=1;
+		    //isPedestal=1;
 		  }
 #ifdef INTERP 
 		  else if (frameMode_s == "flatfield") {
@@ -611,11 +616,13 @@ int ZmqSocket::SendHeaderData(int 0, bool false, uint32_t SLS_DETECTOR_JSON_HEAD
 		    frameMode_s="frame";
 		  }
 		}
-	      }
 		cprintf(MAGENTA, "%s\n" , frameMode_s.c_str());
+	      } else
+		cprintf(RED, "%s\n" , frameMode_s.c_str());
+
 	      mt->setFrameMode(fMode);
 
-	      // threshold=0;
+	      threshold=0;
 	      cprintf(MAGENTA, "Threshold: ");
 	      if (doc.HasMember("threshold")) {	
 		if (doc["threshold"].IsInt()) {
@@ -683,10 +690,11 @@ int ZmqSocket::SendHeaderData(int 0, bool false, uint32_t SLS_DETECTOR_JSON_HEAD
 		    }
 		  }
 		  
-	      }
+		cprintf(MAGENTA, "%s\n" , detectorMode_s.c_str());
+	      } else
+		cprintf(RED, "%s\n" , frameMode_s.c_str());
 
 	      mt->setDetectorMode(dMode);
-	      cprintf(MAGENTA, "%s\n" , detectorMode_s.c_str());
 
 	      // cout << "done " << endl;
 
@@ -737,7 +745,7 @@ int ZmqSocket::SendHeaderData(int 0, bool false, uint32_t SLS_DETECTOR_JSON_HEAD
 
 	    // cout << "file" << endl;
 	    //  cout << "data " << endl;
-	  if (of==NULL) {
+	  if (of==NULL && dMode!=eAnalog && fMode!=ePedestal && threshold<=0) {
 #ifdef WRITE_QUAD
 	    sprintf(ofname,"%s_%ld.clust2",filename.c_str(),fileindex);
 #endif
@@ -772,15 +780,13 @@ int ZmqSocket::SendHeaderData(int 0, bool false, uint32_t SLS_DETECTOR_JSON_HEAD
 		mt->pushData(buff);
 		mt->nextThread();
 		mt->popFree(buff);
+		cprintf(GREEN, "Frame\n");
 	      } else {
 		cprintf(RED, "Incomplete frame: received only %d packet\n", packetNumber);
 		//length = 
 		  zmqsocket->ReceiveData(0, dummybuff, size);
 
 	      }
-	
-	  
-	  
 	  iframe++;
 
 	}	// exiting infinite loop

slsDetectorCalibration/multiThreadedAnalogDetector.h

@@ -17,7 +17,7 @@
 #include <pthread.h>
 
 #include "analogDetector.h"
-#include "circularFifo.h"
+#include "CircularFifo.h"
 #include <unistd.h>
 #include <stdio.h>
 #include <stdlib.h>
@@ -462,6 +462,50 @@ public:
   };
    
   
+  virtual double *getPedestalRMS(){
+    int nx, ny;
+    dets[0]->getDetectorSize(nx,ny);
+    // if (ped) delete [] ped;
+    double *rms=new double[nx*ny];
+    double *p0=new double[nx*ny];
+    
+    for (int i=0; i<nThreads; i++) {
+      //inte=(slsInterpolation*)dets[i]->getInterpolation(nb,emi,ema);
+      //  cout << i << endl;
+      p0=dets[i]->getPedestalRMS(p0);
+      if (p0) {
+	if (i==0) {
+	  
+	  for (int ib=0; ib<nx*ny; ib++) {
+	    rms[ib]=p0[ib]*p0[ib]/((double)nThreads);
+	  //  cout << p0[ib] << " ";
+	}
+	} else {
+	for (int ib=0; ib<nx*ny; ib++) {
+	  rms[ib]+=p0[ib]*p0[ib]/((double)nThreads);
+	  //  cout << p0[ib] << " ";
+	}
+	}
+      }
+	
+    }
+    delete [] p0;
+    
+    /* for (int ib=0; ib<nx*ny; ib++) { */
+    /*   if (rms[ib]>0) */
+    /* 	rms[ib]=sqrt(ped[ib]); */
+    /*   else */
+    /* 	rms[ib]=0; */
+    /* } */
+
+
+    return rms;
+  };
+   
+  
+
+
+   
    virtual double *setPedestal(double *h=NULL){
      //int nb=0;
     
@@ -498,6 +542,27 @@ public:
    };
 
 
+   virtual void *writePedestalRMS(const char * imgname){     
+    
+     int nx, ny;
+     dets[0]->getDetectorSize(nx,ny);
+   
+      double *rms=getPedestalRMS();
+      float *gm=new float[nx*ny];
+      if (gm) {
+       for (int ix=0; ix<nx*ny; ix++) {
+	 gm[ix]=rms[ix];
+       }    
+       WriteToTiff(gm,imgname ,nx, ny); 
+       delete [] gm;
+       delete [] rms;
+     } else cout << "Could not allocate float image " << endl;
+    
+    return NULL;
+
+   };
+
+
   virtual void *readPedestal(const char * imgname, int nb=-1, double emin=1, double emax=0){
     
     int nx, ny;

slsDetectorGui/CMakeLists.txt

@@ -1,10 +1,13 @@
 set(CMAKE_AUTOMOC ON)
 
+find_package(PNG REQUIRED)
+find_package(ZLIB REQUIRED)
+
 set(SOURCES
-    slsDetectorPlotting/src/SlsQt1DPlot.cxx
-    slsDetectorPlotting/src/SlsQt1DZoomer.cxx
-    slsDetectorPlotting/src/SlsQt2DHist.cxx
-    slsDetectorPlotting/src/SlsQt2DPlot.cxx
+    slsDetectorPlotting/src/SlsQt1DPlot.cpp
+    slsDetectorPlotting/src/SlsQt1DZoomer.cpp
+    slsDetectorPlotting/src/SlsQt2DHist.cpp
+    slsDetectorPlotting/src/SlsQt2DPlot.cpp
     src/qDetectorMain.cpp
     src/qDrawPlot.cpp
     src/qCloneWidget.cpp
@@ -89,8 +92,8 @@ target_link_libraries(slsDetectorGui PUBLIC
     ${QT_QTCORE_LIBRARIES}
     ${QT_QTGUI_LIBRARIES}
     ${QWT_LIBRARIES}
-    png
-    z
+    PNG::PNG
+    ZLIB::ZLIB
     Qt4::QtOpenGL
     Qt4::QtSvg
 )
@@ -100,10 +103,10 @@ set_target_properties(slsDetectorGui PROPERTIES
 )
 
 install(TARGETS slsDetectorGui
-    EXPORT "${TARGETS_EXPORT_NAME}"
+    # EXPORT "${TARGETS_EXPORT_NAME}"
     RUNTIME DESTINATION ${CMAKE_INSTALL_BINDIR}
-    LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR}
-    ARCHIVE DESTINATION ${CMAKE_INSTALL_LIBDIR}
-    PUBLIC_HEADER DESTINATION ${CMAKE_INSTALL_INCLUDEDIR}
+    # LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR}
+    # ARCHIVE DESTINATION ${CMAKE_INSTALL_LIBDIR}
+    # PUBLIC_HEADER DESTINATION ${CMAKE_INSTALL_INCLUDEDIR}
 )
 

slsDetectorGui/forms/form_cloneplot.ui

@@ -6,8 +6,8 @@
    <rect>
     <x>0</x>
     <y>0</y>
-    <width>500</width>
-    <height>350</height>
+    <width>376</width>
+    <height>425</height>
    </rect>
   </property>
   <property name="minimumSize">
@@ -240,7 +240,7 @@
     <rect>
      <x>0</x>
      <y>0</y>
-     <width>500</width>
+     <width>376</width>
      <height>28</height>
     </rect>
    </property>

slsDetectorGui/forms/form_detectormain.ui

@@ -145,6 +145,10 @@
   <property name="windowTitle">
    <string>SLS Detector GUI</string>
   </property>
+  <property name="windowIcon">
+   <iconset resource="../include/icons.qrc">
+    <normaloff>:/icons/images/mountain.png</normaloff>:/icons/images/mountain.png</iconset>
+  </property>
   <property name="inputMethodHints">
    <set>Qt::ImhNone</set>
   </property>
@@ -371,101 +375,6 @@ p, li { white-space: pre-wrap; }
     </property>
    </widget>
   </widget>
-  <action name="actionOpenSetup">
-   <property name="text">
-    <string>&amp;Load &amp;Setup</string>
-   </property>
-   <property name="font">
-    <font/>
-   </property>
-  </action>
-  <action name="actionSaveSetup">
-   <property name="text">
-    <string>&amp;Save &amp;Setup</string>
-   </property>
-   <property name="font">
-    <font/>
-   </property>
-  </action>
-  <action name="actionMeasurementWizard">
-   <property name="text">
-    <string>&amp;Measurement Wizard</string>
-   </property>
-  </action>
-  <action name="actionOpenConfiguration">
-   <property name="text">
-    <string>&amp;Load &amp;Configuration</string>
-   </property>
-  </action>
-  <action name="actionSaveConfiguration">
-   <property name="text">
-    <string>&amp;Save &amp;Configuration</string>
-   </property>
-  </action>
-  <action name="actionEnergyCalibration">
-   <property name="text">
-    <string>&amp;Energy Calibration</string>
-   </property>
-  </action>
-  <action name="actionAngularCalibration">
-   <property name="text">
-    <string>&amp;Angular Calibration</string>
-   </property>
-  </action>
-  <action name="actionDebug">
-   <property name="checkable">
-    <bool>true</bool>
-   </property>
-   <property name="checked">
-    <bool>false</bool>
-   </property>
-   <property name="text">
-    <string>&amp;Debug</string>
-   </property>
-  </action>
-  <action name="actionBeamline">
-   <property name="checkable">
-    <bool>true</bool>
-   </property>
-   <property name="checked">
-    <bool>false</bool>
-   </property>
-   <property name="text">
-    <string>&amp;Beamline</string>
-   </property>
-  </action>
-  <action name="actionExpert">
-   <property name="checkable">
-    <bool>true</bool>
-   </property>
-   <property name="checked">
-    <bool>false</bool>
-   </property>
-   <property name="text">
-    <string>&amp;Expert</string>
-   </property>
-  </action>
-  <action name="actionConfiguration">
-   <property name="checkable">
-    <bool>true</bool>
-   </property>
-   <property name="checked">
-    <bool>false</bool>
-   </property>
-   <property name="text">
-    <string>&amp;Configuration</string>
-   </property>
-  </action>
-  <action name="actionVersion">
-   <property name="text">
-    <string>&amp;Version</string>
-   </property>
-  </action>
-  <action name="actionAbout">
-   <property name="text">
-    <string>&amp;About</string>
-   </property>
-  </action>
   <action name="actionLoadConfiguration">
    <property name="text">
     <string>Load Configuration</string>
@@ -476,6 +385,11 @@ p, li { white-space: pre-wrap; }
     <string>Load Trimbits</string>
    </property>
   </action>
+  <action name="actionLoadParameters">
+   <property name="text">
+    <string>Load Parameters</string>
+   </property>
+  </action>
   <action name="actionDebug">
    <property name="checkable">
     <bool>true</bool>
@@ -500,12 +414,14 @@ p, li { white-space: pre-wrap; }
     <string>Dockable Windows</string>
    </property>
   </action>
-  <action name="actionLoadParameters">
+  <action name="actionAbout">
    <property name="text">
-    <string>Load Parameters</string>
+    <string>&amp;About</string>
    </property>
   </action>
  </widget>
- <resources/>
+ <resources>
+  <include location="../include/icons.qrc"/>
+ </resources>
  <connections/>
 </ui>

slsDetectorGui/forms/form_tab_measurement.ui

@@ -432,19 +432,6 @@
       <property name="verticalSpacing">
        <number>4</number>
       </property>
-      <item row="5" column="0">
-       <widget class="QLabel" name="lblNumTriggers">
-        <property name="enabled">
-         <bool>false</bool>
-        </property>
-        <property name="toolTip">
-         <string>&lt;html&gt;&lt;head/&gt;&lt;body&gt;&lt;p&gt;Number of Triggers to be expected.&lt;/p&gt;&lt;p&gt; #triggers#&lt;/p&gt;&lt;/body&gt;&lt;/html&gt;</string>
-        </property>
-        <property name="text">
-         <string>Number of Triggers:</string>
-        </property>
-       </widget>
-      </item>
       <item row="4" column="3">
        <widget class="QComboBox" name="comboPeriodUnit">
         <property name="enabled">
@@ -666,108 +653,6 @@ Frame period between exposures.
         </item>
        </widget>
       </item>
-      <item row="6" column="0">
-       <widget class="QLabel" name="lblDelay">
-        <property name="enabled">
-         <bool>false</bool>
-        </property>
-        <property name="toolTip">
-         <string>The Delay between Trigger Edge and Start of Exposure ( or Readout). 
-#delay#</string>
-        </property>
-        <property name="text">
-         <string>Delay After Trigger:</string>
-        </property>
-       </widget>
-      </item>
-      <item row="5" column="2" colspan="2">
-       <widget class="QSpinBox" name="spinNumTriggers">
-        <property name="enabled">
-         <bool>false</bool>
-        </property>
-        <property name="sizePolicy">
-         <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
-          <horstretch>0</horstretch>
-          <verstretch>0</verstretch>
-         </sizepolicy>
-        </property>
-        <property name="minimumSize">
-         <size>
-          <width>0</width>
-          <height>25</height>
-         </size>
-        </property>
-        <property name="toolTip">
-         <string>Number of Triggers to be expected.
- #triggers#</string>
-        </property>
-        <property name="statusTip">
-         <string/>
-        </property>
-        <property name="whatsThis">
-         <string/>
-        </property>
-        <property name="alignment">
-         <set>Qt::AlignLeading|Qt::AlignLeft|Qt::AlignVCenter</set>
-        </property>
-        <property name="keyboardTracking">
-         <bool>false</bool>
-        </property>
-        <property name="suffix">
-         <string/>
-        </property>
-        <property name="minimum">
-         <number>-1</number>
-        </property>
-        <property name="maximum">
-         <number>2000000000</number>
-        </property>
-        <property name="value">
-         <number>1</number>
-        </property>
-       </widget>
-      </item>
-      <item row="6" column="2">
-       <widget class="QDoubleSpinBox" name="spinDelay">
-        <property name="enabled">
-         <bool>false</bool>
-        </property>
-        <property name="sizePolicy">
-         <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
-          <horstretch>0</horstretch>
-          <verstretch>0</verstretch>
-         </sizepolicy>
-        </property>
-        <property name="minimumSize">
-         <size>
-          <width>0</width>
-          <height>25</height>
-         </size>
-        </property>
-        <property name="toolTip">
-         <string>The Delay between Trigger Edge and Start of Exposure ( or Readout). 
-#delay#</string>
-        </property>
-        <property name="alignment">
-         <set>Qt::AlignLeading|Qt::AlignLeft|Qt::AlignVCenter</set>
-        </property>
-        <property name="keyboardTracking">
-         <bool>false</bool>
-        </property>
-        <property name="decimals">
-         <number>9</number>
-        </property>
-        <property name="minimum">
-         <double>-1.000000000000000</double>
-        </property>
-        <property name="maximum">
-         <double>2000000000.000000000000000</double>
-        </property>
-        <property name="value">
-         <double>0.000000000000000</double>
-        </property>
-       </widget>
-      </item>
       <item row="3" column="2">
        <widget class="QDoubleSpinBox" name="spinExpTime">
         <property name="enabled">
@@ -903,65 +788,6 @@ Exposure Time of a frame.
         </property>
        </widget>
       </item>
-      <item row="6" column="3">
-       <widget class="QComboBox" name="comboDelayUnit">
-        <property name="enabled">
-         <bool>false</bool>
-        </property>
-        <property name="sizePolicy">
-         <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
-          <horstretch>0</horstretch>
-          <verstretch>0</verstretch>
-         </sizepolicy>
-        </property>
-        <property name="minimumSize">
-         <size>
-          <width>0</width>
-          <height>25</height>
-         </size>
-        </property>
-        <property name="toolTip">
-         <string>The Delay between Trigger Edge and Start of Exposure ( or Readout). 
-#delay#</string>
-        </property>
-        <property name="layoutDirection">
-         <enum>Qt::LeftToRight</enum>
-        </property>
-        <property name="currentIndex">
-         <number>2</number>
-        </property>
-        <item>
-         <property name="text">
-          <string>hr</string>
-         </property>
-        </item>
-        <item>
-         <property name="text">
-          <string>min</string>
-         </property>
-        </item>
-        <item>
-         <property name="text">
-          <string>s</string>
-         </property>
-        </item>
-        <item>
-         <property name="text">
-          <string>ms</string>
-         </property>
-        </item>
-        <item>
-         <property name="text">
-          <string>us</string>
-         </property>
-        </item>
-        <item>
-         <property name="text">
-          <string>ns</string>
-         </property>
-        </item>
-       </widget>
-      </item>
       <item row="3" column="3">
        <widget class="QComboBox" name="comboExpUnit">
         <property name="enabled">
@@ -1084,6 +910,577 @@ Frame period between exposures.
         </property>
        </spacer>
       </item>
+      <item row="5" column="0">
+       <widget class="QStackedWidget" name="stackedLblTriggerBurst">
+        <property name="sizePolicy">
+         <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+          <horstretch>0</horstretch>
+          <verstretch>0</verstretch>
+         </sizepolicy>
+        </property>
+        <property name="minimumSize">
+         <size>
+          <width>171</width>
+          <height>32</height>
+         </size>
+        </property>
+        <property name="maximumSize">
+         <size>
+          <width>171</width>
+          <height>32</height>
+         </size>
+        </property>
+        <property name="currentIndex">
+         <number>0</number>
+        </property>
+        <widget class="QWidget" name="pageLblTrigger">
+         <layout class="QGridLayout" name="gridLblTrigger">
+          <property name="margin">
+           <number>0</number>
+          </property>
+          <property name="spacing">
+           <number>0</number>
+          </property>
+          <item row="0" column="0">
+           <widget class="QLabel" name="lblNumTriggers">
+            <property name="enabled">
+             <bool>false</bool>
+            </property>
+            <property name="toolTip">
+             <string>&lt;html&gt;&lt;head/&gt;&lt;body&gt;&lt;p&gt;Number of Triggers to be expected.&lt;/p&gt;&lt;p&gt; #triggers#&lt;/p&gt;&lt;/body&gt;&lt;/html&gt;</string>
+            </property>
+            <property name="text">
+             <string>Number of Triggers:</string>
+            </property>
+           </widget>
+          </item>
+         </layout>
+        </widget>
+        <widget class="QWidget" name="pageLblBurst">
+         <layout class="QGridLayout" name="gridLblBurst">
+          <property name="margin">
+           <number>0</number>
+          </property>
+          <property name="spacing">
+           <number>0</number>
+          </property>
+          <item row="0" column="0">
+           <widget class="QLabel" name="lblNumBursts">
+            <property name="enabled">
+             <bool>false</bool>
+            </property>
+            <property name="toolTip">
+             <string>&lt;html&gt;&lt;head/&gt;&lt;body&gt;&lt;p&gt;Number of Triggers to be expected.&lt;/p&gt;&lt;p&gt; #triggers#&lt;/p&gt;&lt;/body&gt;&lt;/html&gt;</string>
+            </property>
+            <property name="text">
+             <string>Number of Bursts:</string>
+            </property>
+           </widget>
+          </item>
+         </layout>
+        </widget>
+       </widget>
+      </item>
+      <item row="5" column="2">
+       <widget class="QStackedWidget" name="stackedSpinTriggerBurst">
+        <property name="sizePolicy">
+         <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+          <horstretch>0</horstretch>
+          <verstretch>0</verstretch>
+         </sizepolicy>
+        </property>
+        <property name="minimumSize">
+         <size>
+          <width>208</width>
+          <height>32</height>
+         </size>
+        </property>
+        <property name="maximumSize">
+         <size>
+          <width>208</width>
+          <height>32</height>
+         </size>
+        </property>
+        <property name="currentIndex">
+         <number>0</number>
+        </property>
+        <widget class="QWidget" name="pageSpinTrigger">
+         <layout class="QGridLayout" name="gridSpinTrigger">
+          <property name="margin">
+           <number>0</number>
+          </property>
+          <property name="spacing">
+           <number>0</number>
+          </property>
+          <item row="0" column="0">
+           <widget class="QSpinBox" name="spinNumTriggers">
+            <property name="enabled">
+             <bool>false</bool>
+            </property>
+            <property name="sizePolicy">
+             <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
+              <horstretch>0</horstretch>
+              <verstretch>0</verstretch>
+             </sizepolicy>
+            </property>
+            <property name="minimumSize">
+             <size>
+              <width>0</width>
+              <height>25</height>
+             </size>
+            </property>
+            <property name="toolTip">
+             <string>Number of Triggers to be expected.
+ #triggers#</string>
+            </property>
+            <property name="statusTip">
+             <string/>
+            </property>
+            <property name="whatsThis">
+             <string/>
+            </property>
+            <property name="alignment">
+             <set>Qt::AlignLeading|Qt::AlignLeft|Qt::AlignVCenter</set>
+            </property>
+            <property name="keyboardTracking">
+             <bool>false</bool>
+            </property>
+            <property name="suffix">
+             <string/>
+            </property>
+            <property name="minimum">
+             <number>-1</number>
+            </property>
+            <property name="maximum">
+             <number>2000000000</number>
+            </property>
+            <property name="value">
+             <number>1</number>
+            </property>
+           </widget>
+          </item>
+         </layout>
+        </widget>
+        <widget class="QWidget" name="pageSpinBurst">
+         <layout class="QGridLayout" name="gridSpinBurst">
+          <property name="margin">
+           <number>0</number>
+          </property>
+          <property name="spacing">
+           <number>0</number>
+          </property>
+          <item row="0" column="0">
+           <widget class="QSpinBox" name="spinNumBursts">
+            <property name="enabled">
+             <bool>false</bool>
+            </property>
+            <property name="sizePolicy">
+             <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
+              <horstretch>0</horstretch>
+              <verstretch>0</verstretch>
+             </sizepolicy>
+            </property>
+            <property name="minimumSize">
+             <size>
+              <width>0</width>
+              <height>25</height>
+             </size>
+            </property>
+            <property name="toolTip">
+             <string>Number of Triggers to be expected.
+ #triggers#</string>
+            </property>
+            <property name="statusTip">
+             <string/>
+            </property>
+            <property name="whatsThis">
+             <string/>
+            </property>
+            <property name="alignment">
+             <set>Qt::AlignLeading|Qt::AlignLeft|Qt::AlignVCenter</set>
+            </property>
+            <property name="keyboardTracking">
+             <bool>false</bool>
+            </property>
+            <property name="suffix">
+             <string/>
+            </property>
+            <property name="minimum">
+             <number>-1</number>
+            </property>
+            <property name="maximum">
+             <number>2000000000</number>
+            </property>
+            <property name="value">
+             <number>1</number>
+            </property>
+           </widget>
+          </item>
+         </layout>
+        </widget>
+       </widget>
+      </item>
+      <item row="6" column="0">
+       <widget class="QStackedWidget" name="stackedLblDelayBurstPeriod">
+        <property name="sizePolicy">
+         <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+          <horstretch>0</horstretch>
+          <verstretch>0</verstretch>
+         </sizepolicy>
+        </property>
+        <property name="minimumSize">
+         <size>
+          <width>171</width>
+          <height>32</height>
+         </size>
+        </property>
+        <property name="maximumSize">
+         <size>
+          <width>171</width>
+          <height>32</height>
+         </size>
+        </property>
+        <property name="currentIndex">
+         <number>0</number>
+        </property>
+        <widget class="QWidget" name="pageLblDelay">
+         <layout class="QGridLayout" name="gridLblDelay">
+          <property name="margin">
+           <number>0</number>
+          </property>
+          <property name="spacing">
+           <number>0</number>
+          </property>
+          <item row="0" column="0">
+           <widget class="QLabel" name="lblDelay">
+            <property name="enabled">
+             <bool>false</bool>
+            </property>
+            <property name="toolTip">
+             <string>&lt;html&gt;&lt;head/&gt;&lt;body&gt;&lt;p&gt;Number of Triggers to be expected.&lt;/p&gt;&lt;p&gt; #triggers#&lt;/p&gt;&lt;/body&gt;&lt;/html&gt;</string>
+            </property>
+            <property name="text">
+             <string>Delay After Trigger:</string>
+            </property>
+           </widget>
+          </item>
+         </layout>
+        </widget>
+        <widget class="QWidget" name="pageLblBurstPeriod">
+         <layout class="QGridLayout" name="gridLblBurstPeriod">
+          <property name="margin">
+           <number>0</number>
+          </property>
+          <property name="spacing">
+           <number>0</number>
+          </property>
+          <item row="0" column="1">
+           <widget class="QLabel" name="lblBurstPeriod">
+            <property name="enabled">
+             <bool>false</bool>
+            </property>
+            <property name="toolTip">
+             <string>&lt;html&gt;&lt;head/&gt;&lt;body&gt;&lt;p&gt;Number of Triggers to be expected.&lt;/p&gt;&lt;p&gt; #triggers#&lt;/p&gt;&lt;/body&gt;&lt;/html&gt;</string>
+            </property>
+            <property name="text">
+             <string>Burst Period:</string>
+            </property>
+           </widget>
+          </item>
+         </layout>
+        </widget>
+       </widget>
+      </item>
+      <item row="6" column="2">
+       <widget class="QStackedWidget" name="stackedSpinDelayBurstPeriod">
+        <property name="sizePolicy">
+         <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+          <horstretch>0</horstretch>
+          <verstretch>0</verstretch>
+         </sizepolicy>
+        </property>
+        <property name="minimumSize">
+         <size>
+          <width>152</width>
+          <height>32</height>
+         </size>
+        </property>
+        <property name="maximumSize">
+         <size>
+          <width>152</width>
+          <height>32</height>
+         </size>
+        </property>
+        <property name="currentIndex">
+         <number>0</number>
+        </property>
+        <widget class="QWidget" name="pageSpinDelay">
+         <layout class="QGridLayout" name="gridSpinDelay">
+          <property name="margin">
+           <number>0</number>
+          </property>
+          <property name="spacing">
+           <number>0</number>
+          </property>
+          <item row="0" column="0">
+           <widget class="QDoubleSpinBox" name="spinDelay">
+            <property name="enabled">
+             <bool>false</bool>
+            </property>
+            <property name="sizePolicy">
+             <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
+              <horstretch>0</horstretch>
+              <verstretch>0</verstretch>
+             </sizepolicy>
+            </property>
+            <property name="minimumSize">
+             <size>
+              <width>0</width>
+              <height>25</height>
+             </size>
+            </property>
+            <property name="toolTip">
+             <string>The Delay between Trigger Edge and Start of Exposure ( or Readout). 
+#delay#</string>
+            </property>
+            <property name="alignment">
+             <set>Qt::AlignLeading|Qt::AlignLeft|Qt::AlignVCenter</set>
+            </property>
+            <property name="keyboardTracking">
+             <bool>false</bool>
+            </property>
+            <property name="decimals">
+             <number>9</number>
+            </property>
+            <property name="minimum">
+             <double>-1.000000000000000</double>
+            </property>
+            <property name="maximum">
+             <double>2000000000.000000000000000</double>
+            </property>
+            <property name="value">
+             <double>0.000000000000000</double>
+            </property>
+           </widget>
+          </item>
+         </layout>
+        </widget>
+        <widget class="QWidget" name="pageSpinBurstPeriod">
+         <layout class="QGridLayout" name="gridSpinBurstPeriod">
+          <property name="margin">
+           <number>0</number>
+          </property>
+          <property name="spacing">
+           <number>0</number>
+          </property>
+          <item row="0" column="0">
+           <widget class="QDoubleSpinBox" name="spinBurstPeriod">
+            <property name="enabled">
+             <bool>false</bool>
+            </property>
+            <property name="sizePolicy">
+             <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
+              <horstretch>0</horstretch>
+              <verstretch>0</verstretch>
+             </sizepolicy>
+            </property>
+            <property name="minimumSize">
+             <size>
+              <width>0</width>
+              <height>25</height>
+             </size>
+            </property>
+            <property name="toolTip">
+             <string>The Delay between Trigger Edge and Start of Exposure ( or Readout). 
+#delay#</string>
+            </property>
+            <property name="alignment">
+             <set>Qt::AlignLeading|Qt::AlignLeft|Qt::AlignVCenter</set>
+            </property>
+            <property name="keyboardTracking">
+             <bool>false</bool>
+            </property>
+            <property name="decimals">
+             <number>9</number>
+            </property>
+            <property name="minimum">
+             <double>-1.000000000000000</double>
+            </property>
+            <property name="maximum">
+             <double>2000000000.000000000000000</double>
+            </property>
+            <property name="value">
+             <double>0.000000000000000</double>
+            </property>
+           </widget>
+          </item>
+         </layout>
+        </widget>
+       </widget>
+      </item>
+      <item row="6" column="3">
+       <widget class="QStackedWidget" name="stackedComboDelayBurstPeriod">
+        <property name="sizePolicy">
+         <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+          <horstretch>0</horstretch>
+          <verstretch>0</verstretch>
+         </sizepolicy>
+        </property>
+        <property name="minimumSize">
+         <size>
+          <width>50</width>
+          <height>32</height>
+         </size>
+        </property>
+        <property name="maximumSize">
+         <size>
+          <width>50</width>
+          <height>32</height>
+         </size>
+        </property>
+        <property name="currentIndex">
+         <number>0</number>
+        </property>
+        <widget class="QWidget" name="pageComboDelay">
+         <layout class="QGridLayout" name="gridComboDelay">
+          <property name="margin">
+           <number>0</number>
+          </property>
+          <property name="spacing">
+           <number>0</number>
+          </property>
+          <item row="0" column="0">
+           <widget class="QComboBox" name="comboDelayUnit">
+            <property name="enabled">
+             <bool>false</bool>
+            </property>
+            <property name="sizePolicy">
+             <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
+              <horstretch>0</horstretch>
+              <verstretch>0</verstretch>
+             </sizepolicy>
+            </property>
+            <property name="minimumSize">
+             <size>
+              <width>0</width>
+              <height>25</height>
+             </size>
+            </property>
+            <property name="toolTip">
+             <string>The Delay between Trigger Edge and Start of Exposure ( or Readout). 
+#delay#</string>
+            </property>
+            <property name="layoutDirection">
+             <enum>Qt::LeftToRight</enum>
+            </property>
+            <property name="currentIndex">
+             <number>2</number>
+            </property>
+            <item>
+             <property name="text">
+              <string>hr</string>
+             </property>
+            </item>
+            <item>
+             <property name="text">
+              <string>min</string>
+             </property>
+            </item>
+            <item>
+             <property name="text">
+              <string>s</string>
+             </property>
+            </item>
+            <item>
+             <property name="text">
+              <string>ms</string>
+             </property>
+            </item>
+            <item>
+             <property name="text">
+              <string>us</string>
+             </property>
+            </item>
+            <item>
+             <property name="text">
+              <string>ns</string>
+             </property>
+            </item>
+           </widget>
+          </item>
+         </layout>
+        </widget>
+        <widget class="QWidget" name="pageComboBurstPeriod">
+         <layout class="QGridLayout" name="gridComboBurstPeriod">
+          <property name="margin">
+           <number>0</number>
+          </property>
+          <property name="spacing">
+           <number>0</number>
+          </property>
+          <item row="0" column="0">
+           <widget class="QComboBox" name="comboBurstPeriodUnit">
+            <property name="enabled">
+             <bool>false</bool>
+            </property>
+            <property name="sizePolicy">
+             <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
+              <horstretch>0</horstretch>
+              <verstretch>0</verstretch>
+             </sizepolicy>
+            </property>
+            <property name="minimumSize">
+             <size>
+              <width>0</width>
+              <height>25</height>
+             </size>
+            </property>
+            <property name="toolTip">
+             <string>The Delay between Trigger Edge and Start of Exposure ( or Readout). 
+#delay#</string>
+            </property>
+            <property name="layoutDirection">
+             <enum>Qt::LeftToRight</enum>
+            </property>
+            <property name="currentIndex">
+             <number>2</number>
+            </property>
+            <item>
+             <property name="text">
+              <string>hr</string>
+             </property>
+            </item>
+            <item>
+             <property name="text">
+              <string>min</string>
+             </property>
+            </item>
+            <item>
+             <property name="text">
+              <string>s</string>
+             </property>
+            </item>
+            <item>
+             <property name="text">
+              <string>ms</string>
+             </property>
+            </item>
+            <item>
+             <property name="text">
+              <string>us</string>
+             </property>
+            </item>
+            <item>
+             <property name="text">
+              <string>ns</string>
+             </property>
+            </item>
+           </widget>
+          </item>
+         </layout>
+        </widget>
+       </widget>
+      </item>
      </layout>
     </widget>
    </item>
@@ -1116,9 +1513,6 @@ Frame period between exposures.
   <tabstop>comboExpUnit</tabstop>
   <tabstop>spinPeriod</tabstop>
   <tabstop>comboPeriodUnit</tabstop>
-  <tabstop>spinNumTriggers</tabstop>
-  <tabstop>spinDelay</tabstop>
-  <tabstop>comboDelayUnit</tabstop>
   <tabstop>spinNumSamples</tabstop>
  </tabstops>
  <resources>

slsDetectorGui/forms/form_tab_plot.ui

@@ -822,7 +822,7 @@ Displays minimum, maximum and sum of values for each plot.
       <item row="0" column="1">
        <widget class="QStackedWidget" name="stackedWidget1D">
         <property name="currentIndex">
-         <number>3</number>
+         <number>5</number>
         </property>
         <widget class="QWidget" name="pageSuperImpose">
          <layout class="QHBoxLayout" name="horizontalLayout_2">
@@ -1360,6 +1360,27 @@ Displays minimum, maximum and sum of values for each plot.
             </property>
            </spacer>
           </item>
+          <item>
+           <widget class="QCheckBox" name="chkGainPlot1D">
+            <property name="enabled">
+             <bool>false</bool>
+            </property>
+            <property name="sizePolicy">
+             <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+              <horstretch>0</horstretch>
+              <verstretch>0</verstretch>
+             </sizepolicy>
+            </property>
+            <property name="toolTip">
+             <string>&lt;nobr&gt;
+Displays minimum, maximum and sum of values for each plot.
+&lt;nobr&gt;</string>
+            </property>
+            <property name="text">
+             <string>Gain Plot</string>
+            </property>
+           </widget>
+          </item>
          </layout>
         </widget>
        </widget>
@@ -2347,7 +2368,6 @@ Displays minimum, maximum and sum of values for each plot.
   <zorder>box1D</zorder>
   <zorder>boxFrequency</zorder>
   <zorder>box2D</zorder>
-  <zorder>horizontalSpacer_6</zorder>
   <zorder>boxPlotAxis</zorder>
   <zorder>boxSave</zorder>
  </widget>

slsDetectorGui/forms/form_tab_settings.ui

@@ -214,6 +214,46 @@
        <string>Very Low Gain</string>
       </property>
      </item>
+     <item>
+      <property name="text">
+       <string>G1_HG</string>
+      </property>
+     </item>
+     <item>
+      <property name="text">
+       <string>G1_LG</string>
+      </property>
+     </item>
+     <item>
+      <property name="text">
+       <string>G2_HC_HG</string>
+      </property>
+     </item>
+     <item>
+      <property name="text">
+       <string>G2_HC_LG</string>
+      </property>
+     </item>
+     <item>
+      <property name="text">
+       <string>G2_LC_HG</string>
+      </property>
+     </item>
+     <item>
+      <property name="text">
+       <string>G2_LC_LG</string>
+      </property>
+     </item>
+     <item>
+      <property name="text">
+       <string>G4_HG</string>
+      </property>
+     </item>
+     <item>
+      <property name="text">
+       <string>G4_LG</string>
+      </property>
+     </item>
      <item>
       <property name="text">
        <string>Undefined</string>

slsDetectorGui/include/qCloneWidget.h

@@ -1,25 +1,20 @@
 #pragma once
-
 #include "ui_form_cloneplot.h"
+#include <QMainWindow>
+#include <QString>
 
 class SlsQtH1D;
 class SlsQt1DPlot;
 class SlsQt2DPlot;
 
-#include <QMainWindow>
-#include <QString>
-
-#include <iostream>
-#include <string>
-
 class qCloneWidget : public QMainWindow, private Ui::ClonePlotObject {
     Q_OBJECT
 
   public:
-    qCloneWidget(QWidget *parent, SlsQt1DPlot *p1, SlsQt2DPlot *p2, SlsQt2DPlot *gp,
-                 QString title, QString filePath, QString fileName,
-                 int64_t aIndex, bool displayStats, QString min, QString max,
-                 QString sum);
+    qCloneWidget(QWidget *parent, SlsQt1DPlot *p1, SlsQt2DPlot *p2,
+                 SlsQt1DPlot *gp1, SlsQt2DPlot *gp, QString title,
+                 QString filePath, QString fileName, int64_t aIndex,
+                 bool displayStats, QString min, QString max, QString sum);
 
     ~qCloneWidget();
 
@@ -37,6 +32,7 @@ class qCloneWidget : public QMainWindow, private Ui::ClonePlotObject {
     int id;
     SlsQt1DPlot *plot1d{nullptr};
     SlsQt2DPlot *plot2d{nullptr};
+    SlsQt1DPlot *gainplot1d{nullptr};
     SlsQt2DPlot *gainplot2d{nullptr};
     QString filePath{"/"};
     QString fileName{"run"};

slsDetectorGui/include/qDacWidget.h

@@ -1,17 +1,15 @@
 #pragma once
-
 #include "ui_form_dac.h"
-
 #include "Detector.h"
 #include "sls_detector_defs.h"
-
 #include <string>
 
 class qDacWidget : public QWidget, private Ui::WidgetDacObject {
     Q_OBJECT
 
   public:
-	qDacWidget(QWidget *parent, sls::Detector* detector, bool d, std::string n, slsDetectorDefs::dacIndex i);
+    qDacWidget(QWidget *parent, sls::Detector *detector, bool d, std::string n,
+               slsDetectorDefs::dacIndex i);
     ~qDacWidget();
     void SetDetectorIndex(int id);
 
@@ -30,4 +28,3 @@ private:
     slsDetectorDefs::dacIndex index;
     int detectorIndex{-1};
 };
-

slsDetectorGui/include/qDefs.h

@@ -5,22 +5,29 @@
 #include <QAbstractButton>
 #include <QMessageBox>
 
+#include <chrono>
 #include <iostream>
 #include <ostream>
-#include <stdint.h>
+#include <cstdint>
 #include <string>
-#include <chrono>
+
 using std::chrono::duration;
 using std::chrono::duration_cast;
-using std::chrono::nanoseconds;
+using std::chrono::hours;
 using std::chrono::microseconds;
 using std::chrono::milliseconds;
-using std::chrono::seconds;
 using std::chrono::minutes;
-using std::chrono::hours; 
+using std::chrono::nanoseconds;
+using std::chrono::seconds;
 
-#define CATCH_DISPLAY(m, s) catch(...) { qDefs::DisplayExceptions(m, s); }
-#define CATCH_HANDLE(...) catch(...) { qDefs::HandleExceptions(__VA_ARGS__); }
+#define CATCH_DISPLAY(m, s)                                                    \
+    catch (...) {                                                              \
+        qDefs::DisplayExceptions(m, s);                                        \
+    }
+#define CATCH_HANDLE(...)                                                      \
+    catch (...) {                                                              \
+        qDefs::HandleExceptions(__VA_ARGS__);                                  \
+    }
 
 class qDefs : public QWidget {
   public:
@@ -31,6 +38,7 @@ class qDefs : public QWidget {
 
     static const int Q_FONT_SIZE = 9;
     static const int DATA_GAIN_PLOT_RATIO = 5;
+    static const int MIN_HEIGHT_GAIN_PLOT_1D = 75;
 
     static void DisplayExceptions(std::string emsg, std::string src) {
         try {
@@ -46,8 +54,8 @@ class qDefs : public QWidget {
 
     template <class CT> struct NonDeduced { using type = CT; };
     template <class S, typename RT, typename... CT>
-    static void HandleExceptions(const std::string emsg, const std::string src, S* s,
-                                 RT (S::*somefunc)(CT...),
+    static void HandleExceptions(const std::string emsg, const std::string src,
+                                 S *s, RT (S::*somefunc)(CT...),
                                  typename NonDeduced<CT>::type... Args) {
         try {
             throw;
@@ -73,13 +81,20 @@ class qDefs : public QWidget {
 
     static const char *getQFunctionNameFromEnum(enum qFuncNames func) {
         switch (func) {
-        case QF_GET_DETECTOR_STATUS:	return "QF_GET_DETECTOR_STATUS";
-        case QF_START_ACQUISITION:		return "QF_START_ACQUISITION";
-        case QF_STOP_ACQUISITION:		return "QF_STOP_ACQUISITION";
-        case QF_START_AND_READ_ALL:	    return "QF_START_AND_READ_ALL";
-        case QF_EXIT_SERVER:			return "QF_EXIT_SERVER";
-        case QF_NUM_FUNCTIONS:			return "QF_NUM_FUNCTIONS";
-        default:						return "Unknown Function";
+        case QF_GET_DETECTOR_STATUS:
+            return "QF_GET_DETECTOR_STATUS";
+        case QF_START_ACQUISITION:
+            return "QF_START_ACQUISITION";
+        case QF_STOP_ACQUISITION:
+            return "QF_STOP_ACQUISITION";
+        case QF_START_AND_READ_ALL:
+            return "QF_START_AND_READ_ALL";
+        case QF_EXIT_SERVER:
+            return "QF_EXIT_SERVER";
+        case QF_NUM_FUNCTIONS:
+            return "QF_NUM_FUNCTIONS";
+        default:
+            return "Unknown Function";
         }
     };
 
@@ -110,11 +125,16 @@ class qDefs : public QWidget {
 
     static std::string getRangeAsString(enum range r) {
         switch (r) {
-        case XMIN:	return "XMIN";
-        case XMAX:	return "XMAX";
-        case YMIN:	return "YMIN";
-        case YMAX:	return "YMAX";
-        default:	return "Unknown";
+        case XMIN:
+            return "XMIN";
+        case XMAX:
+            return "XMAX";
+        case YMIN:
+            return "YMIN";
+        case YMAX:
+            return "YMAX";
+        default:
+            return "Unknown";
         }
     };
 
@@ -189,7 +209,8 @@ class qDefs : public QWidget {
                 MINUTES);
         }
         return std::make_pair(
-            duration_cast<duration<double, std::ratio<3600>>>(tns).count(), HOURS);
+            duration_cast<duration<double, std::ratio<3600>>>(tns).count(),
+            HOURS);
     }
 
     /** returns the value in ns */
@@ -298,7 +319,9 @@ class qDefs : public QWidget {
     static int ExceptionMessage(std::string message,
                                 std::string exceptionMessage,
                                 std::string source) {
-        return Message(qDefs::WARNING, message + std::string("\nCaught exception:\n") + exceptionMessage, source);
+        return Message(qDefs::WARNING,
+                       message + std::string("\nCaught exception:\n") +
+                           exceptionMessage,
+                       source);
     }
-
 };

slsDetectorGui/include/qDetectorMain.h

@@ -1,8 +1,9 @@
 #pragma once
-
 #include "ui_form_detectormain.h"
-
 #include "qDefs.h"
+#include "Detector.h"
+#include <QTabWidget>
+
 class qDrawPlot;
 class qTabMeasurement;
 class qTabDataOutput;
@@ -12,17 +13,15 @@ class qTabSettings;
 class qTabDebugging;
 class qTabDeveloper;
 class qTabMessages;
-
-#include "Detector.h"
-
-#include <QTabWidget>
+class QScrollArea;
 class QResizeEvent;
 
-/** To Over-ride the QTabWidget class to get the tabBar */
+/** To Over-ride the QTabWidget class to get the tabBar protected
+ * methodTabWidget */
 class MyTabWidget : public QTabWidget {
   public:
     MyTabWidget(QWidget *parent = 0) { setParent(parent); }
-    /** Overridden method from QTabWidget */
+    /** Overridden protected method from QTabWidget */
     QTabBar *tabBar() { return QTabWidget::tabBar(); }
 };
 
@@ -30,8 +29,7 @@ class qDetectorMain : public QMainWindow, private Ui::DetectorMainObject {
     Q_OBJECT
 
   public:
-    qDetectorMain(int argc, char **argv, QApplication *app,
-                  QWidget *parent = 0);
+    qDetectorMain(int multiId, const std::string& fname, bool isDevel);
     ~qDetectorMain();
 
   private slots:
@@ -53,9 +51,9 @@ class qDetectorMain : public QMainWindow, private Ui::DetectorMainObject {
 
   private:
     void SetUpWidgetWindow();
-    void SetUpDetector(const std::string fName, int multiID);
+    void SetUpDetector(const std::string& config_file, int multiID);
     void Initialization();
-    void LoadConfigFile(const std::string fName);
+    void LoadConfigFile(const std::string& config_file);
 
     /** enumeration of the tabs */
     enum {
@@ -71,16 +69,17 @@ class qDetectorMain : public QMainWindow, private Ui::DetectorMainObject {
     };
     slsDetectorDefs::detectorType detType;
     std::unique_ptr<sls::Detector> det;
-    std::unique_ptr<qDrawPlot> plot;
-    std::unique_ptr<MyTabWidget> tabs;
-    std::unique_ptr<qTabMeasurement> tabMeasurement;
-    std::unique_ptr<qTabDataOutput> tabDataOutput;
-    std::unique_ptr<qTabPlot> tabPlot;
-    std::unique_ptr<qTabSettings> tabSettings;
-    std::unique_ptr<qTabAdvanced> tabAdvanced;
-    std::unique_ptr<qTabDebugging> tabDebugging;
-    std::unique_ptr<qTabDeveloper> tabDeveloper;
-    std::unique_ptr<qTabMessages> tabMessages;
+    qDrawPlot *plot;
+    MyTabWidget* tabs;
+    std::unique_ptr<QScrollArea> scroll[NumberOfTabs];
+    qTabMeasurement *tabMeasurement;
+    qTabDataOutput *tabDataOutput;
+    qTabPlot *tabPlot;
+    qTabSettings *tabSettings;
+    qTabAdvanced *tabAdvanced;
+    qTabDebugging *tabDebugging;
+    qTabDeveloper *tabDeveloper;
+    qTabMessages *tabMessages;
     int isDeveloper;
     int heightPlotWindow;
     int heightCentralWidget;

slsDetectorGui/include/qDrawPlot.h

@@ -1,20 +1,15 @@
 #pragma once
-
 #include "ui_form_plot.h"
-
 #include "qDefs.h"
+#include "Detector.h"
+#include <mutex>
+
 class SlsQt1DPlot;
 class SlsQtH1D;
 class SlsQt2DPlot;
 class qCloneWidget;
-
 class detectorData;
-#include "Detector.h"
-
 class QResizeEvent;
-#include <QFutureWatcher>
-
-#include <mutex>
 
 class qDrawPlot : public QWidget, private Ui::PlotObject {
     Q_OBJECT
@@ -64,11 +59,11 @@ class qDrawPlot : public QWidget, private Ui::PlotObject {
 
   private slots:
     void SetSaveFileName(QString val);
-    void AcquireFinished();
+    void AcquireThread();
     void UpdatePlot();
 
-
   signals:
+    void StartAcquireSignal();
     void AcquireFinishedSignal();
     void AbortSignal();
     void UpdateSignal();
@@ -79,12 +74,16 @@ class qDrawPlot : public QWidget, private Ui::PlotObject {
     void SetupPlots();
     void GetStatistics(double &min, double &max, double &sum);
     void DetachHists();
-    static void GetAcquisitionFinishedCallBack(double currentProgress, int detectorStatus, void *this_pointer);
-    static void GetDataCallBack(detectorData *data, uint64_t frameIndex, uint32_t subFrameIndex, void *this_pointer);
-    std::string AcquireThread();
+    static void GetAcquisitionFinishedCallBack(double currentProgress,
+                                               int detectorStatus,
+                                               void *this_pointer);
+    static void GetDataCallBack(detectorData *data, uint64_t frameIndex,
+                                uint32_t subFrameIndex, void *this_pointer);
     void AcquisitionFinished(double currentProgress, int detectorStatus);
-    void GetData(detectorData *data, uint64_t frameIndex, uint32_t subFrameIndex);
-    void toDoublePixelData(double *dest, char *source, int size, int databytes, int dr, double *gaindest = NULL);
+    void GetData(detectorData *data, uint64_t frameIndex,
+                 uint32_t subFrameIndex);
+    void toDoublePixelData(double *dest, char *source, int size, int databytes,
+                           int dr, double *gaindest = NULL);
     void Get1dData(double *rawData);
     void Get2dData(double *rawData);
     void Update1dPlot();
@@ -98,9 +97,10 @@ class qDrawPlot : public QWidget, private Ui::PlotObject {
 
     SlsQt1DPlot *plot1d{nullptr};
     QVector<SlsQtH1D *> hists1d;
+    SlsQt1DPlot *gainplot1d{nullptr};
+    SlsQtH1D *gainhist1d{nullptr};
     SlsQt2DPlot *plot2d{nullptr};
     SlsQt2DPlot *gainplot2d{nullptr};
-    QFutureWatcher<std::string> *acqResultWatcher;
 
     bool is1d{true};
     bool isRunning{false};
@@ -124,6 +124,7 @@ class qDrawPlot : public QWidget, private Ui::PlotObject {
     int nHists{1};
     double *datax1d{nullptr};
     std::vector<double *> datay1d;
+    double *gainDatay1d{nullptr};
     double *data2d{nullptr};
     double *gainData{nullptr};
 
@@ -158,6 +159,7 @@ class qDrawPlot : public QWidget, private Ui::PlotObject {
 
     unsigned int nPixelsX{0};
     unsigned int nPixelsY{0};
-    const static int npixelsx_jctb = 400;
-    int npixelsy_jctb{0};
+    uint32_t pixelMask{0};
+    uint32_t gainMask{0};
+    int gainOffset{0};
 };

slsDetectorGui/include/qTabAdvanced.h

@@ -1,11 +1,9 @@
 #pragma once
-
 #include "ui_form_tab_advanced.h"
+#include "Detector.h"
 
 class qDrawPlot;
 
-#include "Detector.h"
-
 class qTabAdvanced : public QWidget, private Ui::TabAdvancedObject {
     Q_OBJECT
 
@@ -65,5 +63,3 @@ private:
     sls::Detector *det;
     qDrawPlot *plot;
 };
-
-

slsDetectorGui/include/qTabDataOutput.h

@@ -1,7 +1,5 @@
 #pragma once
-
 #include "ui_form_tab_dataoutput.h"
-
 #include "Detector.h"
 
 class qTabDataOutput : public QWidget, private Ui::TabDataOutputObject {
@@ -42,9 +40,5 @@ public:
     // Button group for radiobuttons for rate
     QButtonGroup *btnGroupRate;
     // enum for the Eiger Parallel flag
-	enum { 
-		PARALLEL, 
-		NONPARALLEL
+    enum { PARALLEL, NONPARALLEL };
 };
-};
-

slsDetectorGui/include/qTabDebugging.h

@@ -1,7 +1,5 @@
 #pragma once
-
 #include "ui_form_tab_debugging.h"
-
 #include "Detector.h"
 
 class QTreeWidget;
@@ -33,4 +31,3 @@ private:
     QLabel *lblDetectorFirmware;
     QLabel *lblDetectorSoftware;
 };
-

slsDetectorGui/include/qTabDeveloper.h

@@ -1,14 +1,11 @@
 #pragma once
-
 #include "ui_form_tab_developer.h"
-class qDacWidget;
-
 #include "Detector.h"
 #include "sls_detector_defs.h"
-
-#include <string>
 #include <vector>
 
+class qDacWidget;
+
 class qTabDeveloper : public QWidget, private Ui::TabDeveloperObject {
     Q_OBJECT
 
@@ -27,23 +24,15 @@ private:
     void Initialization();
     void PopulateDetectors();
     void GetHighVoltage();
-	slsDetectorDefs::dacIndex getSLSIndex(slsDetectorDefs::detectorType detType, int index);
+    slsDetectorDefs::dacIndex getSLSIndex(slsDetectorDefs::detectorType detType,
+                                          int index);
 
     sls::Detector *det;
     std::vector<qDacWidget *> dacWidgets;
     std::vector<qDacWidget *> adcWidgets;
 
-	enum hvVals {
-		HV_0,
-		HV_90,
-		HV_110,
-		HV_120,
-		HV_150,
-		HV_180,
-		HV_200
-	};
+    enum hvVals { HV_0, HV_90, HV_110, HV_120, HV_150, HV_180, HV_200 };
     int hvmin;
     static const int HV_MIN = 60;
     static const int HV_MAX = 200;
 };
-

slsDetectorGui/include/qTabMeasurement.h

@@ -1,11 +1,8 @@
 #pragma once
-
 #include "ui_form_tab_measurement.h"
-
-class qDrawPlot;
-
 #include "Detector.h"
 
+class qDrawPlot;
 class QStandardItemModel;
 
 class qTabMeasurement : public QWidget, private Ui::TabMeasurementObject {
@@ -26,10 +23,12 @@ private slots:
     void SetNumMeasurements(int val);
     void SetNumFrames(int val);
     void SetNumTriggers(int val);
+    void SetNumBursts(int val);
     void SetNumSamples(int val);
     void SetExposureTime();
     void SetAcquisitionPeriod();
     void SetDelay();
+    void SetBurstPeriod();
     void SetFileWrite(bool val);
     void SetFileName();
     void SetRunIndex(int val);
@@ -41,17 +40,24 @@ private slots:
   private:
     void SetupWidgetWindow();
     void Initialization();
+    /** default, show trigger and delay,
+     * otherwise for gotthard2 in auto timing mode and burst mode,
+     * show bursts and burst period
+     */
+    void ShowTriggerDelay();
     void SetupTimingMode();
     void EnableWidgetsforTimingMode();
 
     void GetTimingMode();
     void GetNumFrames();
     void GetNumTriggers();
+    void GetNumBursts();
     void GetNumSamples();
     void GetExposureTime();
     void GetAcquisitionPeriod();
     void CheckAcqPeriodGreaterThanExp();
     void GetDelay();
+    void GetBurstPeriod();
     void GetFileWrite();
     void GetFileName();
     void GetRunIndex();
@@ -65,17 +71,12 @@ private:
   signals:
     void EnableTabsSignal(bool);
     void FileNameChangedSignal(QString);
+
   private:
     sls::Detector *det;
     qDrawPlot *plot;
     // enum for the timing mode
-	enum{
-		AUTO, 
-		TRIGGER, 
-		GATED, 
-		BURST_TRIGGER, 
-		NUMTIMINGMODES
-	};
+    enum { AUTO, TRIGGER, GATED, BURST_TRIGGER, NUMTIMINGMODES };
     QTimer *progressTimer;
     // tool tip variables
     QString acqPeriodTip;

slsDetectorGui/include/qTabMessages.h

@@ -1,5 +1,4 @@
 #pragma once
-
 #include "ui_form_tab_messages.h"
 
 class QProcess;
@@ -33,4 +32,3 @@ private:
     QProcess *process;
     QStringList lastCommand;
 };
-

slsDetectorGui/include/qTabPlot.h

@@ -1,11 +1,8 @@
 #pragma once
-
 #include "ui_form_tab_plot.h"
-
-class qDrawPlot;
-
 #include "Detector.h"
 
+class qDrawPlot;
 class QButtonGroup;
 
 class qTabPlot : public QWidget, private Ui::TabPlotObject {
@@ -59,5 +56,3 @@ private:
     static QString defaultImageYAxisTitle;
     static QString defaultImageZAxisTitle;
 };
-
-

slsDetectorGui/include/qTabSettings.h

@@ -1,7 +1,5 @@
 #pragma once
-
 #include "ui_form_tab_settings.h"
-
 #include "Detector.h"
 
 class qTabSettings : public QWidget, private Ui::TabSettingsObject {
@@ -41,14 +39,17 @@ private:
         FORCESWITCHG1,
         FORCESWITCHG2,
         VERLOWGAIN,
+        G1_HIGHGAIN,
+        G1_LOWGAIN,
+        G2_HIGHCAP_HIGHGAIN,
+        G2_HIGHCAP_LOWGAIN,
+        G2_LOWCAP_HIGHGAIN,
+        G2_LOWCAP_LOWGAIN,
+        G4_HIGHGAIN,
+        G4_LOWGAIN,
         UNDEFINED,
         UNINITIALIZED,
         NUMSETTINGS
     };
-	enum {
-		DYNAMICRANGE_32,
-		DYNAMICRANGE_16,
-		DYNAMICRANGE_8,
-		DYNAMICRANGE_4
-	};
+    enum { DYNAMICRANGE_32, DYNAMICRANGE_16, DYNAMICRANGE_8, DYNAMICRANGE_4 };
 };

slsDetectorGui/slsDetectorPlotting/include/SlsQt1DPlot.h

@@ -1,33 +1,12 @@
-
-/**
- * @author Ian Johnson
- * @version 1.0
- * Modifications:
- * 19.06.2012: {Some functions have been added by Dhanya to enable zooming in and out
- * without using mouse control:
- * DisableZoom,
- * SetXMinMax,SetYMinMax,
- * GetXMinimum,GetXMaximum,GetYMinimum,GetYMaximum}
- *  */
-
 #ifndef SLSQT1DPLOT_H
 #define SLSQT1DPLOT_H
 
-
-typedef  double double32_t;
-typedef  float float32_t;
-typedef  int int32_t;
-
 #include "ansi.h"
-
-
+#include "SlsQt1DZoomer.h"
 #include <qwt_plot.h>
 #include <qwt_plot_curve.h>
 #include <qwt_plot_marker.h>
 #include <qwt_scale_div.h>
-#include  "SlsQt1DZoomer.h"
-#include <iostream>
-
 
 class QPen;
 class SlsQt1DPlot;
@@ -71,23 +50,20 @@ class SlsQtH1D:public QwtPlotCurve{
 
     SlsQtH1D *Add(double v);
 
-
-
   private:
     int ndata;
     int n_array;
     double dx;
-  double *x,*y;
+    double *x{nullptr}, *y{nullptr};
     double ymin, ymax;
     double firstXgt0, firstYgt0;
     void Initailize();
     int SetUpArrays(int n);
     int CheckIndex(int bx);
 
-  QPen* pen_ptr;
+    QPen *pen_ptr{nullptr};
 };
 
-
 class SlsQtH1DList {
   public:
     SlsQtH1DList(SlsQtH1D *hist = 0);
@@ -100,13 +76,11 @@ class SlsQtH1DList{
     SlsQtH1D *Hist() { return the_hist; } // if no hist returns 0
     SlsQtH1DList *Next() { return the_next; }
 
-
   private:
     SlsQtH1DList *the_next;
     SlsQtH1D *the_hist;
 };
 
-
 class SlsQt1DPlot : public QwtPlot {
     Q_OBJECT
 
@@ -126,37 +100,49 @@ class SlsQt1DPlot:public QwtPlot{
     void InsertVLine(double v);
     void RemoveVLine();
 
-
-  /**	This group of functions have been added by Dhanya on 19.06.2012 to be able to
-  	use zooming functionality without mouse control*/
+    /**	This group of functions have been added by Dhanya on 19.06.2012 to be
+       able to use zooming functionality without mouse control*/
     void DisableZoom(bool disable);
-  void EnableXAutoScaling() {setAxisAutoScale(QwtPlot::xBottom, true);Update();};
-  void EnableYAutoScaling() {setAxisAutoScale(QwtPlot::yLeft, true);Update();};
-  void SetXMinMax(double min,double max){setAxisScale(QwtPlot::xBottom,min,max);};
-  void SetYMinMax(double min,double max){setAxisScale(QwtPlot::yLeft,min,max);};
+    void EnableXAutoScaling() {
+        setAxisAutoScale(QwtPlot::xBottom, true);
+        Update();
+    };
+    void EnableYAutoScaling() {
+        setAxisAutoScale(QwtPlot::yLeft, true);
+        Update();
+    };
+    void SetYStep(int step) { ystep = step; };
+    void SetXMinMax(double min, double max) {
+        setAxisScale(QwtPlot::xBottom, min, max);
+    };
+    void SetYMinMax(double min, double max) {
+        setAxisScale(QwtPlot::yLeft, min, max);
+    };
     double GetXMinimum() { return hist_list->Hist()->GetXMin(); };
     double GetXMaximum() { return hist_list->Hist()->GetXMax(); };
     double GetYMinimum() { return hist_list->Hist()->GetYMin(); };
     double GetYMaximum() { return hist_list->Hist()->GetYMax(); };
     /**---*/
 
-
     void SetZoom(double xmin, double ymin, double x_width, double y_width);
-  void SetZoomBase(double xmin,double ymin,double x_width, double y_width){ zoomer->SetZoomBase(xmin,ymin,x_width,y_width);}
+    void SetZoomBase(double xmin, double ymin, double x_width, double y_width) {
+        zoomer->SetZoomBase(xmin, ymin, x_width, y_width);
+    }
 
     void alignScales();
 
     void SetLogX(bool yes = 1);
     void SetLogY(bool yes = 1);
+
   private:
+    SlsQtH1DList *hist_list{nullptr};
+    SlsQt1DZoomer *zoomer{nullptr};
+    QwtPlotPanner *panner{nullptr};
 
-  SlsQtH1DList*     hist_list;
-  SlsQt1DZoomer*    zoomer;
-  QwtPlotPanner* panner;
-
-  QwtPlotMarker *hline;
-  QwtPlotMarker *vline;
+    QwtPlotMarker *hline{nullptr};
+    QwtPlotMarker *vline{nullptr};
     bool disableZoom{false};
+    int ystep{0};
 
     void SetupZoom();
     void UnknownStuff();
@@ -171,11 +157,9 @@ class SlsQt1DPlot:public QwtPlot{
     friend void SlsQtH1D::Attach(SlsQt1DPlot *p);
     friend void SlsQtH1D::Detach(SlsQt1DPlot *p);
 
-  
   public slots:
     void UnZoom();
     void Update();
-
 };
 
 #endif

slsDetectorGui/slsDetectorPlotting/include/SlsQt1DZoomer.h

@@ -1,15 +1,10 @@
 
-/**
- * @author Ian Johnson
- * @version 1.0
- */
-
 #ifndef SLSQT1DZOOMER_H
 #define SLSQT1DZOOMER_H
 
-#include <qwt_plot_zoomer.h>
-#include <qwt_plot_panner.h>
 #include <qwt_global.h>
+#include <qwt_plot_panner.h>
+#include <qwt_plot_zoomer.h>
 
 class SlsQtH1D;
 
@@ -20,11 +15,7 @@ class SlsQt1DZoomer:public QwtPlotZoomer{
     bool xIsLog, yIsLog;
 
   public:
-#if QWT_VERSION < 0x060100
-  SlsQt1DZoomer(QwtPlotCanvas *canvas):QwtPlotZoomer(canvas){
-#else
     SlsQt1DZoomer(QWidget *canvas) : QwtPlotZoomer(canvas) {
-#endif
         setTrackerMode(AlwaysOn);
         xIsLog = yIsLog = 0;
     }
@@ -47,28 +38,15 @@ class SlsQt1DZoomer:public QwtPlotZoomer{
     bool SetLogX(bool yes) { return xIsLog = yes; }
     bool SetLogY(bool yes) { return yIsLog = yes; }
 
- 
-#if QWT_VERSION<0x060000
-    virtual QwtText trackerText(const QwtDoublePoint &pos) const{
-#else
     using QwtPlotPicker::trackerText;
     virtual QwtText trackerText(const QPoint &pos) const {
-#endif
+
         QColor bg(Qt::white);
-
-#if QT_VERSION >= 0x040300
         bg.setAlpha(200);
-#endif
-
-#if QWT_VERSION<0x060000
-    QwtText text = QwtPlotZoomer::trackerText(pos);
-#else
         QwtText text = QwtPlotPicker::trackerText(pos);
-#endif
         text.setBackgroundBrush(QBrush(bg));
         return text;
     }
-
 };
 
 #endif