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• 5330989f93 post process erosion main Fischer Robert 2024-01-25 10:07:21 +01:00
• bf03c1f44f wait a little longer and for more free memory Fischer Robert 2024-01-24 12:47:10 +01:00
• a25d52365e wait until you find a free GPU Fischer Robert 2024-01-24 12:43:44 +01:00
• 5a7df6d045 bug fixed, test with all timesteps later Fischer Robert 2024-01-24 10:49:49 +01:00
• 95b0c242f1 give it a try Fischer Robert 2024-01-24 10:47:06 +01:00
• 47481a47b3 found the bug, work around Fischer Robert 2024-01-24 10:44:36 +01:00
• a473355966 need to convert str to bool Fischer Robert 2024-01-24 10:16:07 +01:00
• e7bceefb7f some experiments Fischer Robert 2024-01-24 10:15:00 +01:00
• 325c8c481b debug Fischer Robert 2024-01-24 10:08:18 +01:00
• 59a620c5a7 debug Fischer Robert 2024-01-24 10:02:34 +01:00
• 5d77cba9da debug Fischer Robert 2024-01-24 10:01:47 +01:00
• 3258716c4a debug Fischer Robert 2024-01-24 09:56:49 +01:00
• f725b19427 some logic mistake Fischer Robert 2024-01-24 09:44:45 +01:00
• ea9fe77f26 only load data if necessary Fischer Robert 2024-01-23 17:16:45 +01:00
• da385232a6 by default do not overwerite (hard coded) Fischer Robert 2024-01-23 16:45:38 +01:00
• 85b0e370e6 allow float ball radius Fischer Robert 2024-01-23 15:02:01 +01:00
• e52e55db44 need to explicitly load cucim.skiamge Fischer Robert 2024-01-23 13:29:43 +01:00
• a148366b85 tomcat blender up to date Fischer Robert 2024-01-23 13:05:50 +01:00
• 9ef8dcc47f adapted vdb creation for sample Fischer Robert 2023-07-26 12:57:16 +02:00
• 4741a84d4e small bug fix Fischer Robert 2023-07-14 11:04:43 +02:00
• f6ad849abb shift seg im Fischer Robert 2023-07-14 09:34:07 +02:00
• 222946b820 dilate mask with mask_dilate as radius Fischer Robert 2023-07-14 09:03:21 +02:00
• 6fd2d9ea32 blub Fischer Robert 2023-07-14 08:57:03 +02:00
• d143f7ef8d fixed single fille conversion Fischer Robert 2023-07-13 17:05:41 +02:00
• 55a540a63e fixed bugs for masking Fischer Robert 2023-07-13 16:52:55 +02:00
• ed70f0c687 why not, nano? Fischer Robert 2023-07-13 13:08:34 +02:00
• 802b89dc48 hä, stupid indent Fischer Robert 2023-07-13 13:08:02 +02:00
• 5d18265066 allow to use a mask Fischer Robert 2023-07-13 13:03:50 +02:00
• 2b8bb22171 Merge branch 'main' of https://gitlab.psi.ch/fische_r/tomcat-blender Fischer Robert 2023-07-13 12:51:24 +02:00
• 73f1ed3f65 update Fischer Robert 2023-07-13 12:51:10 +02:00
• 2bbadd3628 vdb in readme Fischer Robert 2023-07-04 15:13:55 +02:00
• 175aa78be6 allow to just copy array to npy Fischer Robert 2023-07-04 09:12:24 +02:00
• 3b13ecd044 blub Fischer Robert 2023-07-04 09:08:02 +02:00
• 534124c2bf default minsize 20 also in function Fischer Robert 2023-06-21 10:02:11 +02:00
• 7dd058af16 bug fixing Fischer Robert 2023-06-21 10:01:28 +02:00
• dd3df6ff6e small filename bug Fischer Robert 2023-06-20 15:58:51 +02:00
• c46efd87d6 animate script with vdb Fischer Robert 2023-06-20 15:53:32 +02:00
• 486e316ea7 debug conversion script Fischer Robert 2023-06-20 15:45:56 +02:00
• 4ff8276387 smaller default minsize Fischer Robert 2023-06-20 15:13:35 +02:00
• bd19a31172 conversion within blender Fischer Robert 2023-06-20 15:07:31 +02:00
• e5f2e4b67f debugged npy script Fischer Robert 2023-06-20 14:53:07 +02:00
• 4b4d9d453b script to extract npy from nc Fischer Robert 2023-06-20 14:42:35 +02:00
• 60648f6ab6 pre openvdbxD Fischer Robert 2023-06-20 13:24:22 +02:00
• cdebeb4657 adapted blender script Fischer Robert 2023-05-17 13:20:03 +02:00
• 918c09528c hopefully correct indents Fischer Robert 2023-05-17 13:18:44 +02:00
• 9cf2724418 do not overwerite existing files Fischer Robert 2023-05-17 13:16:29 +02:00
• 76f5f24337 adapted blender script Fischer Robert 2023-05-17 09:22:21 +02:00
• 1d23468014 stupid Fischer Robert 2023-05-16 16:42:29 +02:00
• 2c23ca8c19 new naming convetion timestep Fischer Robert 2023-05-16 16:41:15 +02:00
• 2c865d7fe2 slurm submission script Fischer Robert 2023-05-16 16:36:40 +02:00
• ad37234371 added some lines to execute on ra Fischer Robert 2023-05-16 16:34:26 +02:00
• 5f5f1ad7b3 set default reference time step to 0 Fischer Robert 2023-03-13 10:03:35 +01:00
• 3f27245f0d take timesteps from dyn_data instead of np.arange Fischer Robert 2023-03-13 09:58:51 +01:00
• e539782835 mods for animscripts Fischer Robert 2023-03-13 09:57:55 +01:00
• e52f5c7bd5 script for CL anim Fischer Robert 2023-03-10 08:41:14 +01:00
• 8ea11c297e some mods to blender scripts, formatted TODO in README Fischer Robert 2023-02-08 12:48:54 +01:00
• ab5e25e527 tzpo bug fix (sic!) Fischer Robert 2023-02-06 13:52:18 +01:00
• cf5fe4ff93 allow to selct GPU Fischer Robert 2023-02-06 13:48:36 +01:00
• 053a12f8b8 added GPU image cleaning and image pre-cropping Fischer Robert 2023-02-03 10:50:15 +01:00
• c7d33fd264 first vis of membrane 3II Fischer Robert 2023-02-03 10:31:03 +01:00
• 5ead9f0ab7 default njobs to 16, worki in progres for animation script Fischer Robert 2023-02-01 16:24:11 +01:00
• 73122da99d pass minsize through run2 Fischer Robert 2023-02-01 12:21:08 +01:00
• 7269e3ad3a add minsize to run2 Fischer Robert 2023-02-01 10:52:36 +01:00
• 639a6ba2f8 mistake in the syntax Fischer Robert 2023-02-01 10:06:41 +01:00
• 2395eae471 added routine to remove small objects Fischer Robert 2023-02-01 09:45:48 +01:00
• 046185500c MAterial is uppercase Fischer Robert 2023-01-31 20:09:42 +01:00
• b633e42fd2 defined paths for crack Fischer Robert 2023-01-31 15:29:40 +01:00
• 4d6acc1d60 made animation script hack a little more general Fischer Robert 2023-01-31 14:33:15 +01:00
• 2a81e5ff57 backup von EMPAwiki image processing, to be included in readme Fischer Robert 2022-10-04 14:02:30 +02:00
• c20cc2f783 allow custom structure element for opening Fischer Robert 2022-10-03 11:17:53 +02:00
• 5ec90d4bf9 animate tims data Fischer Robert 2022-09-29 12:52:05 +02:00
• edaab5a2c1 maybe now Fischer Robert 2022-09-28 17:03:46 +02:00
• b7c608effd maybe fix? Fischer Robert 2022-09-28 16:52:06 +02:00
• 07f57bb21b forgot detail in serial Fischer Robert 2022-09-28 16:46:33 +02:00
• 0405aaf4da make parallel default Fischer Robert 2022-09-28 16:35:46 +02:00
• dbea5c6de4 added opening to surface creation in 4D Fischer Robert 2022-09-28 15:53:50 +02:00
• ee33b89046 small bug for serial evaluation of 4D data Fischer Robert 2022-09-27 11:07:22 +02:00
• 8a3b29c954 bug fix all timesteps Fischer Robert 2022-09-27 11:02:29 +02:00
• 3d647f4ec6 changed syntax because lewiner is now the skimage default Fischer Robert 2022-08-31 15:12:41 +02:00
• 35b20104a5 also load 4D data Fischer Robert 2022-08-31 15:04:43 +02:00
• 8d88a71ecf extract stl from 4D segmented data Fischer Robert 2022-08-31 14:48:16 +02:00
• cc5226234c Merge pull request #1 from Pescatore23/add-license-1 Pescatore23 2022-06-27 22:14:17 +02:00
• c3f016b4db Create license Pescatore23 2022-06-27 22:14:03 +02:00
• 17819faf8b log sketch Robert Fischer 2022-03-31 10:51:10 +02:00
• a72762cd9f test interlace video and drafted logo Robert Fischer 2022-03-30 14:06:47 +02:00
• ead2589fab made stl extraction parallel Robert Fischer 2022-03-29 17:05:38 +02:00
• ae5a242c91 typos in README Robert Fischer 2022-03-29 16:05:25 +02:00
• ecf394e64d tested and working Robert Fischer 2022-03-29 10:43:57 +02:00
• 317b47b902 created module for stl extraction and script to copy pngs for correct framerate Robert Fischer 2022-03-25 11:03:50 +01:00
• 65b87e15df test full size vis Robert Fischer 2022-03-16 10:28:19 +01:00
• 85b916632c cleaned up a little Robert Fischer 2022-03-15 16:19:24 +01:00
• ad539c681e testing animations Robert Fischer 2022-03-15 16:18:40 +01:00
• 5f79ba35a8 Initial commit Fischer, Robert 2022-03-15 15:22:19 +01:00