Commit Graph

70 Commits

Author SHA1 Message Date
Beale John Henry
b4fdde80c2 updated instructions at top of script 2025-05-08 15:41:21 +02:00
Beale John Henry
4176f5425d script to select images by resolution 2025-05-08 15:38:23 +02:00
Beale John Henry
16138c9212 changed script name 2025-05-08 10:50:16 +02:00
Beale John Henry
0c9a90f77d debugged and added all argparse 2025-05-08 00:37:38 +02:00
Beale John Henry
2acd84d8a9 replacement for select xtals - works very similar to stream_random 2025-05-08 00:23:12 +02:00
Beale John Henry
5f23127a2f removed - did not work well 2025-05-08 00:22:24 +02:00
Beale John Henry
cb25bbcb44 selection missing is current version 2025-05-07 22:23:14 +02:00
Beale John Henry
5ed62f2d98 deleted a couple of conditions - still needs a bit of cleaning 2025-05-07 22:22:53 +02:00
Beale John Henry
66d776eaab tool from GG to make custom slpits for dual partialator runs 2025-03-18 16:14:04 +01:00
Beale John Henry
82c9c30abf runs stats bit as a slurm job - since bash script doesn't load modules at the moment 2025-03-11 08:32:28 +01:00
Beale John Henry
5e34133fa6 makes summary files and stats for a partialator run 2025-03-11 08:30:23 +01:00
Beale John Henry
d0607a5cdc updated way to open large .stream files without crashing 2025-01-26 21:44:34 +01:00
Beale John Henry
3fbfa5c31f fixed state bug - added try block 2025-01-26 21:32:08 +01:00
Beale John Henry
6f9605d801 fixed crash bug. rewrite of .stream open. couldn't open large stream files. 2025-01-25 22:35:44 +01:00
Beale John Henry
8704397750 script to randomly select a given number of crystals from a stream file 2025-01-25 22:34:48 +01:00
Beale John Henry
e08ba22e2c added % indexed + and sort index column 2025-01-22 15:42:57 +01:00
Beale John Henry
a157901927 updated residues comment 2025-01-22 15:20:01 +01:00
Beale John Henry
b9b81e4778 fixed if run partialator bug 2025-01-22 14:56:00 +01:00
Beale John Henry
f7c2b91630 remove useless fn 2025-01-22 12:43:12 +01:00
Beale John Henry
93a2dc8cef now removes '*_cut.hkl' file 2025-01-22 12:38:53 +01:00
Beale John Henry
6d64d9248e more bug fixes 2025-01-22 12:38:25 +01:00
Beale John Henry
6f16f39015 more updates now runs ok with test data 2025-01-22 12:37:45 +01:00
Beale John Henry
fb32283c9f added lines to log file 2025-01-21 16:54:49 +01:00
Beale John Henry
a38a9b10b1 auto processing script combining split, partialator and make_mtz. in progress 2025-01-21 15:45:46 +01:00
Beale John Henry
ab0f8213f6 image now images 2025-01-21 13:58:35 +01:00
Beale John Henry
8aaa3fb24d fixed A to deg bug 2025-01-21 13:43:19 +01:00
Beale John Henry
db017a52e1 changes names of output files 2025-01-19 22:43:34 +01:00
Beale John Henry
753f0665c3 fixed readlines bug 2025-01-19 22:43:01 +01:00
Beale John Henry
c5868683f6 updated to be compatible with jfj/clara and old pipeline, fixed label bug - no both label, updated bool in argparse 2025-01-16 11:56:42 +01:00
Beale John Henry
58db2c33da updated bool in argparse 2025-01-16 11:54:46 +01:00
Beale John Henry
287780cc2c updated bool in argparse 2025-01-16 11:54:14 +01:00
Beale John Henry
d5c4592ce7 upated log and print statements - now takes reservation - and changed threshold 2025-01-15 02:51:48 +01:00
Beale John Henry
84256080ed changed slurm default and a couple of more changes to plots 2025-01-14 05:53:19 +01:00
Beale John Henry
175ca597fe added wilson plot + d to second x-axis + improved log file 2025-01-13 17:09:37 +01:00
Beale John Henry
152e11dfea func. not check - added wilson to plot + tanh curve fits + relabelled axis 2025-01-13 12:17:08 +01:00
Beale John Henry
38284f77a5 added reservation to the aruguements and it also now gives sensible errors 2025-01-13 10:38:13 +01:00
Beale John Henry
9e3ee138b9 fixed observations bug 2025-01-08 17:02:43 +01:00
Beale John Henry
65408b8dd7 updated to also include truncate to create Fs and cut data resolution 2025-01-08 16:58:27 +01:00
Beale John Henry
9ffee8ff7d now works with improved stats and does not overwrite 2024-02-01 13:29:49 +01:00
Beale John Henry
4c5ade0f24 improved instructions 2024-02-01 09:21:29 +01:00
Beale John Henry
0488b99515 added bug fix for progress bar crash 2024-02-01 09:10:10 +01:00
Beale John Henry
88ce19d2d0 added some instructions 2024-02-01 09:08:04 +01:00
Beale John Henry
4724939a6c endstation added as variable + wait bug fix 2024-01-31 12:19:54 +01:00
Beale John Henry
0464e77288 updated with temporay crystfel version 2024-01-31 11:06:17 +01:00
Beale John Henry
a469bc9d88 fixed uc bug 2024-01-19 16:22:24 +01:00
Beale John Henry
9fd4432d75 bug fix for multiple crystals in chunk 2023-12-10 15:50:34 +01:00
Beale John Henry
a597e41a5c bug fix for missing runs 2023-12-10 15:27:40 +01:00
Beale John Henry
4f8adce28e improved arg explaination 2023-12-10 14:12:29 +01:00
Beale John Henry
06dcf5b2d0 Rsplit bu fix 2023-11-06 09:24:58 +01:00
Beale John Henry
20517a6924 script to selectively remove unwanted crystals from a stream file based on their unit cell lengths and angles 2023-11-03 10:29:00 +01:00