comments, todo note
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@ -13,8 +13,9 @@ def calc_peakfinder_analysis(results, data, pixel_mask_pf):
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if k not in results:
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return
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x_beam = results["beam_center_x"] - 0.5 # to coordinates where position of first pixel/point is 0.5, 0.5
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y_beam = results["beam_center_y"] - 0.5 # to coordinates where position of first pixel/point is 0.5, 0.5
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# to coordinates where position of first pixel/point is 0.5, 0.5
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x_beam = results["beam_center_x"] - 0.5
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y_beam = results["beam_center_y"] - 0.5
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hitfinder_min_snr = results["hitfinder_min_snr"]
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hitfinder_min_pix_count = int(results["hitfinder_min_pix_count"])
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@ -47,9 +48,11 @@ def calc_peakfinder_analysis(results, data, pixel_mask_pf):
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number_of_spots = len(peak_list_x)
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results["number_of_spots"] = number_of_spots
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# to coordinates where position of first pixel/point is 1, 1
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results["spot_x"] = [x + 0.5 for x in peak_list_x]
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results["spot_y"] = [y + 0.5 for y in peak_list_y]
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results["spot_intensity"] = copy(peak_list_value)
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results["spot_intensity"] = copy(peak_list_value) #TODO: why is this copy needed?
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npeaks_threshold_hit = results.get("npeaks_threshold_hit", 15)
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