Caubet Serrabou Marc
ea8207cfe7
Changes in OpenMPI
2020-07-16 14:37:51 +02:00
Caubet Serrabou Marc
f3f3a41111
OpenMPI slurm series
2020-05-20 16:54:17 +02:00
664e5159b5
hdf5: cleanup variants
2020-04-02 10:24:04 +02:00
8dbc793ae3
H5hut: cleanup variants
2020-04-02 10:23:28 +02:00
6d1cdcbf7d
H5hut: cleanup in build-script
2020-04-02 10:22:47 +02:00
2b790316f8
trilinos: make_all removed from build-script
2020-04-02 09:55:49 +02:00
398bc9c9bd
trilinos: cleanup variants
2020-04-02 09:55:00 +02:00
71a17c62eb
parmetis: 4.0.3 variant with gcc/7.4.0 and openmpi/3.1.4 added
2020-04-02 09:43:08 +02:00
2bc9e4381c
openmpi: 3.1.4-1_merlin6 added
2020-04-02 09:40:52 +02:00
eb43be249c
git: rhel6 variants renamed
2020-04-02 09:25:36 +02:00
ab7006361b
git: 3.15.5 added to rhel6 variants
2020-04-02 09:24:34 +02:00
cd64a83015
git: copy libs from GCC to module
2020-04-02 09:23:48 +02:00
4e2620db5b
hdf5: cleanup variants
2020-04-02 08:53:34 +02:00
c022a928b2
Merge branch 'relion' into 'master'
...
Add RELION environmental variables to modulefile
See merge request Pmodules/buildblocks!87
2020-03-30 15:09:58 +02:00
Spencer Bliven
51914825a3
Add RELION environmental variables to modulefile
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These set many defaults, including external tool paths and GUI
configuration options
2020-03-30 15:07:44 +02:00
1e3bf880ef
Merge branch 'crYOLO' into 'master'
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CrYOLO/1.5.6
See merge request Pmodules/buildblocks!86
2020-03-30 15:04:53 +02:00
Spencer Bliven
67c09995ae
Document crYOLO/1.5.6_gpu build process
2020-03-30 14:43:13 +02:00
Spencer Bliven
ab670c0ce2
Move crYOLO paths to config file
2020-02-11 14:41:04 +01:00
90b528ba11
Merge branch 'hdf5storage' into 'master'
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Add hdf5storage to datascience_* environments
See merge request Pmodules/buildblocks!84
2020-02-11 13:43:30 +01:00
Spencer Bliven
69e45392e8
Add hdf5storage to datascience_* environments
2020-02-11 10:16:26 +01:00
cc27732bbb
Merge branch 'cryocare' into 'master'
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Update cryocare environment to work on GPU
See merge request Pmodules/buildblocks!83
2020-02-06 16:05:27 +01:00
Spencer Bliven
17c5710576
Update cryocare environment to work on GPU
2020-02-06 16:06:54 +01:00
b4fbe6b551
Merge branch 'anaconda' into 'master'
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Add warning in modulefile for admins
See merge request Pmodules/buildblocks!81
2020-01-16 16:48:50 +01:00
Spencer Bliven
ef424233ef
Add warning in modulefile for admins
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Loading anaconda as an admin on an Auristor system produces a
reminder not to install anything
2020-01-09 14:28:58 +01:00
07246ad9e6
Merge branch 'motioncor2' into 'master'
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Add MotionCor2 build script
See merge request Pmodules/buildblocks!80
2019-12-03 17:14:38 +01:00
606f3cacaa
Add MotionCor2 build script
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Installation is highly manual. This documents the MotionCor2
installation procedure and automates shared file installation.
Adds 1.2.6 and 1.3.0 variants.
2019-12-03 17:14:37 +01:00
0e8e4e9e68
Merge branch '65-update-anaconda-envs-for-xlrd-jupytext-conda-build' into 'master'
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Resolve "update anaconda envs for xlrd, jupytext, conda-build"
Closes #65
See merge request Pmodules/buildblocks!79
2019-11-07 15:31:24 +01:00
03cc1e648c
adding xlrd to anaconda envs for pandas/excel compatibility
2019-11-07 11:19:35 +01:00
083a95b3af
added conda-build to anaconda hpce-tools
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We should be able to build our own anaconda packages in a centrally
provided environment.
2019-11-07 11:19:32 +01:00
4810bd4c7b
added bayesian-optimization package to anaconda datascience_p37 env
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on mail request by virginie.solans@psi.ch
2019-11-07 11:19:31 +01:00
f000f49893
added plotly and graphviz to anaconda datascience environments
2019-11-07 11:19:30 +01:00
7f3cee67da
added jupytest plugin for jupyterhub
2019-11-07 11:19:29 +01:00
81381c98df
Merge branch '64-dks-new-variants-for-1-1-2' into 'master'
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Resolve "dks: new variants for 1.1.2"
Closes #64
See merge request Pmodules/buildblocks!78
2019-11-05 17:24:37 +01:00
400b226fb7
dks: variants.rhel6 cleanup
2019-11-05 17:24:55 +01:00
46f8ea5775
dks: variants for 1.1.2 added
2019-11-05 17:22:52 +01:00
831a187741
Merge branch '63-boost-build-1-70-0-with-gcc-7-4-0-openmpi-3-1-4' into 'master'
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Resolve "boost: build 1.70.0 with gcc/7.4.0 openmpi/3.1.4"
Closes #63
See merge request Pmodules/buildblocks!77
2019-11-05 17:14:55 +01:00
a08569a2be
boost: variant for 1.70.0 with gcc/7.4.0 openmpi/3.1.4 added
2019-11-05 17:15:21 +01:00
38beb4b420
Merge branch '62-boost-release-1-70-0-with-gcc-7-3-0-openmpi-3-1-3-as-stable' into 'master'
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Resolve "boost: release 1.70.0 with gcc/7.3.0, openmpi/3.1.3 as stable"
Closes #62
See merge request Pmodules/buildblocks!76
2019-11-05 17:08:09 +01:00
99c5fa3b7c
boost: 1.70.0 with gcc/7.3.0, openmpi/3.1.3 released as stable
2019-11-05 17:06:26 +01:00
60531ebb42
Merge branch '61-amex-release-modules-as-stable' into 'master'
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Resolve "amex: release modules as stable"
Closes #61
See merge request Pmodules/buildblocks!75
2019-11-05 16:51:33 +01:00
303f1f18f7
amrex: cleanup release states
2019-11-05 16:52:06 +01:00
b12485cc2f
Merge branch '60-amex-build-18-07_-2-3-d-with-gcc-7-4-0-and-openmpi-3-1-4' into 'master'
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Resolve "amex: build 18.07_{2,3}d with gcc/7.4.0 and openmpi/3.1.4"
Closes #60
See merge request Pmodules/buildblocks!74
2019-11-05 16:47:56 +01:00
86c8b60be4
amrex: variants for 18.07_{2,3}d with gcc/7.4.0 and openmpi/3.1.4 added
2019-11-05 16:47:29 +01:00
5aff191839
Merge branch '59-openmpi-cleanup-variants-files' into 'master'
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Resolve "openmpi: cleanup variants files"
Closes #59
See merge request Pmodules/buildblocks!73
2019-11-05 16:29:33 +01:00
b42387e900
openmpi: variants file for merlin6 added
2019-11-05 16:29:48 +01:00
e38397e11d
openmpi: variants file for Linux renamed to variants.rhel6, cleanup, merlin specific stuff removed
2019-11-05 16:29:03 +01:00
b3f8d27702
Merge branch '58-openmpi-bugfixes-in-build-script' into 'master'
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Resolve "openmpi: bugfixes in build-script"
Closes #58
See merge request Pmodules/buildblocks!72
2019-11-05 16:19:52 +01:00
a089d9a44f
openmpi: use libuc[mpst] from module if not available on system
2019-11-05 16:19:21 +01:00
2c72327241
openmpi: bugfixs in build script
2019-11-05 16:17:21 +01:00
f88f30cf4e
Merge branch 'anaconda' into 'master'
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Update anaconda buildblock to latest deployment
See merge request Pmodules/buildblocks!65
2019-11-05 15:48:03 +01:00
