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OpenMPI slurm series

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This commit is contained in:
Caubet Serrabou Marc
2020-05-20 16:54:17 +02:00
parent 664e5159b5
commit f3f3a41111
3 changed files with 38 additions and 9 deletions
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21
Compiler/openmpi/build
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@@ -23,23 +23,34 @@ pbuild::pre_configure() {
pbuild::add_configure_args "--enable-shared"
pbuild::add_configure_args "--enable-static"
pbuild::add_configure_args "--with-sge=yes"
pbuild::add_configure_args "--with-ucx"
pbuild::add_configure_args "--with-hwloc=internal"
pbuild::add_configure_args "--with-slurm=yes"
if pbuild::use_flag slurm ; then
pbuild::add_configure_args "--with-pmi"
pbuild::add_configure_args "--with-pmi-libdir=/usr/lib64/"
fi
local version
(( version = (${V_MAJOR} * 100 + ${V_MINOR}) * 100 + V_PATCHLVL ))
if (( version < 30104 )) ; then
if (( V_MAJOR < 4 )); then
pbuild::add_configure_args "--enable-mpi-f90"
pbuild::add_configure_args "--enable-mpi-profile"
pbuild::add_configure_args "--enable-smp-locks"
elif (( V_MAJOR >= 4 )); then
pbuild::add_configure_args "--enable-mpi-fortran"
pbuild::add_configure_args "--without-verbs"
fi
}
pbuild::post_install() {
mkdir -p "${PREFIX}/lib/fallback"
local -r binary=$(ls "${PREFIX}"/lib/libmpi.so.*.*.*)
pbuild::install_shared_libs "${binary}" "${PREFIX}/lib/fallback" '/usr/.*/libuc[mpst].so'
pbuild::install_shared_libs "${binary}" "${PREFIX}/lib/fallback" '/usr/.*/libnuma.so'
pbuild::install_shared_libs "${binary}" "${PREFIX}/lib/fallback" '/usr/.*/libbverbs.so'
pbuild::install_shared_libs "${binary}" "${PREFIX}/lib/fallback" '/usr/.*/librdmacm.so'
pbuild::install_shared_libs "${binary}" "${PREFIX}/lib/fallback" '/libuc[mpst].so'
pbuild::install_shared_libs "${binary}" "${PREFIX}/lib/fallback" '/libnuma.so'
pbuild::install_shared_libs "${binary}" "${PREFIX}/lib/fallback" '/libibverbs.so'
pbuild::install_shared_libs "${binary}" "${PREFIX}/lib/fallback" '/librdmacm.so'
pbuild::install_shared_libs "${binary}" "${PREFIX}/lib/fallback" '/libpmi.so'
pbuild::install_shared_libs "${binary}" "${PREFIX}/lib/fallback" '/libpmi2.so'
}

20
Compiler/openmpi/files/variants.merlin6
View File

@@ -1,3 +1,19 @@
openmpi/3.1.4_merlin6 stable gcc/{7.4.0,8.3.0}
openmpi/3.1.4-1_merlin6 stable gcc/{7.4.0,8.3.0}
openmpi/3.1.4_merlin6 stable gcc/{7.4.0,8.3.0}
openmpi/3.1.5_merlin6 deprecated gcc/{7.3.0,7.4.0,8.3.0,9.2.0}
openmpi/3.1.5_merlin6 deprecated intel/{15.2,17.4,18.4}
openmpi/3.1.5-1_merlin6 stable gcc/{7.3.0,7.4.0,8.3.0,9.2.0}
openmpi/3.1.5-1_merlin6 stable intel/{15.2,17.4,18.4}
openmpi/2.1.6_slurm unstable gcc/{4.9.4,5.5.0,6.5.0,7.4.0,8.3.0,9.2.0}
openmpi/2.1.6_slurm unstable intel/{15.2,17.4,18.4}
openmpi/3.0.5_slurm unstable gcc/{4.9.4,5.5.0,6.5.0,7.4.0,8.3.0,9.2.0}
openmpi/3.0.5_slurm unstable intel/{15.2,17.4,18.4}
openmpi/3.1.6_slurm stable gcc/{4.9.4,5.5.0,6.5.0,7.5.0,8.4.0,9.3.0}
openmpi/3.1.6_slurm stable intel/{15.2,17.4,18.4,20.1}
openmpi/4.0.3_slurm unstable gcc/{4.9.4,5.5.0,6.5.0,7.5.0,8.4.0,9.3.0}
openmpi/4.0.3_slurm unstable intel/{15.2,17.4,18.4,20.1}

6
Compiler/openmpi/modulefile
View File

@@ -28,9 +28,11 @@ setenv MPIRUN $PREFIX/bin/mpirun
set libibverbs [glob -nocomplain /usr/lib{64,}/libibverbs.so.1*]
set libnuma [glob -nocomplain /usr/lib{64,}/libnuma.so.1*]
set librdmacm [glob -nocomplain /usr/lib{64,}/librdmacm.so.1*]
set libucx [glob -nocomplain /usr/lib{64,}/libuc[mpst].so.0*]
set libucx [glob -nocomplain /usr/lib{64,}/libuc\[mpst\].so.0*]
set libpmi [glob -nocomplain /usr/lib{64,}/libpmi.so.0*]
set libpmi2 [glob -nocomplain /usr/lib{64,}/libpmi2.so.0*]
if { $libibverbs eq "" || $libnuma eq "" || $librdmacm eq "" || $libucx eq "" } {
if { $libibverbs eq "" || $libnuma eq "" || $librdmacm eq "" || $libucx eq "" || $libpmi eq "" || $libpmi2 eq "" } {
if { [file isdirectory $PREFIX/lib/fallback] } {
prepend-path LD_LIBRARY_PATH $PREFIX/lib/fallback
}