leonarski_fandClaude Opus 4.8
f6eca6c69e
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The Kabsch profile-fit weights floored the per-pixel variance at 1.0, far above the real detector noise floor (electronic noise is well below 1 for both EIGER and JUNGFRAU). The true floor is the quantization noise from rounding the charge-spread deposited energy to an integer: Var = 1/12. The 1.0 floor silently over-regularized — it inflated weak-reflection sigma ~6x at high resolution and pinned the scaling error model's `a` term at its 0.25 floor, suppressing ISa. Use PIXEL_VARIANCE_FLOOR = 1/12, and guard against the weak-reflection runaways it exposes: fall back to the box-sum (summation) intensity when the profile fit diverges from the summation seed by more than PROFILE_SUMMATION_MAX_NSIGMA box-sum sigmas. Applied identically in the CPU and GPU engines (GPU-vs-CPU equivalence test passes). Battery of 24 rotation crystals: broad ISa gains (lysoC_14 7.8->10.4, plus cytC/Ins/Myo), EcwtAL500 completeness 51->92% and CC1/2 35->79%, pding4_001 space group now correct; no space-group regressions. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Jungfraujoch
Application to receive data from the PSI JUNGFRAU and EIGER detectors.
All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.