leonarski_fandClaude Opus 5
bf41b1fab1
The second first pass was skipped where the measured centre sat within three times the fit's own sigma of the file's - a quarter of the non-SLS corpus, eight of thirty-two runs. That is a decision taken at a threshold before the evidence is in, and the evidence here costs a median 0.55 s: the spots are already found and cached, and their positions do not depend on the centre, so a second first pass is a median 20 % of what the first one costs. Worse, the gate removed exactly the case worth asking about. A centre error ALONG the spindle does not fail - it holds 96-100 % of frames indexed and quietly returns an axis harmonic - and the scale it turns on is a fraction of a pixel: measured on real data, 0.12 px of centre is the whole difference between the deposited cell and a halved axis. No sigma small enough to gate on would notice that, so the gate could only ever hide the question, never answer it. The three-sigma test stays where it belongs, in the report: it says whether the difference is a measurement or noise, which is what a reader wants to know. It no longer decides whether to look. Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01T3yNBXk4wKdMZy1ak2NY7f
Jungfraujoch
Application to receive data from the PSI JUNGFRAU and EIGER detectors.
All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.