leonarski_fandClaude Opus 5 b1740935d8 CLAUDE.md: bring it back in line with the tree
Verified section by section. The corrections that matter:

- image_analysis/pixel_refinement/ is gone (38ea0ec23). The style rule it
  anchored - no defensive or unrequested code - stays, now attached to the
  experimental analysis code generally.
- rugnux_cli.cpp lives in rugnux/, not tools/ (f737424bd).
- There is no .clang-tidy in the tree and never has been; the naming
  conventions are kept, described as what the code already does.
- compression/ has no sqrt codec - the algorithms are BSHUF_LZ4 and the
  three BSHUF_ZSTD variants. The square-root transform is an FPGA pipeline
  stage.
- jfjoch_hdf5_test is defined in tools/, not tests/.
- JFJOCH_VIEWER_ONLY was undocumented, and is forced ON on Windows/macOS.
- The per-image-scalar recipe pointed at reader/JFJochHttpReader.cpp, which
  does not exist (it is viewer/), and missed that EndMessage carries both a
  per-image vector and a run-mean scalar, so the CBOR END block needs two
  keys. Added the camelCase-dataset vs snake_case-field trap.
- The portability notes described work already done (libjpeg-turbo) and
  recommended fetching Eigen, which CMakeLists explicitly rules out.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
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Jungfraujoch

Application to receive data from the PSI JUNGFRAU and EIGER detectors.

All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.

S
Description
Jungfraujoch Data Acquisition System
Readme GPL-3.0
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