leonarski_f af28cf430b docs: technical pages caught up with the stills rocking curve, beam-shadow integration and refinement
INTEGRATION: the stills prediction window and partiality from the run's
measured rocking curve (a d* table, kept in _process.h5 for --mode scale),
the model-error term in the per-crystal fits, --min-partiality defaults,
the adaptive radius on stills (background-ring reach).
IMAGE: reflections reaching into the beam-stop shadow are not integrated;
no-data pixels masked as dead, not as shadow.
INDEXING: the rotation-scale walk's refusal and refit; the stills geometry
refinement on the given cell's crystal form only.
DECISIONS: the model is refined after validation by default.
CPU_DATA_ANALYSIS: titles in the references that lacked them.
GPU: the still prediction kernel follows the rocking-curve window.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_015CeEGgpKdfkCTJb3YNMJcu
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Jungfraujoch

Application to receive and analyse data from the PSI JUNGFRAU and EIGER detectors, together with rugnux, its program for processing stored diffraction data - rotation and serial, macromolecular and small-molecule - from images to merged reflections.

All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.

S
Description
Jungfraujoch Data Acquisition System, Rugnux Data Processing Application, and Diffraction Viewer
Readme GPL-3.0
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