leonarski_fandClaude Opus 5 847e44d718
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indexing: the short-axis pass stays out of a given cell, and four stale comments
From the code review of the indexing work.

The short-axis pass took its settings from experiment_, which never carries the
max bound RaiseFFTBoundForKnownCell raises for a given cell - that runs on a local
copy. So with -C naming a cell longer than the default search, the short pool could
not represent the cell that was asked for and could only return a sub-multiple of
it; a sub-multiple indexes every frame its parent does, which is the premise of
this whole comparison, so it would tie and be adopted over the user's own cell. It
now skips a run with a known cell entirely, which is also where it had least to
offer: the same call has already lowered the FLOOR against that cell for the
standard pass, so the two schemes were returning the same lattice and paying two
extra FFTs for it.

Four comments asserted rules the code no longer follows. The one directly above
the decision still said the larger cell is taken as spurious "regardless of scheme
order" - the opposite of what the arbiter does - and a dead assignment below it
stated the same thing a second time. The added-class enumeration is described as
exhaustive; it covers the index-n sublattices with a CYCLIC quotient, which is all
of them at n = 2 and n = 3 but not at n = 4, where a supercell doubling two axes
has a (Z/2)^2 quotient and reads at the chance value instead. That is a report and
decides nothing, but it is quoted in the argument for bounding n at 4, so the
bound rests on thinner evidence at n = 4 than it appears to.

And std::rint where the identical loop in IndexAndRefine uses it and says why.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
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Jungfraujoch

Application to receive data from the PSI JUNGFRAU and EIGER detectors.

All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.

S
Description
Jungfraujoch Data Acquisition System
Readme GPL-3.0
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