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leonarski_fandClaude Opus 4.8 39599bc090 tests: git-LFS large-dataset harness + jfjoch_process include cleanup 
- .gitattributes tracks tests/data/*.h5 via git-LFS for big reference datasets.
- tests/TestData.h resolves tests/data files and reports absent / unfetched-LFS-pointer
  so tests can SKIP() instead of failing; tests/data/README.md documents fetching + the
  expected lyso_rotation/lyso_serial datasets.
- JFJochProcessLargeTest: a Catch start-up listener that prints dataset availability, plus
  [large] full-analysis runs (rotation indexing + serial) that SKIP when data is absent.
  Verified against the real 1800-image lyso rotation set (100% indexing, cell 78.2/78.2/37.8)
  and skips cleanly without it.
- jfjoch_process.cpp: drop the ~15 now-unused workflow includes left after the JFJochProcess
  extraction.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-06-21 14:16:34 +02:00
.gitea/workflows
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
acquisition_device
Merge upstream
2026-06-18 18:52:22 +02:00
broker
cmake: add JFJOCH_VIEWER_ONLY to build the viewer standalone
2026-06-19 21:02:28 +02:00
common
JFJochReceiverPlots: Move to common/, so it can be linked without bringing JFJochReceiver HW dependencies
2026-06-20 16:26:11 +02:00
compression
Update to most recent bitshuffle version
2026-06-19 22:10:06 +02:00
detector_control
v1.0.0-rc.151 (#61)
2026-06-16 14:13:29 +02:00
docker
docker: drop fftw too -- the project builds FFTW itself
2026-06-20 15:32:05 +02:00
docs
windows: bundle cuFFT in installer and tag the CUDA/CPU variant
2026-06-21 09:17:52 +02:00
etc
v1.0.0-rc.115 (#22)
2025-12-04 11:56:14 +01:00
fpga
VERSION: 1.0.0-rc.153
2026-06-18 19:26:15 +02:00
frame_serialize
writer: save ROI bitmap and definitions in the master file
2026-06-19 09:41:26 +02:00
frontend
licenses: add third-party notices, attribution texts, and viewer license window
2026-06-20 18:35:50 +02:00
gemmi_gph
viewer: fix MSVC compatibility in viewer-reachable code
2026-06-19 23:15:27 +02:00
image_analysis
CMake: provide Eigen externally again; fix cpack NSIS icon escape
2026-06-20 22:33:12 +02:00
image_puller
CMake: Remove image_puller dependency from the jfjoch_viewer
2026-06-19 23:03:07 +02:00
image_pusher
receiver: count only images the pusher accepted
2026-06-18 14:24:48 +02:00
include
v1.0.0-rc.133
2026-03-26 20:50:33 +01:00
jungfrau
cmake: drop GCC-only hardcoded flags, bump CUDA to C++20
2026-06-19 21:02:28 +02:00
licenses
windows: vendor wingetopt and scope server-only targets out of viewer-only builds
2026-06-20 18:50:20 +02:00
preview
CMake: vendor Eigen (5.0.1) and libjpeg-turbo so the build is self-contained
2026-06-20 07:55:56 +02:00
process
process: extract reprocessing workflow into shared JFJochProcess library
2026-06-21 10:36:18 +02:00
reader
reader: split metadata reading into HDF5MetadataSource + snapshot map
2026-06-21 10:15:09 +02:00
receiver
JFJochReceiverPlots: Move to common/, so it can be linked without bringing JFJochReceiver HW dependencies
2026-06-20 16:26:11 +02:00
tests
tests: git-LFS large-dataset harness + jfjoch_process include cleanup
2026-06-21 14:16:34 +02:00
tools
tests: git-LFS large-dataset harness + jfjoch_process include cleanup
2026-06-21 14:16:34 +02:00
viewer
windows: bundle cuFFT in installer and tag the CUDA/CPU variant
2026-06-21 09:17:52 +02:00
writer
windows: vendor wingetopt and scope server-only targets out of viewer-only builds
2026-06-20 18:50:20 +02:00
xds-plugin
v1.0.0-rc.149 (#59)
2026-06-13 21:27:41 +02:00
.gitattributes
tests: git-LFS large-dataset harness + jfjoch_process include cleanup
2026-06-21 14:16:34 +02:00
.gitignore
Python client is built in CI (no new release)
2024-10-23 21:13:22 +02:00
.gitlab-ci.yml
v1.0.0-rc.94
2025-10-25 22:05:47 +02:00
.readthedocs.yaml
version 1.0.0-rc.25
2024-11-22 21:25:20 +01:00
CLAUDE.md
CLAUDE.md: record Windows viewer goal of MSVC + CUDA, and unbundled deps
2026-06-20 07:38:06 +02:00
CMakeLists.txt
process: extract reprocessing workflow into shared JFJochProcess library
2026-06-21 10:36:18 +02:00
CONTRIBUTING.md
version 1.0.0-rc.27
2024-12-02 21:17:14 +01:00
gen_python_client.sh
v1.0.0-rc.125 (#32)
2026-02-18 16:17:21 +01:00
gitea_create_release.py
v1.0.0-rc.94
2025-10-25 22:05:47 +02:00
gitea_upload_file.py
v1.0.0-rc.94
2025-10-25 22:05:47 +02:00
gitlab_upload_release.sh
1.0.0-rc.89
2025-10-01 22:54:40 +02:00
LICENSE
Harmonize licsense files
2026-06-19 13:56:09 +02:00
make_doc.sh
make_doc.sh: prefer the newest available python3.x
2026-06-19 16:37:32 +02:00
README.md
version 1.0.0-rc.27
2024-12-02 21:17:14 +01:00
THIRD_PARTY_NOTICES.md
CMake: provide Eigen externally again; fix cpack NSIS icon escape
2026-06-20 22:33:12 +02:00
update_version.sh
v1.0.0-rc.125 (#32)
2026-02-18 16:17:21 +01:00
VERSION
VERSION: 1.0.0-rc.153
2026-06-18 19:26:15 +02:00

README.md

Jungfraujoch

Application to receive data from the PSI JUNGFRAU and EIGER detectors.

All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.

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Description
Jungfraujoch Data Acquisition System
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