leonarski_fandClaude Opus 5 34e1ec8fb9 docs: keep the analysis landing page and drop a trailing transition ...

The four-way split leaves CPU_DATA_ANALYSIS.md as the landing page the toctree points at, and one
part ended on a horizontal rule, which docutils refuses at the end of a document.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01EFEJG6WBQv8th4UJFNe53N

2026-09-02 09:20:27 +02:00

..

python_client

docs: publish the powder calibration schemas in the python client docs

2026-08-31 19:02:12 +02:00

ACKNOWLEDGEMENT.md

docs: credit DENZO/SCALEPACK and MOSFLM for the 2D-then-merge architecture

2026-09-02 09:19:16 +02:00

CBOR.md

docs: the beam centre is the PONI, the direct beam is the beam

2026-09-01 15:15:00 +02:00

CHANGELOG.md

docs: one changelog line for the rugnux documentation work

2026-09-02 09:19:16 +02:00

conf.py

docs: put the generated python-client reference behind one landing page

2026-09-02 09:18:36 +02:00

CPU_DATA_ANALYSIS_DECISIONS.md

docs: split the data-analysis reference into four parts along the pipeline

2026-09-02 09:19:16 +02:00

CPU_DATA_ANALYSIS_IMAGE.md

docs: keep the analysis landing page and drop a trailing transition

2026-09-02 09:20:27 +02:00

CPU_DATA_ANALYSIS_INDEXING.md

docs: keep the analysis landing page and drop a trailing transition

2026-09-02 09:20:27 +02:00

CPU_DATA_ANALYSIS_INTEGRATION.md

docs: keep the analysis landing page and drop a trailing transition

2026-09-02 09:20:27 +02:00

CPU_DATA_ANALYSIS.md

docs: keep the analysis landing page and drop a trailing transition

2026-09-02 09:20:27 +02:00

DEPLOYMENT.md

docs: split RUGNUX.md into one page per job, and put rugnux first

2026-09-02 09:18:36 +02:00

DETECTOR_GEOMETRY.md

reader: take a miniCBF's mounting from the imgCIF axis table its header states

2026-08-30 14:03:32 +02:00

DETECTORS.md

v1.0.0.rc-161 (#71)

2026-08-13 17:03:10 +02:00

EXTERNAL_TEST_DATA.md

docs: confirmed cells for three small-molecule sets; drop the unprocessable CCD one

2026-08-31 11:02:38 +02:00

FPGA_DATA_ANALYSIS.md

v1.0.0.rc-161 (#71)

2026-08-13 17:03:10 +02:00

FPGA_DESIGN.md

v1.0.0-rc.34

2025-04-14 11:52:06 +02:00

FPGA_LICENSE.md

version 1.0.0-rc.25

2024-11-22 21:25:20 +01:00

FPGA_NETWORK.md

v1.0.0-rc.125 (#32)

2026-02-18 16:17:21 +01:00

FPGA_PCIE_DRIVER.md

v1.0.0-rc.164 (#74)

2026-08-26 22:47:00 +02:00

FPGA_SETTINGS.md

version 1.0.0-rc.24

2024-11-17 14:55:09 +01:00

FPGA.md

v1.0.0.rc-161 (#71)

2026-08-13 17:03:10 +02:00

HARDWARE.md

version 1.0.0-rc.24

2024-11-17 14:55:09 +01:00

HDF5.md

docs: split RUGNUX.md into one page per job, and put rugnux first

2026-09-02 09:18:36 +02:00

IMAGE_STREAM.md

v1.0.0-rc.165 (#75)

2026-08-27 22:16:54 +02:00

index.rst

docs: an overview page - what a rugnux run does, in order

2026-09-02 09:19:16 +02:00

JFJOCH_BROKER.md

v1.0.0.rc-161 (#71)

2026-08-13 17:03:10 +02:00

JFJOCH_VIEWER.md

docs: bring the changelog and the method notes up to rc.166

2026-08-30 21:15:31 +02:00

JFJOCH_WRITER.md

v1.0.0.rc-161 (#71)

2026-08-13 17:03:10 +02:00

jfjoch.png

v1.0.0-rc.110 (#16)

2025-11-28 12:47:35 +01:00

LICENSE.md

v1.0.0-rc.153 (#63)

2026-06-23 20:29:49 +02:00

NAMING.md

v1.0.0-rc.157 (#67)

2026-07-11 07:19:11 +02:00

OPENAPI_SPECS.rst

version 1.0.0-rc.27

2024-12-02 21:17:14 +01:00

OPENAPI.md

version 1.0.0-rc.27

2024-12-02 21:17:14 +01:00

PIXEL_MASK.md

v1.0.0.rc-161 (#71)

2026-08-13 17:03:10 +02:00

PYTHON_CLIENT.md

docs: put the generated python-client reference behind one landing page

2026-09-02 09:18:36 +02:00

RELEASE_CONTENTS.md

v1.0.0-rc.164 (#74)

2026-08-26 22:47:00 +02:00

REPOSITORIES.md

v1.0.0-rc.164 (#74)

2026-08-26 22:47:00 +02:00

requirements.txt

version 1.0.0-rc.25

2024-11-22 21:25:20 +01:00

RUGNUX_ADVANCED.md

docs: split the data-analysis reference into four parts along the pipeline

2026-09-02 09:19:16 +02:00

RUGNUX_CALIBRATION.md

docs: split RUGNUX.md into one page per job, and put rugnux first

2026-09-02 09:18:36 +02:00

RUGNUX_FORMATS.md

docs: split RUGNUX.md into one page per job, and put rugnux first

2026-09-02 09:18:36 +02:00

RUGNUX_INSTALL.md

docs: split RUGNUX.md into one page per job, and put rugnux first

2026-09-02 09:18:36 +02:00

RUGNUX_INTEGRATION.md

docs: the phenix label override, for the mmCIF as well as the MTZ

2026-09-02 09:19:16 +02:00

RUGNUX_OVERVIEW.md

docs: an overview page - what a rugnux run does, in order

2026-09-02 09:19:16 +02:00

RUGNUX_REPORT.md

docs: split the data-analysis reference into four parts along the pipeline

2026-09-02 09:19:16 +02:00

RUGNUX_TUTORIAL.md

docs: split RUGNUX.md into one page per job, and put rugnux first

2026-09-02 09:18:36 +02:00

RUGNUX.md

docs: an overview page - what a rugnux run does, in order

2026-09-02 09:19:16 +02:00

SECURITY.md

v1.0.0.rc-162 (#72)

2026-08-25 08:21:39 +02:00

SOFTWARE_INTEGRATION.md

v1.0.0.rc-162 (#72)

2026-08-25 08:21:39 +02:00

SOFTWARE.md

v1.0.0-rc.164 (#74)

2026-08-26 22:47:00 +02:00

TESTS.md

docs: the open test battery, updated - 82 datasets, and not only non-SLS

2026-08-30 20:50:10 +02:00

THIRD_PARTY_NOTICES.md

release: 1.0.0-rc.166

2026-08-31 09:11:22 +02:00

TOOLS.md

docs: split RUGNUX.md into one page per job, and put rugnux first

2026-09-02 09:18:36 +02:00

VERSIONING.md

version 1.0.0-rc.24

2024-11-17 14:55:09 +01:00

WEB_FRONTEND.md

version 1.0.0-rc.25

2024-11-22 21:25:20 +01:00