leonarski_f 0381d891bc docs: add HDF5.md describing the NeXus layout and JFJoch extensions
New docs/HDF5.md documents the on-disk HDF5/NeXus format produced by the
writer: a FAIR/derived-metadata rationale (CXI-style per-image spot layout,
NXreflections for integration), the master/data-file layout and the three
NXmx format variants, the NXmx-standard fields that are populated, and every
Jungfraujoch extension group (/entry/MX, /entry/reflections, /entry/azint,
/entry/roi, /entry/image, /entry/profiling, /entry/detector, /entry/xfel,
detectorSpecific, calibration, fluorescence, user). Content is derived from
writer/HDF5NXmx.cpp and writer/HDF5DataFilePlugin*.cpp and cross-checked
against the NXmx and NXreflections definitions.

JFJOCH_WRITER.md's stale, partial structure table is replaced by a pointer to
the new doc; HDF5 is added to the Sphinx toctree.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
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Jungfraujoch

Application to receive data from the PSI JUNGFRAU and EIGER detectors.

All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.

S
Description
Jungfraujoch Data Acquisition System
Readme GPL-3.0
3 GiB
Languages
C++ 70.9%
HTML 10.1%
C 8.2%
TypeScript 5.2%
Tcl 3%
Other 2.4%