leonarski_fandClaude Opus 5
59ba690d10
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A Si(111) monochromator passes lambda/3 with lambda, and a crystal in that beam writes a second diffraction pattern that no single lattice explains. Read at the fundamental it looks like a reciprocal lattice scaled by 1/3 about the beam centre, which is easy to mistake for a second crystal - one dataset in the corpus was diagnosed as needing a multi-lattice indexer on exactly that evidence. The test is exact and costs nothing extra. A spot's reciprocal vector read at the stated wavelength is q = (s_hat - z_hat)/lambda, so at lambda/n it is n*q, and n*q sits on the Ewald sphere of that wavelength by construction. Each frame's orientation is fitted by least squares on the spots the indexer took, and every spot it did not take is asked whether 3*q is an integer point of that same lattice. Spots already within 0.20 of a lattice point are not asked: those are reflections the indexer only just rejected, they land on an integer at every integer scale, and on a clean run they are most of the unindexed list. The null is the same question at a scale no monochromator passes, and it is a real null - the distance from a random point to the nearest lattice point does not depend on the scale. Measured over five rotation sets, 200 images each: on the one whose depositors report a harmonic, 89% of the tested spots are lattice points at lambda/3 against 0.03% for the null, and the population sits at 6-19 A apparent resolution - a third of that in truth, which is where a harmonic must put it. On four sets with no reported problem the same number is 0.0-0.9%, at or below each set's own null. This does not separate a contaminated beam from a crystal whose true cell is three times the one indexed; the arithmetic is identical. What separates them is where the population stops, so the apparent resolution of the hits is reported beside their number and the prose names the alternative. Report-only: nothing downstream reads it, and no spot is treated differently for it. Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_011GxZqDiFP3KqriBhNdcR56
Jungfraujoch
Application to receive data from the PSI JUNGFRAU and EIGER detectors.
All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.