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Author	SHA1	Message	Date
mazzol_a	c0ee17275e	Bug/aare file reading (#230) ... MasterFile supports reading new json file format (backwards compatible for older versions) Multiple ROI's not supported yet	2025-10-02 10:05:11 +02:00
mazzol_a	ad3ef88607	changed default DAC value in ScanParameters	2025-10-01 20:37:40 +02:00
mazzol_a	f814b3f4e7	updated release notes	2025-10-01 20:30:25 +02:00
mazzol_a	1f46266183	clang-format	2025-10-01 20:25:27 +02:00
mazzol_a	d3d9f760b3	updated parse_json to parse new master json file	2025-10-01 20:17:37 +02:00
mazzol_a	0891ffb1ee	compile with POSITION_INDEPENDANT_CODE=On (#228) ... The python bindings build a shared library and I cant link against static libraries. Apparently I have to build with CMAKE_POSITION_INDEPENDANT_CODE=On.	2025-09-30 17:39:43 +02:00
mazzol_a	0b74bc25d5	enabled position independant code only for aare_core	2025-09-30 16:29:42 +02:00
maliakal_d	3ec40fa809	Merge branch 'main' into fix/cmake_fix_compile_width_position_independent_code	2025-09-30 10:58:35 +02:00
mazzol_a	74280379ce	naive implementation of 3x3 and 5x5 reduction (#210) ... - Still quite far from a state where it can be merged - Reduce 5x5 to 3x3 - Reduce 3x3 to 2x2 Open issues: - [ ] Can we generalize it? - [ ] Which reductions are needed - [ ] Naming	2025-09-09 09:08:42 +02:00
mazzol_a	474c35cc6b	Merge branch 'main' into dev/reduce	2025-09-08 15:39:27 +02:00
mazzol_a	e2a97d3c45	General reduce (#223) ... Generalized reduction to 3x3 and 3x3 clusters for general sized clusters.	2025-09-08 15:22:03 +02:00
mazzol_a	bce8e9d5fc	Merge branch 'main' into fix/cmake_fix_compile_width_position_independent_code	2025-09-05 14:11:33 +02:00
mazzol_a	4c1e276e2c	compile with POSITION_INDEPENDANT_CODE=On	2025-09-05 14:02:26 +02:00
mazzol_a	12114e7275	added documentation	2025-09-01 15:29:58 +02:00
mazzol_a	7926993bb2	reduction tests for python	2025-09-01 14:15:08 +02:00
mazzol_a	ed7fb1f1f9	induce the cluster size of ClusterCollector from ClusterFinderMT - ha… (#225) ... In ClusterCollector induces cluster size from passed ClusterFinderMT.	2025-08-26 09:30:56 +02:00
Erik Fröjdh	8ab98b356b	Merge branch 'main' into fix/saverio_cluster_finder	2025-08-25 09:26:09 +02:00
mazzol_a	d908ad3636	removed option to give clustersize	2025-08-22 15:25:15 +02:00
mazzol_a	8733a1d66f	added benchmark	2025-08-22 15:14:05 +02:00
mazzol_a	437f7cec89	induce the cluster size of ClusterCollector from ClusterFinderMT - handle backwards compatibility	2025-08-22 10:08:38 +02:00
Erik Fröjdh	6c3524298f	bumped version for release 2025.8.22	2025-08-22 09:52:24 +02:00
mazzol_a	b59277c4bf	3x3 reduction for general cluszter sizes	2025-08-19 12:37:55 +02:00
mazzol_a	cb163c79b4	reduction to 2x2 clusters for general clusters	2025-08-18 18:23:15 +02:00
Erik Fröjdh	a0fb4900f0	Update RELEASE.md	2025-08-18 12:16:44 +02:00
Erik Fröjdh	91d74110fa	specified glibc in conda build (#222) ... Fixed a runtime error on older linux systems, since by mistake we used glibc from ubutu 24. Same code as in slsDetectorPackage now.	2025-08-18 12:14:54 +02:00
mazzol_a	f54e76e6bf	view is only allowed on l-value frame (#220) ... Vadym accidentally called view() directly on an R-value frame, which leads to a dangling view pointer. Adjusted code such that compiler throws an error if called on an R-value frame. Co-authored-by: Erik Fröjdh <erik.frojdh@psi.ch>	2025-08-18 11:02:05 +02:00
JFMulvey	c6da36d10b	Fixed the order of cluster.data being incorrect (#221) ... While using the cluster finder and saving a cluster, pixels which are out of bounds are skipped. cluster.data should contain the pedestal corrected ADU information of each pixel. However, the counter "i" which keeps track of the position of cluster.data is only incremented if the pixel was inside the bounds of the frame. This means that any clusters close to the frame's edges are not construed properly. This means that if you want to extract a 3x3 from a 9x9 cluster, it can fail if the cluster data is not properly centered in the pixel. Fixed by moving i++ outside the bounds check. Co-authored-by: Jonathan Mulvey <jonathan.mulvey@psi.ch>	2025-08-14 09:27:02 +02:00
mazzol_a	5107513ff5	Pedestal, calibration in g0 and counting pixels (#217) ... - NDView operator()(size_t) now returns a view with one less dimension - Apply calibration takes also a 2D array and then ignores pixels that switch - Calculate pedestal from a dataset which contains all three gains - G0 variant of pedestal - Function to count pixels switching	2025-07-25 13:50:53 +02:00
mazzol_a	f7aa66a2c9	templated calculate_pedestal with boolean template argument only_gain… (#218) ... some refactoring for less code duplication, added functionality drop_dimension in NDArray	2025-07-25 12:25:41 +02:00
mazzol_a	3ac94641e3	Move constructor to drop 1st dimension of NDArray (#219) ... - helper function to initialize shape - helper function to calculate the number of elements - move constructor to create a NDArray<T, Ndim-1> if sizes match	2025-07-25 12:03:42 +02:00
froejdh_e	89bb8776ea	check Ndim on drop_first_dim	2025-07-25 11:44:27 +02:00
Erik Fröjdh	1527a45cf3	Merge branch 'template_on_gain0' into dev/move_dim	2025-07-25 10:45:20 +02:00
froejdh_e	3d6858ad33	removed data_ref	2025-07-25 10:42:47 +02:00
froejdh_e	d6222027d0	move constructor for Ndim-1	2025-07-25 10:40:32 +02:00
mazzol_a	1195a5e100	added drop dimension test, added file calibration.test.cpp	2025-07-25 10:18:55 +02:00
mazzol_a	1347158235	templated calculate_pedestal with boolean template argument only_gain0, added drop_dimension to NDArray and reference pointer to data	2025-07-24 15:40:05 +02:00
froejdh_e	8c4d8b687e	using make_subview	2025-07-24 12:16:08 +02:00
froejdh_e	b8e91d0282	zero out switching pixels if 2D calibration is used	2025-07-24 12:10:13 +02:00
froejdh_e	46876bfa73	reduced duplicate code	2025-07-24 10:57:02 +02:00
froejdh_e	348fd0f937	removed unused code	2025-07-24 10:14:29 +02:00
froejdh_e	0fea0f5b0e	added safe_divide to NDArray and used it for pedestal	2025-07-24 09:40:38 +02:00
Erik Fröjdh	cb439efb48	added tests	2025-07-23 11:34:47 +02:00
Erik Fröjdh	5de402f91b	added docs	2025-07-23 11:05:44 +02:00
froejdh_e	9a7713e98a	added g0 calibration, pedestal and pixel counting	2025-07-22 16:42:09 +02:00
froejdh_e	b898e1c8d0	date also in release 2025.7.18	2025-07-18 10:23:17 +02:00
froejdh_e	4073c0cbe0	bumped version	2025-07-18 10:21:28 +02:00
Erik Fröjdh	9a3694b980	Merge branch 'main' into dev/reduce	2025-07-18 10:19:42 +02:00
Erik Fröjdh	abae2674a9	Apply calibration to Jungfrau raw data (#216) ... - Added function to read calibration file - Multi threaded pedestal subtraction and application of the calibration	2025-07-18 10:19:14 +02:00
maliakal_d	1414d75320	fix/mh02 map (#214) ... - Fixed bug in reading MH02 files	2025-07-17 15:32:40 +02:00
Erik Fröjdh	85c3bf7bed	Merge branch 'main' into dev/reduce	2025-07-16 17:04:23 +02:00