160 Commits

Author	SHA1	Message	Date
Erik Fröjdh	9bf21244b0	added custom io for my302	2025-11-27 17:17:43 +01:00
AliceMazzoleni99	6f7cb4ae30	Merge branch 'main' into dev/license	2025-11-21 14:52:54 +01:00
AliceMazzoleni99	267ca87ab0	Dev/rosenblatttransform (#241) ... - added rosenblatttransform - added 3x3 eta methods - interpolation can be used with various eta functions - added documentation for interpolation, eta calculation - exposed full eta struct in python - disable ClusterFinder for 2x2 clusters - factory function for ClusterVector --------- Co-authored-by: Dhanya Thattil <dhanya.thattil@psi.ch> Co-authored-by: Erik Fröjdh <erik.frojdh@psi.ch>	2025-11-21 14:48:46 +01:00
Erik Fröjdh	200ae91622	also hpp	2025-11-21 10:14:14 +01:00
Erik Fröjdh	53aed8d8c6	added license	2025-11-20 09:01:28 +01:00
AliceMazzoleni99	8989d2eb4a	Merge branch 'main' into dev/expose_sum_2x2_to_python	2025-10-27 19:47:09 +01:00
Erik Fröjdh	ac83eeff9b	added tell and better error checking to cluster file (#239) ... - Check feof and ferror when reading frames - added tell member function to ClusterFile	2025-10-27 15:46:31 +01:00
Alice	df7b9be5a5	added docstrings wrap struct into tuple	2025-10-23 19:16:33 +02:00
Alice	dbffea15c0	fix: included deleted file	2025-10-23 17:50:17 +02:00
Alice	73e8fd31c9	vector class no longer needed	2025-10-23 17:36:29 +02:00
Alice	01fa61cf47	index now returns enum type	2025-10-23 17:34:54 +02:00
Alice	790dd63ba3	make max_sum_2x2 properly accessible from python	2025-10-23 15:00:52 +02:00
Alice	516ef88d10	adresses SonarQube comments	2025-10-08 18:19:17 +02:00
Alice	5329be816e	removed times 2 in calculated photon center distance	2025-10-08 17:01:38 +02:00
Alice	72a2604ca5	test for interpolation with simulated normal energy distribution	2025-10-08 16:35:52 +02:00
Alice	c78a73ebaf	changed default CoordType in Cluster constructor in python bindings to uint16_t	2025-10-07 16:49:06 +02:00
Alice	474c35cc6b	Merge branch 'main' into dev/reduce	2025-09-08 15:39:27 +02:00
Alice	12114e7275	added documentation	2025-09-01 15:29:58 +02:00
Alice	7926993bb2	reduction tests for python	2025-09-01 14:15:08 +02:00
Alice	d908ad3636	removed option to give clustersize	2025-08-22 15:25:15 +02:00
Alice	437f7cec89	induce the cluster size of ClusterCollector from ClusterFinderMT - handle backwards compatibility	2025-08-22 10:08:38 +02:00
Alice	b59277c4bf	3x3 reduction for general cluszter sizes	2025-08-19 12:37:55 +02:00
Alice	cb163c79b4	reduction to 2x2 clusters for general clusters	2025-08-18 18:23:15 +02:00
Alice	1347158235	templated calculate_pedestal with boolean template argument only_gain0, added drop_dimension to NDArray and reference pointer to data	2025-07-24 15:40:05 +02:00
Erik Fröjdh	cb439efb48	added tests	2025-07-23 11:34:47 +02:00
Erik Fröjdh	5de402f91b	added docs	2025-07-23 11:05:44 +02:00
froejdh_e	9a7713e98a	added g0 calibration, pedestal and pixel counting	2025-07-22 16:42:09 +02:00
Erik Fröjdh	9a3694b980	Merge branch 'main' into dev/reduce	2025-07-18 10:19:42 +02:00
Erik Fröjdh	abae2674a9	Apply calibration to Jungfrau raw data (#216) ... - Added function to read calibration file - Multi threaded pedestal subtraction and application of the calibration	2025-07-18 10:19:14 +02:00
froejdh_e	5a9c3b717e	naive implementation of 3x3 and 5x5 reduction	2025-06-27 16:36:21 +02:00
Erik Fröjdh	6ec8fbee72	migrated tags for tests and added missing raw files (#206) ... - No changes or evaluation of existing tests - Tags for including tests that require data is changed to **[.with-data]** and **--with-data** for C++ and python respectively - Minor update to docs - Added missing files to the test data repo	2025-06-26 17:11:20 +02:00
Alice	ff7312f45d	replaced fmt with LOG	2025-06-24 16:24:25 +02:00
Alice	c92be4bca2	added eiger quad test	2025-06-24 11:29:25 +02:00
Erik Fröjdh	64438c8803	Merge branch 'main' into dev/fix/rawfilereader_with_roi	2025-06-23 08:21:39 +02:00
Alice	9f8eee5d08	fixed python bindings - only read headers of modules that are in the roi	2025-06-16 11:07:00 +02:00
Alice	b13f864b2b	need n_modules	2025-06-13 17:01:13 +02:00
Alice	05828baa54	removed n_modules from python bindings	2025-06-13 16:38:46 +02:00
Erik Fröjdh	11fa95b23c	Improved documentation for ClusterFile on the python side (#201) ... - Fixed CI job not doing python docs - added more docs on cluster file - fixed generating docs on cluster vector	2025-06-13 10:41:39 +02:00
Erik Fröjdh	4976ec1651	added back chunk_size in python (#199) ... When refactoring the dispatch of the python binding for ClusterFile I forgot chunk_size. Adding it back in. Excluded from release notes since the bug was introduced after the last release and now fixed before the next release. 1. added back chunk_size 2. removed a few commented out lines closes #197	2025-06-12 09:32:42 +02:00
Alice	19ecc82fff	solved merge conflict	2025-06-10 17:01:40 +02:00
Alice	f9751902a2	formatted main branch	2025-06-10 16:09:06 +02:00
Alice	923f7d22b8	Merge branch 'main' into dev/fix/rawfilereader_with_roi	2025-06-10 15:59:52 +02:00
Alice	6438a4bef1	updated python bindings	2025-06-10 12:00:07 +02:00
Erik Fröjdh	1bc2fd770a	Binding 5x5, 7x7 and 9x9 clusters in python (#188) ... - New binding code with macros to bind all cluster templates - Simplified factory function on the python side - 5x5, 7x7 and 9x9 bindings in python	2025-06-05 08:57:59 +02:00
Erik Fröjdh	69964e08d5	Refactor cluster bindings (#185) ... - Split up the file for cluster bindings - new file names according to bind_ClassName.hpp	2025-06-03 08:43:40 +02:00
froejdh_e	9ecf4f4b44	merge	2025-05-22 11:23:57 +02:00
Erik Fröjdh	9e1b8731b0	RawSubFile support multi file access (#173) ... This PR is a fix/improvement to a problem that Jonathan had. (#156) The original implementation opened all subfiles at once witch works for normal sized datasets but fails at a certain point (thousands of files). - This solution uses RawSubFile to manage the different file indicies and only opens the file we need - Added logger.h from slsDetectorPackage for debug printing (in production no messages should be visible)	2025-05-22 11:00:03 +02:00
Erik Fröjdh	cf158e2dcd	Added scurve fitting (#168) ... - added scurve fitting with two different signs (scurve, scurve2) - at the moment no option to set initial parameters --------- Co-authored-by: JulianHeymes <julian.heymes@psi.ch>	2025-05-05 11:40:04 +02:00
Erik Fröjdh	12ae1424fb	consistent use of ssize_t instead of int64_t (#167) ... - Consistent use of ssize_t to avoid issues on 32 bit platforms and also mac with (long long int as ssize_t)	2025-04-25 15:52:02 +02:00
mazzol_a	eb6862ff99	changed name of GainMap to InvertedGainMap	2025-04-25 12:03:59 +02:00