Abe Levitan
8d589eef86
Merge branch 'master' of github.mit.edu:Scattering/CDTools
2020-01-25 19:01:11 -05:00
Abe Levitan
a1cca0dcea
misc updates
2020-01-25 19:01:03 -05:00
David Rower
7a243842b9
Fixing wrong theta convention in converter; fixing simple_ptycho bug in dictionary syntax
2020-01-23 17:20:25 -05:00
David Rower
d659f6cca1
Taking unecessary printing out of conversion function
2020-01-23 16:35:29 -05:00
David Rower
7f93bdcfd3
Putting start_time in right format
2020-01-23 16:13:49 -05:00
David Rower
486f58a86e
Fixed special case in get_entry_info function, adding metadata to sample in converteR
2020-01-23 11:53:07 -05:00
David Rower
2ad4a2a00c
Merge branch 'master' of github.mit.edu:Scattering/CDTools
2020-01-23 10:54:17 -05:00
David Rower
d4f9d5074c
First data converter!
2020-01-23 10:54:03 -05:00
Abraham Levitan
abdd0d6e1e
Update docs so that they can produce a latex/pdf version as well
2019-12-16 12:40:41 -05:00
David Rower
384ced5b00
Using $\mu instead of um for micrometers
2019-12-11 16:19:45 -05:00
David Rower
3cf44cff9f
using greek \mu instead of u for axis labels ;)
2019-12-09 19:14:08 -05:00
David Rower
51eae81ee2
Fixed logical bug in get_detector_geometry, enforcing PEP 257 docstring convention of using periods
2019-12-09 13:50:36 -05:00
David Rower
b5f78b47c7
add_detector now flexible for both CXI and CDTools basis conventions
2019-12-09 13:37:11 -05:00
David Rower
0cf106e769
Merge branch 'master' of github.mit.edu:Scattering/CDTools
2019-12-03 15:32:22 -05:00
David Rower
d330e1b84e
Only adjusting colorbar when array is not a constant array (for consistency between shots), and added right/left keys for moving between shots
2019-12-03 15:32:16 -05:00
Kiara Carloni
0b122b0aca
Add files via upload
...
debugging_mod contains the various functions used to interface with the debugging data, while vid_read has examples of how to use them. I'm still in the process of trying to fix the g2 correlation function.
2019-10-21 21:38:33 +00:00
David Rower
256142e2f6
Fixing typo in analysis function documentation
2019-10-10 11:53:12 -04:00
Abraham Levitan
f78a39daf5
add the test for simple_ptycho_model'
2019-10-07 15:44:17 -04:00
Abe Levitan
e71c266fe4
Update the ptycho dataset with the new, more sensible, approach
2019-10-05 09:30:26 -04:00
Abe Levitan
e987d40df8
Remove last of t.tensor usage from dataset loading
2019-10-04 17:00:43 -04:00
Abe Levitan
120e23ef15
Write the model and dataset tutorials, update the dependencies, and various small bug fixes
2019-10-04 16:53:22 -04:00
Abe Levitan
bc7caebdd9
Fix the damn dataset.inspect thing
2019-10-03 17:49:10 -04:00
David Rower
8197eed50e
Fixed merging conflict - log scale in ptycho_2d_dataset.py
2019-10-03 15:25:27 -04:00
David Rower
61f8bf733e
Fixed a few bugs, 1) Title of relative displacement plot no longer dissapears, 2) slider now updates on click event, also added titles for colorbars.
2019-10-03 15:22:53 -04:00
Abe Levitan
69be77cc09
Update installation instructions for simplicity and also fix the tests to reflect new usage
2019-10-02 15:56:48 -04:00
Abe Levitan
918cade834
Merge branch 'master' of github.mit.edu:Scattering/CDTools
2019-10-02 13:27:41 -04:00
Abe Levitan
f58f3cc2c5
misc small changes
2019-10-02 13:27:32 -04:00
David Rower
6ff321eebc
Typo in README
2019-09-24 17:46:03 -04:00
Abe Levitan
185fde27a0
More work on documentation
2019-09-11 17:56:54 -04:00
Abe Levitan
40998908f1
refactor datasets, wrote more docs, added one more test dataset
2019-09-09 14:16:42 -04:00
Abe Levitan
99d02f95cf
Finish fleshing out the examples
2019-09-04 18:23:34 -04:00
Abe Levitan
0377ea90be
Update README to account for presence of docs
2019-09-04 16:45:04 -04:00
Abe Levitan
5b521da557
Add the publishing script so we can publish the docs to github pages on the enterprise server
2019-09-04 16:37:30 -04:00
Abe Levitan
e80bf05f25
Further improve docs layout and add unfinished ptycho models to repo
2019-09-04 16:27:55 -04:00
Abe Levitan
de186592cb
Update the docstrings on all the tools files and start laying out the docs for real
2019-09-03 18:49:45 -04:00
Abe Levitan
1e3a98c599
Add and build tests for a Fourier Ring Correlation method
2019-08-17 10:39:35 -04:00
Abe Levitan
d2c07bf1ac
Add a tool to look at raw data
2019-08-15 12:16:43 -04:00
Abe Levitan
f769806e68
Lots of small changes
2019-08-15 11:14:20 -04:00
Abe Levitan
06ce14fac9
Fixed a small bug
2019-07-01 15:27:57 -04:00
Abe Levitan
fe1f4db0c6
Consistently get Bragg/specular geometry implemented across both models/datasets and dataloaders
2019-07-01 15:02:14 -04:00
Abraham Levitan
bf3e206bd9
Update the setup file and readme to have sane installation instructions
2019-06-28 23:48:39 -04:00
Abe Levitan
6b50e41614
Add some sensible examples
2019-06-28 16:01:53 -04:00
Abe Levitan
a2a07055c4
Add sim-to-dataset capability
2019-06-27 17:26:36 -04:00
Abe Levitan
f769f9e7ab
Start moving the example code to datasets which can fit on the git server
2019-06-26 17:47:09 -04:00
Abe Levitan
c246a5ed96
Added a diffraction pattern browser
2019-06-26 17:26:25 -04:00
Abe Levitan
c437f95a8e
Loveplotting!
2019-06-26 13:25:54 -04:00
Abe Levitan
8dc997ac4c
Change the way plots are defined for inspect in preparation for adding liveplotting
2019-06-26 12:24:13 -04:00
Abe Levitan
a09cd4b39e
Add ability to load/use Bragg geometry ptycho data, also add a 1D convolve to try with the terrible data from CSX
2019-05-22 20:20:43 -04:00
Abe Levitan
6471a17c34
Merge branch 'master' of github.mit.edu:Scattering/CDTools
2019-05-22 13:00:56 -04:00
Abe Levitan
2a2b6ee960
Add tool to restrict object support, plot a nanomap, and include mask on SHARP-style initialization
2019-05-22 13:00:52 -04:00