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2026-07-03 13:32:31 +02:00
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@@ -90,7 +90,7 @@ A __single projection__ is to be repeated use
To continue an __interrupted tomography scan__, run
`flomni.tomo_scan_resume()`
It picks up automatically from wherever the scan was interrupted, no need to look up the exact subtomogram/angle by hand.
It picks up automatically from wherever the scan was interrupted, no need to look up the exact subtomogram/angle by hand. Do not use this command when running from the tomo queuing system. Instead use `flomni.tomo_queue_execute()`.
Alternatively, the same kind of parameters used internally by `tomo_scan_resume()` can be given to `flomni.tomo_scan()` directly, e.g. to resume from a different point than where it actually stopped:
| tomo type | parameters and their defaults |
@@ -322,7 +322,7 @@ For the "8 sub-tomograms" mode, `flomni.tomo_parameters()` also offers a `zero_d
The parameters above can be used to __restart an interrupted acquisition__ manually, or - more conveniently - by running
`flomni.tomo_scan_resume()`
which reads the last recorded progress and resumes automatically at the exact point (subtomogram/angle, or projection for the golden ratio modes) the scan was interrupted at, without needing to look up the values by hand.
which reads the last recorded progress and resumes automatically at the exact point (subtomogram/angle, or projection for the golden ratio modes) the scan was interrupted at, without needing to look up the values by hand. When running from the tomo scan queuing system use `flomni.tomo_queue_execute()` instead!
In case of eight equally spaced sub-tomograms, an individual sub tomogram can be scanned by flomni.sub_tomo_scan(subtomo_number, start_angle). If the start angle is not specified, it will be computed depending on the subtomo_number, which is ranging from 1 to 8.