@@ -90,7 +90,7 @@ A __single projection__ is to be repeated use
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To continue an __interrupted tomography scan__, run
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`flomni.tomo_scan_resume()`
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It picks up automatically from wherever the scan was interrupted, no need to look up the exact subtomogram/angle by hand.
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It picks up automatically from wherever the scan was interrupted, no need to look up the exact subtomogram/angle by hand. Do not use this command when running from the tomo queuing system. Instead use `flomni.tomo_queue_execute()`.
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Alternatively, the same kind of parameters used internally by `tomo_scan_resume()` can be given to `flomni.tomo_scan()` directly, e.g. to resume from a different point than where it actually stopped:
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| tomo type | parameters and their defaults |
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@@ -322,7 +322,7 @@ For the "8 sub-tomograms" mode, `flomni.tomo_parameters()` also offers a `zero_d
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The parameters above can be used to __restart an interrupted acquisition__ manually, or - more conveniently - by running
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`flomni.tomo_scan_resume()`
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which reads the last recorded progress and resumes automatically at the exact point (subtomogram/angle, or projection for the golden ratio modes) the scan was interrupted at, without needing to look up the values by hand.
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which reads the last recorded progress and resumes automatically at the exact point (subtomogram/angle, or projection for the golden ratio modes) the scan was interrupted at, without needing to look up the values by hand. When running from the tomo scan queuing system use `flomni.tomo_queue_execute()` instead!
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In case of eight equally spaced sub-tomograms, an individual sub tomogram can be scanned by flomni.sub_tomo_scan(subtomo_number, start_angle). If the start angle is not specified, it will be computed depending on the subtomo_number, which is ranging from 1 to 8.
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