From da3d417e59ee7d723055a22aaff4e7a1392e1b7c Mon Sep 17 00:00:00 2001 From: x12sa Date: Fri, 3 Jul 2026 13:32:31 +0200 Subject: [PATCH] docs updated --- docs/user/ptychography/flomni.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/docs/user/ptychography/flomni.md b/docs/user/ptychography/flomni.md index ebee457..ab49836 100644 --- a/docs/user/ptychography/flomni.md +++ b/docs/user/ptychography/flomni.md @@ -90,7 +90,7 @@ A __single projection__ is to be repeated use To continue an __interrupted tomography scan__, run `flomni.tomo_scan_resume()` -It picks up automatically from wherever the scan was interrupted, no need to look up the exact subtomogram/angle by hand. +It picks up automatically from wherever the scan was interrupted, no need to look up the exact subtomogram/angle by hand. Do not use this command when running from the tomo queuing system. Instead use `flomni.tomo_queue_execute()`. Alternatively, the same kind of parameters used internally by `tomo_scan_resume()` can be given to `flomni.tomo_scan()` directly, e.g. to resume from a different point than where it actually stopped: | tomo type | parameters and their defaults | @@ -322,7 +322,7 @@ For the "8 sub-tomograms" mode, `flomni.tomo_parameters()` also offers a `zero_d The parameters above can be used to __restart an interrupted acquisition__ manually, or - more conveniently - by running `flomni.tomo_scan_resume()` -which reads the last recorded progress and resumes automatically at the exact point (subtomogram/angle, or projection for the golden ratio modes) the scan was interrupted at, without needing to look up the values by hand. +which reads the last recorded progress and resumes automatically at the exact point (subtomogram/angle, or projection for the golden ratio modes) the scan was interrupted at, without needing to look up the values by hand. When running from the tomo scan queuing system use `flomni.tomo_queue_execute()` instead! In case of eight equally spaced sub-tomograms, an individual sub tomogram can be scanned by flomni.sub_tomo_scan(subtomo_number, start_angle). If the start angle is not specified, it will be computed depending on the subtomo_number, which is ranging from 1 to 8.