 fische_r
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ead3eba3aa
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added full temporal mean as function, but not activated in the prepare()
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2023-02-13 16:29:08 +01:00 |
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 Fischer Robert
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84908c3795
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added pixel coordinate as feature
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2023-01-18 15:22:32 +01:00 |
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Fischer Robert
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ef919a2db3
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Merge branch 'master' of https://gitlab.psi.ch/fische_r/pytrainseg
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2023-01-17 14:04:52 +01:00 |
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Fischer Robert
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e42052328c
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local copy
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2023-01-17 14:04:33 +01:00 |
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Fischer Robert
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8c0cc68e57
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TODO: store git sha
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2022-10-13 15:13:18 +02:00 |
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Fischer Robert
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13f6fbfa2a
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worked around dask crashing/zombieing when fetching results
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2022-09-26 13:56:07 +02:00 |
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Fischer Robert
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193ca64faf
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some bug fixes, but not yet there
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2022-09-16 14:53:22 +02:00 |
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Fischer Robert
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942bad4eba
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training now working with very large datasets
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2022-09-06 16:03:02 +02:00 |
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Fischer Robert
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0633b8a129
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wpatched: when lazy cannot use originalà as reference for gauss with sig 0
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2022-09-05 11:02:58 +02:00 |
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Fischer Robert
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45f8074bbd
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making it fully lazy
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2022-09-01 17:33:22 +02:00 |
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Fischer Robert
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e77035eef5
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segmenting lines for wood
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2022-08-24 15:50:23 +02:00 |
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Fischer Robert
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ca7f6b0677
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worked again with wood
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2022-08-24 15:08:23 +02:00 |
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Fischer Robert
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966af5bfaf
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update
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2022-08-22 08:55:49 +02:00 |
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Fischer Robert
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d44ab4c143
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looks ok
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2022-08-18 17:12:37 +02:00 |
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Fischer Robert
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c350295d5c
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works neatly
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2022-08-18 16:20:56 +02:00 |
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Fischer Robert
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44abe23af1
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I think I have all
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2022-08-18 14:57:21 +02:00 |
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Fischer Robert
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6630acfedc
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got it running, now allow clf savinf and full segmentation
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2022-08-18 11:40:45 +02:00 |
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fische_r
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c48bdb1174
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put all together, but ipycanvas not working on laptop
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2022-08-18 11:06:46 +02:00 |
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fische_r
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c8e40e4510
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started training part
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2022-08-17 17:10:25 +02:00 |
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Fischer Robert
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8b9b292458
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add notebook to test dask
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2022-08-17 14:08:54 +02:00 |
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fische_r
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e9a9442556
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bug with range elemnt in Hessian
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2022-08-17 14:06:10 +02:00 |
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fische_r
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cdd74c6d62
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messed up with gauss 4d dict name
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2022-08-17 14:04:51 +02:00 |
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fische_r
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88fa3b8848
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forgot combinations in gauss diff
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2022-08-17 14:03:25 +02:00 |
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fische_r
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5ae07895f3
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check diff gauss later
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2022-08-17 14:03:07 +02:00 |
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fische_r
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101ddff092
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forgot combinations in gauss diff
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2022-08-17 14:01:30 +02:00 |
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fische_r
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fe3648e6a6
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inlcuded all? filters?
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2022-08-17 13:58:28 +02:00 |
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fische_r
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e8012344f7
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inlcuded all? filters?
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2022-08-17 13:56:11 +02:00 |
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fische_r
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2cbd888c89
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saving ok, filling up filters
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2022-08-17 10:46:18 +02:00 |
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fische_r
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86dc75b727
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fixed some stuff
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2022-08-17 08:59:14 +02:00 |
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fische_r
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a38047b357
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removed dask rename, find other way
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2022-08-16 16:46:13 +02:00 |
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fische_r
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7c3a99218c
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added local dask cluster
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2022-08-16 16:14:36 +02:00 |
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fische_r
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f8eba110cc
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ready to test?!
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2022-08-16 15:59:16 +02:00 |
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fische_r
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83f1698fcf
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build into a class hopefully using an efficient dask tree
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2022-08-16 15:40:44 +02:00 |
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Fischer Robert
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c48e48c6c5
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added plotting
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2022-08-15 16:17:07 +02:00 |
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Fischer Robert
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85e4f66d8f
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test on full volume of jeremy's data, no data streaming yet necessary
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2022-08-15 14:58:03 +02:00 |
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Fischer Robert
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dbf02fc03e
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pretty decent for Jeremy's data
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2022-08-12 10:41:53 +02:00 |
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Fischer Robert
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41ed977005
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not yet working for wood (swelling), needs some sort of time space/correlation
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2022-08-12 10:40:51 +02:00 |
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Fischer Robert
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94a0903624
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TODO: function to load label images, clever filters
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2022-08-11 17:26:46 +02:00 |
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Fischer Robert
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1710a8b5f5
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works better now, inlcude average/max Hessian
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2022-08-10 16:51:26 +02:00 |
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Fischer Robert
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636b3d195e
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added anisotropic time filtering
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2022-08-10 15:06:05 +02:00 |
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Fischer Robert
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5f9e341055
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wood segmentation not good for fiber/water long time after filling
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2022-08-10 10:47:32 +02:00 |
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Fischer Robert
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4e4a320246
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very good on interlaces
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2022-08-10 10:45:51 +02:00 |
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Fischer Robert
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06f71cdf1f
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testing segmentation of yarns, try also on wood
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2022-08-09 11:04:34 +02:00 |
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Fischer Robert
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035ffc472f
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saving segmented data
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2022-08-08 16:31:59 +02:00 |
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Fischer Robert
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cd4282ceac
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Merge branch 'master' of https://gitlab.psi.ch/fische_r/pytrainseg
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2022-08-08 16:27:43 +02:00 |
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Fischer Robert
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b16f4adbee
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testing clf saving and application
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2022-08-08 16:27:20 +02:00 |
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Fischer Robert
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7cf38a21ac
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last saved version before quota issue
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2022-08-08 15:28:34 +02:00 |
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Fischer Robert
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45bea73937
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hopefully saved all changes from new WS maunally
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2022-08-08 15:22:30 +02:00 |
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Fischer Robert
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ebac638269
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inlcuded image gradient to features
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2022-08-05 16:45:09 +02:00 |
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Fischer Robert
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da84c5924a
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full workflow to be tested
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2022-08-05 13:43:51 +02:00 |
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