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Merge branch 'Changes_as_we_just_discussed' into 'main'

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changes_from_meeting

See merge request apog/acsmnode!2
This commit is contained in:
florez_j
2025-01-31 09:26:23 +01:00
parent f1fe9cb1f9 53463a2f8e
commit 7e86a4225e
1 changed files with 39 additions and 28 deletions
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67
pipelines/params/calibration_factors.yaml
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@ -6,6 +6,11 @@ ABRefWave_tofware: &ABRefWave 254000
RIE_SO4_tofware: &RIE_SO4 0.63
RIE_NH4_tofware: &RIE_NH4 3.495
RIE_Org_tofware: &RIE_Org 1.4
RIE_NO3_tofware: &RIE_NO3 1.05
RIE_Chl_tofware: &RIE_Chl 1.0
CE_tofware: &CE 1.0
flow_ref_tofware: &flow_ref 1.36
# Get values from data/<station>/<year>/cal.csv
IE_correct: &IE_correct 145.9
@ -13,86 +18,92 @@ AB_ref_correct: &AB_ref_correct 254000
RIE_SO4_correct: &RIE_SO4_correct 0.63
RIE_NH4_correct: &RIE_NH4_correct 3.495
RIE_Org_correct: &RIE_Org_correct 1.4
RIE_NO3_correct: &RIE_NO3_correct 1.05
RIE_Chl_correct: &RIE_Chl_correct 1.0
CE_correct: &CE_correct 1.0
flow_ref_correct: &flow_ref_correct 1.36
# Define mappings for associated variables
variables:
# all_dat[, NO3_correct := (NO3_11000 * IE * AB_ref_correct) / (IE_correct * ABRefWave)]
NO3_11000:
num: [*IE, *AB_ref_correct]
den: [*IE_correct, *ABRefWave]
num: [*IE, *RIE_NO3, *AB_ref_correct, *CE]
den: [*IE_correct, *RIE_NO3_correct, *ABRefWave, *CE_correct]
# all_dat[, SO4_correct := (SO4_11000 * IE * RIE_SO4 * AB_ref_correct) / (IE_correct * RIE_SO4_correct * ABRefWave)]
SO4_11000:
num: [*IE, *RIE_SO4, *AB_ref_correct]
den: [*IE_correct, *RIE_SO4_correct, *ABRefWave]
num: [*IE, *RIE_SO4, *AB_ref_correct, *CE]
den: [*IE_correct, *RIE_SO4_correct, *ABRefWave, *CE_correct]
# all_dat[, NH4_correct := (NH4_11000 * IE * RIE_NH4 * AB_ref_correct) / (IE_correct * RIE_NH4_correct * ABRefWave)]
NH4_11000:
num: [*IE, *RIE_NH4, *AB_ref_correct]
den: [*IE_correct, *RIE_NH4_correct, *ABRefWave]
num: [*IE, *RIE_NH4, *AB_ref_correct, *CE]
den: [*IE_correct, *RIE_NH4_correct, *ABRefWave, *CE_correct]
# all_dat[, Org_correct := (Org_11000 * IE * AB_ref_correct) / (IE_correct * ABRefWave)]
Org_11000:
num: [*IE, *AB_ref_correct]
den: [*IE_correct, *ABRefWave]
num: [*IE, *RIE_Org, *AB_ref_correct, *CE]
den: [*IE_correct, *RIE_Org_correct, *ABRefWave, *CE_correct]
# all_dat[, Chl_correct := (Chl_11000 * IE * AB_ref_correct) / (IE_correct * ABRefWave)]
Chl_11000:
num: [*IE, *AB_ref_correct]
den: [*IE_correct, *ABRefWave]
num: [*IE, *RIE_Chl, *AB_ref_correct, *CE]
den: [*IE_correct, *RIE_Chl_correct, *ABRefWave, *CE_correct]
# m/z levels columns are treated differently to those above
# all_dat[, Org_44_11000_correct := (Org_44_11000 * IE * AB_ref_correct) / (IE_correct * ABRefWave)]
Org_44_11000:
num: [*IE, *AB_ref_correct]
den: [*IE_correct, *ABRefWave]
num: [*IE, *RIE_Org, *AB_ref_correct, *CE]
den: [*IE_correct, *RIE_Org_correct, *ABRefWave, *CE, *RIE_Org, *CE_correct]
# all_dat[, Org_43_11000_correct := (Org_43_11000 * IE * AB_ref_correct) / (IE_correct * ABRefWave)]
Org_43_11000:
num: [*IE, *AB_ref_correct]
den: [*IE_correct, *ABRefWave]
num: [*IE, *RIE_Org, *AB_ref_correct, *CE]
den: [*IE_correct, *RIE_Org_correct, *ABRefWave, *CE, *RIE_Org, *CE_correct]
# all_dat[, Org_60_11000_correct := (Org_60_11000 * IE * AB_ref_correct) / (IE_correct * ABRefWave)]
Org_60_11000:
num: [*IE, *AB_ref_correct]
den: [*IE_correct, *ABRefWave]
num: [*IE, *RIE_Org, *AB_ref_correct, *CE]
den: [*IE_correct, *RIE_Org_correct, *ABRefWave, *CE, *RIE_Org, *CE_correct]
# all_dat[, NO3_30_11000_correct := (NO3_30_11000 * IE * AB_ref_correct) / (IE_correct * ABRefWave)]
NO3_30_11000:
num: [*IE, *AB_ref_correct]
den: [*IE_correct, *ABRefWave]
num: [*IE, *RIE_NO3, *AB_ref_correct, *CE]
den: [*IE_correct, *RIE_NO3_correct, *ABRefWave, *CE, *RIE_NO3, *CE_correct]
# all_dat[, SO4_98_11000_correct := (SO4_98_11000 * IE * RIE_SO4 * AB_ref_correct) / (IE_correct * RIE_SO4_correct * ABRefWave)]
SO4_98_11000:
num: [*IE, *RIE_SO4, *AB_ref_correct]
den: [*IE_correct, *RIE_SO4_correct, *ABRefWave]
num: [*IE, *RIE_SO4, *AB_ref_correct, *CE]
den: [*IE_correct, *RIE_SO4_correct, *ABRefWave, *CE, *RIE_SO4, *CE_correct]
# all_dat[, SO4_81_11000_correct := (SO4_81_11000 * IE * RIE_SO4 * AB_ref_correct) / (IE_correct * RIE_SO4_correct * ABRefWave)]
SO4_81_11000:
num: [*IE, *RIE_SO4, *AB_ref_correct]
den: [*IE_correct, *RIE_SO4_correct, *ABRefWave]
num: [*IE, *RIE_SO4, *AB_ref_correct, *CE]
den: [*IE_correct, *RIE_SO4_correct, *ABRefWave, *CE, *RIE_SO4, *CE_correct]
# all_dat[, SO4_82_11000_correct := (SO4_82_11000 * IE * RIE_SO4 * AB_ref_correct) / (IE_correct * RIE_SO4_correct * ABRefWave)]
SO4_82_11000:
num: [*IE, *RIE_SO4, *AB_ref_correct]
den: [*IE_correct, *RIE_SO4_correct, *ABRefWave]
num: [*IE, *RIE_SO4, *AB_ref_correct, *CE]
den: [*IE_correct, *RIE_SO4_correct, *ABRefWave, *CE, *RIE_SO4, *CE_correct]
# all_dat[, SO4_62_11000_correct := (SO4_62_11000 * IE * RIE_SO4 * AB_ref_correct) / (IE_correct * RIE_SO4_correct * ABRefWave)]
SO4_62_11000:
num: [*IE, *RIE_SO4, *AB_ref_correct]
den: [*IE_correct, *RIE_SO4_correct, *ABRefWave]
num: [*IE, *RIE_SO4, *AB_ref_correct, *CE]
den: [*IE_correct, *RIE_SO4_correct, *ABRefWave, *CE, *RIE_SO4, *CE_correct]
# all_dat[, SO4_48_11000_correct := (SO4_48_11000 * IE * RIE_SO4 * AB_ref_correct) / (IE_correct * RIE_SO4_correct * ABRefWave)]
SO4_48_11000:
num: [*IE, *RIE_SO4, *AB_ref_correct]
den: [*IE_correct, *RIE_SO4_correct, *ABRefWave]
num: [*IE, *RIE_SO4, *AB_ref_correct, *CE]
den: [*IE_correct, *RIE_SO4_correct, *ABRefWave, *CE, *RIE_SO4, *CE_correct]