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18165eca1a
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Modified import statements to account for reader module's relocation.
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2024-08-23 13:27:26 +02:00 |
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15b76f7704
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Fixed a few import dependencies after relocating this file.
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2024-08-23 10:57:13 +02:00 |
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a0f44a1f4b
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Moved src/g5505_file_reader.py -> instruments/readers/g5505_file_reader.py to increase modularity with respect to new intrument additions.
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2024-08-23 10:11:29 +02:00 |
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1112a214e9
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Moved src/g5505_utils.py to utils/g5505_utils.py
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2024-08-23 07:27:39 +02:00 |
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d7fc38abd9
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Moved get_parent_relationships func into hdf5_vis.py and cleaned up unused import statements
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2024-08-22 09:50:26 +02:00 |
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05d1133e32
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Moved get_parent_child_relationships() funct from hdf5_lib.py tinto hdf5_vis.py to avoid circular dependency between the lower level and higher level module. Thus removed also src.hdf5_lib.py import statement.
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2024-08-22 09:47:57 +02:00 |
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d7c7808400
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Implemented method for appending new attributes to an specific object.
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2024-08-16 09:32:58 +02:00 |
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bb250e9940
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Implemented method to reformat a given column in a datatable holding datetime info into a desired datetime format. During data integration this will serve to normalize datatime formats across data tables
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2024-08-16 08:08:28 +02:00 |
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062a688f47
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Added method to reformat columns containing datetime byte strings into a desired datetime formated object
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2024-08-14 16:22:28 +02:00 |
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5124df14d8
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Changed link to descriptions according to new instrument folder location.
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2024-08-12 13:40:43 +02:00 |
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c876e925a7
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Modified code to point to new instrument folders location. Also, upgrated code to accept either a user specified location or the default location
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2024-08-12 13:40:01 +02:00 |
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7f0e5384ea
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Moved instruments folder outside src/.
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2024-08-12 10:09:21 +02:00 |
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18aba8d0d3
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Implemented dataset append method in HDF5DatOpsAPI
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2024-08-09 15:25:09 +02:00 |
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5fe7fc4b70
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Developed a class to manage data operations on a given hdf5 file
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2024-08-09 13:23:54 +02:00 |
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8f7f14ab68
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Removed time stamp configuration attributes from ACSM_TOFWARE, because it can be messy for a configuration file.
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2024-08-08 11:24:41 +02:00 |
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74db800e01
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Updated file with new instrument configuration ACSM.
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2024-08-07 16:38:52 +02:00 |
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ae1e3bfc23
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Moved ext_to_reader_dict to g5505_file_reader.py and replaced redear selection based on g5505_reader.select_file_reader(hdf5_file_path).
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2024-08-07 16:30:36 +02:00 |
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4e669b3eee
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Moved hdf5_file_path to file reader mapping and extension definitions to g5505_file_reader_module.py. Created functions to compute file_reader key from path to file in the hdf5 file and select the reader based on the key. This should enable more modular file reader selection.
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2024-08-07 16:21:22 +02:00 |
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3430627494
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Modified reader to output table_preamble as a dataset as opposed to attributes of the file. I believe this is better for readability of the metadata given that those preambles can sometimes contain large ammounts of text.
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2024-08-02 14:37:06 +02:00 |
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4e584b9d90
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Modified .yaml config files to satisty metadata naming expectations.
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2024-07-17 08:50:24 +02:00 |
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938e8e50a1
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Changed names of expected root level metadata attributes.
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2024-07-17 08:48:47 +02:00 |
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a06e28291c
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Added attribution insertion order tracking at the root level and reorganized a few import statements.
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2024-07-17 08:41:40 +02:00 |
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2ebe5f3220
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Made edits to documentation
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2024-07-11 13:42:38 +02:00 |
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f04f5eaaf9
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Robustified column name to description assigment, however it may be a bit slower than before.
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2024-07-10 13:31:47 +02:00 |
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5c6fcabf91
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Updated the yaml instrument descriptions.
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2024-07-10 13:29:14 +02:00 |
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73beb83278
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Moved parse_attribute() from ..review_lib.py into ...utils.py and backpropagate (refactored) changes to respective modules.
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2024-07-10 11:32:00 +02:00 |
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2ce925735d
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Modified return datetime output to a format without colons, which could be problematic for filenaming.
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2024-07-10 09:47:56 +02:00 |
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0a0b4ac41d
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Moved a few functions from ...reader.py and hdf5_lib.py into ..utils.py, and refactored accordingly.
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2024-07-10 09:19:30 +02:00 |
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0c74c52e09
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Removed smogchamber reader because its funtionality is now integrated into g5505_file_reader.py.
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2024-07-09 16:13:01 +02:00 |
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afc6c93823
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Removed non utilized code.
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2024-07-08 15:29:13 +02:00 |
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cb7d914908
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Cleaned code and modified def create_hdf5_file_from_dataframe to create group hierichy implicitly from path rather than recursively.
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2024-07-08 15:24:48 +02:00 |
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92eca4d79e
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Moved remaining git operations in metadata_review_lib.py to git_ops.py and refactored accoringly
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2024-07-05 15:46:20 +02:00 |
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77386432f8
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Merge branch 'main' of https://gitlab.psi.ch/5505/dima
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2024-07-02 16:50:08 +02:00 |
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177a5aa2a1
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Updated documentation.
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2024-07-02 16:49:48 +02:00 |
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ca8570b3b0
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Merge branch 'main' of https://gitlab.psi.ch/5505/dima
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2024-07-01 16:20:06 +02:00 |
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ba6d89d8e1
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Modified created at function to output date time and time zone
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2024-07-01 16:19:28 +02:00 |
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c074e45892
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Renamed script_name to processing_file.
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2024-07-01 16:17:25 +02:00 |
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b816e62f3b
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Made a few edits.
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2024-06-21 15:55:44 +02:00 |
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db199f81e0
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Merge branch 'main' of https://gitlab.psi.ch/5505/dima
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2024-06-21 15:42:46 +02:00 |
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6d6caf96db
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Cleared out outputs.
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2024-06-21 15:42:23 +02:00 |
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5ab775ecac
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Added a few root level metadata names and definitions
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2024-06-21 15:40:38 +02:00 |
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cedfe614e7
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Implemented input argument to enable append information to exisintg attributes, which must take the values of either strings or lists.
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2024-06-20 15:32:33 +02:00 |
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106795ae59
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Added a few lines to detect the existence of the file and change the file mode from 'w' to 'a' based on that information.
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2024-06-20 09:03:47 +02:00 |
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498a51cbc6
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Updated function to add project level metadata at the root group of the hdf5 file.
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2024-06-19 18:31:11 +02:00 |
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06c5c6d84b
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Incorporated method to MetadataHarvester class to collect project level metadata.
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2024-06-19 18:30:02 +02:00 |
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04558e7785
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Added code to parse dict attributes.
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2024-06-18 14:42:51 +02:00 |
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a6868d985d
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Fixed bug regarding datetime to str column conversion in dataframe by using .map(srt) (element wise operation) as opposed to .apply(str)
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2024-06-18 09:21:46 +02:00 |
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b66dc11a62
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Replaced applymap to .apply because the former is being depricated
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2024-06-17 13:47:54 +02:00 |
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ed1641af55
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Created function to save dataframes with annotations in hdf5 format
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2024-06-17 13:36:05 +02:00 |
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0eba80db41
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Added metadata printer method and rewrote slightly a few class terms.
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2024-06-17 08:44:44 +02:00 |
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