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Implemented input argument to enable append information to exisintg attributes, which must take the values of either strings or lists.

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florez_j
2024-06-20 15:32:33 +02:00
parent 106795ae59
commit cedfe614e7
1 changed files with 33 additions and 12 deletions
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45
src/metadata_review_lib.py
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@ -329,27 +329,48 @@ class MetadataHarvester:
"datasets": {}
}
def add_project_info(self, key_or_dict, value=None):
self._add_info("project", key_or_dict, value)
def add_project_info(self, key_or_dict, value=None, append=False):
self._add_info("project", key_or_dict, value, append)
def add_sample_info(self, key_or_dict, value=None):
self._add_info("sample", key_or_dict, value)
def add_sample_info(self, key_or_dict, value=None, append=False):
self._add_info("sample", key_or_dict, value, append)
def add_environment_info(self, key_or_dict, value=None):
self._add_info("environment", key_or_dict, value)
def add_environment_info(self, key_or_dict, value=None, append=False):
self._add_info("environment", key_or_dict, value, append)
def add_instrument_info(self, key_or_dict, value=None):
self._add_info("instruments", key_or_dict, value)
def add_instrument_info(self, key_or_dict, value=None, append=False):
self._add_info("instruments", key_or_dict, value, append)
def add_dataset_info(self, key_or_dict, value=None):
self._add_info("datasets", key_or_dict, value)
def add_dataset_info(self, key_or_dict, value=None, append=False):
self._add_info("datasets", key_or_dict, value, append)
def _add_info(self, category, key_or_dict, value):
def _add_info(self, category, key_or_dict, value, append):
"""Internal helper method to add information to a category."""
if isinstance(key_or_dict, dict):
self.metadata[category].update(key_or_dict)
else:
self.metadata[category][key_or_dict] = value
if key_or_dict in self.metadata[category]:
if append:
current_value = self.metadata[category][key_or_dict]
if isinstance(current_value, list):
if not isinstance(value, list):
# Append the new value to the list
self.metadata[category][key_or_dict].append(value)
else:
self.metadata[category][key_or_dict] = current_value + value
elif isinstance(current_value, str):
# Append the new value as a comma-separated string
self.metadata[category][key_or_dict] = current_value + ',' + str(value)
else:
# Handle other types (for completeness, usually not required)
self.metadata[category][key_or_dict] = [current_value, value]
else:
self.metadata[category][key_or_dict] = value
else:
self.metadata[category][key_or_dict] = value
def get_metadata(self):
return {