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Added code to parse dict attributes.

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This commit is contained in:
florez_j
2024-06-18 14:42:51 +02:00
parent a6868d985d
commit 04558e7785
1 changed files with 5 additions and 1 deletions
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6
src/hdf5_lib.py
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@ -481,7 +481,7 @@ import os
#import src.hdf5_lib as h5lib
import src.g5505_utils as utils
import h5py
import src.metadata_review_lib as metadata_lib
def save_processed_dataframe_to_hdf5(df, annotator, src_hdf5_path, script_date, script_name):
"""
Save processed dataframe columns with annotations to an HDF5 file.
@ -516,6 +516,10 @@ def save_processed_dataframe_to_hdf5(df, annotator, src_hdf5_path, script_date,
# Prepare data level attributes
data_level_attributes = metadata_dict['metadata']['datasets']
for key, value in data_level_attributes.items():
if isinstance(value,dict):
data_level_attributes[key] = metadata_lib.parse_attribute(value)
# Generate output filename
parent_file_name = os.path.split(src_hdf5_path)[1]
output_filename = f'data_products/processed/fig_{script_date}_{parent_file_name}'