Updating for version 0.5.2

Setting editor to CellEditor makes the column read-only for user even
if "editable=True" for the entire DataTable

pyzebra/__init__.py

@@ -5,4 +5,4 @@ from pyzebra.h5 import *
 from pyzebra.utils import *
 from pyzebra.xtal import *
 
-__version__ = "0.5.1"
+__version__ = "0.5.2"

pyzebra/app/panel_ccl_integrate.py

@@ -10,6 +10,7 @@ from bokeh.layouts import column, row
 from bokeh.models import (
     BasicTicker,
     Button,
+    CellEditor,
     CheckboxEditor,
     CheckboxGroup,
     ColumnDataSource,
@@ -326,9 +327,9 @@ def create():
     scan_table = DataTable(
         source=scan_table_source,
         columns=[
-            TableColumn(field="scan", title="Scan", width=50),
-            TableColumn(field="hkl", title="hkl", width=100),
-            TableColumn(field="fit", title="Fit", width=50),
+            TableColumn(field="scan", title="Scan", editor=CellEditor(), width=50),
+            TableColumn(field="hkl", title="hkl", editor=CellEditor(), width=100),
+            TableColumn(field="fit", title="Fit", editor=CellEditor(), width=50),
             TableColumn(field="export", title="Export", editor=CheckboxEditor(), width=50),
         ],
         width=310,  # +60 because of the index column
@@ -464,7 +465,7 @@ def create():
     fitparams_table = DataTable(
         source=fitparams_table_source,
         columns=[
-            TableColumn(field="param", title="Parameter"),
+            TableColumn(field="param", title="Parameter", editor=CellEditor()),
             TableColumn(field="value", title="Value", editor=NumberEditor()),
             TableColumn(field="vary", title="Vary", editor=CheckboxEditor()),
             TableColumn(field="min", title="Min", editor=NumberEditor()),

pyzebra/app/panel_hdf_param_study.py

@@ -10,6 +10,7 @@ from bokeh.models import (
     BasicTicker,
     BoxZoomTool,
     Button,
+    CellEditor,
     CheckboxGroup,
     ColumnDataSource,
     DataRange1d,
@@ -210,7 +211,7 @@ def create():
     scan_table = DataTable(
         source=scan_table_source,
         columns=[
-            TableColumn(field="file", title="file", width=150),
+            TableColumn(field="file", title="file", editor=CellEditor(), width=150),
             TableColumn(
                 field="param",
                 title="param",
@@ -218,9 +219,15 @@ def create():
                 editor=NumberEditor(),
                 width=50,
             ),
-            TableColumn(field="frame", title="Frame", formatter=num_formatter, width=70),
-            TableColumn(field="x_pos", title="X", formatter=num_formatter, width=70),
-            TableColumn(field="y_pos", title="Y", formatter=num_formatter, width=70),
+            TableColumn(
+                field="frame", title="Frame", formatter=num_formatter, editor=CellEditor(), width=70
+            ),
+            TableColumn(
+                field="x_pos", title="X", formatter=num_formatter, editor=CellEditor(), width=70
+            ),
+            TableColumn(
+                field="y_pos", title="Y", formatter=num_formatter, editor=CellEditor(), width=70
+            ),
         ],
         width=470,  # +60 because of the index column
         height=420,

pyzebra/app/panel_param_study.py

@@ -11,6 +11,7 @@ from bokeh.layouts import column, row
 from bokeh.models import (
     BasicTicker,
     Button,
+    CellEditor,
     CheckboxEditor,
     CheckboxGroup,
     ColumnDataSource,
@@ -494,10 +495,10 @@ def create():
     scan_table = DataTable(
         source=scan_table_source,
         columns=[
-            TableColumn(field="file", title="file", width=150),
-            TableColumn(field="scan", title="scan", width=50),
+            TableColumn(field="file", title="file", editor=CellEditor(), width=150),
+            TableColumn(field="scan", title="scan", editor=CellEditor(), width=50),
             TableColumn(field="param", title="param", editor=NumberEditor(), width=50),
-            TableColumn(field="fit", title="Fit", width=50),
+            TableColumn(field="fit", title="Fit", editor=CellEditor(), width=50),
             TableColumn(field="export", title="Export", editor=CheckboxEditor(), width=50),
         ],
         width=410,  # +60 because of the index column
@@ -624,7 +625,7 @@ def create():
     fitparams_table = DataTable(
         source=fitparams_table_source,
         columns=[
-            TableColumn(field="param", title="Parameter"),
+            TableColumn(field="param", title="Parameter", editor=CellEditor()),
             TableColumn(field="value", title="Value", editor=NumberEditor()),
             TableColumn(field="vary", title="Vary", editor=CheckboxEditor()),
             TableColumn(field="min", title="Min", editor=NumberEditor()),

pyzebra/ccl_process.py

@@ -147,6 +147,10 @@ def fit_scan(scan, model_dict, fit_from=None, fit_to=None):
 
     # apply fitting range
     fit_ind = (fit_from <= x_fit) & (x_fit <= fit_to)
+    if not np.any(fit_ind):
+        print(f"No data in fit range for scan {scan['idx']}")
+        return
+
     y_fit = y_fit[fit_ind]
     y_err = y_err[fit_ind]
     x_fit = x_fit[fit_ind]
@@ -201,6 +205,9 @@ def fit_scan(scan, model_dict, fit_from=None, fit_to=None):
 
 
 def get_area(scan, area_method, lorentz):
+    if "fit" not in scan:
+        return
+
     if area_method not in AREA_METHODS:
         raise ValueError(f"Unknown area method: {area_method}.")