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%% ------------------------------------------------------------------%
%% LANGUAGE, FONT, SIZE, GEOMETRY ENCODINGS
\usepackage[a4paper,
top=2cm,
bottom=2cm,
left=1.5cm,
right=1.5cm,
marginparwidth=1.75cm]{geometry} % Geometry
\usepackage[utf8]{inputenc}
\usepackage[T1]{fontenc}
\usepackage[english]{babel} % Language
\usepackage[german=swiss]{csquotes} % Quotation
\MakeAutoQuote{«}{»} % (Shift) + opt + ,
\usepackage{fontspec}
\usepackage{amsmath}
\usepackage{mathtools}
\usepackage[colon=literal]{unicode-math}
% Font Selection
\setmainfont{STIX Two Text}
\setmathfont{STIX Two Math}
\usepackage[skip=0pt, indent=0pt]{parskip}
\usepackage{enumitem}
%\setlength{\columnseprule}{0.5pt}
\setlength{\columnsep}{3em}
\setlist{leftmargin=1cm}
\renewcommand\labelitemi{--}
%% ------------------------------------------------------------------%
%% GRAPHICS PACKAGES
% graphics package and graphics paths
\usepackage{graphicx}
\graphicspath{{../graphics/charts/}{../graphics/postscript_figures/}{../graphics/raster_images/}{../config/logos/}{../config/titlepage/}}
%% ------------------------------------------------------------------%
%% PACKAGES
%\usepackage{amsfonts}
%\usepackage{amsmath}
%\usepackage{amssymb}
\usepackage{accents}
\usepackage{amsthm}
\usepackage{alphalph}
\usepackage[toc,page]{appendix}
\usepackage[affil-it]{authblk}
\usepackage[backend=biber,
style=authoryear,
citestyle=authoryear,
natbib,
maxcitenames=1,
maxbibnames=99,
doi=false,
isbn=false,
url=false,
eprint=false,
giveninits=true,
autocite=inline]{biblatex}
\usepackage{blindtext}
\usepackage{commath}
%\usepackage{dblfnote}
\usepackage{dirtree}
\usepackage{dirtytalk}
\usepackage{eso-pic}
\usepackage{etoolbox}
\usepackage{fancyhdr}
\usepackage{float}
\usepackage[record=hybrid, acronym, symbols, automake, indexcrossrefs=true, autoseeindex=true, stylemods={longextra}]{glossaries-extra}
\usepackage[colorlinks=true, linktoc=true, allcolors=black]{hyperref} % allcolors=black
\usepackage{imakeidx}
\usepackage{kantlipsum}
\usepackage{lastpage}
\usepackage[switch*, modulo]{lineno}
\usepackage{mathtools}
\usepackage[arrows=pgf-filled, version=4]{mhchem}
\usepackage{multicol}
\usepackage{nameref}
\usepackage{pdfpages}
\usepackage{pgfplots}
\usepackage{printlen}
\usepackage{setspace}
\usepackage[free-standing-units=true]{siunitx}
\usepackage[subrefformat=parens, labelformat=parens]{subcaption}
\renewcommand{\thesubfigure}{\alph{subfigure}}
\captionsetup[subfigure]{labelfont={normal, bf}}
\usepackage{scrwfile}
\usepackage{tabularray}
\usepackage{tikz}
\usepackage{tikz-3dplot}
\usepackage[breakable, many]{tcolorbox}
\usepackage[titles]{tocloft}
\usepackage{verbatim}
\usepackage{xcolor}
% Chemical equations and according setup: Needs to be loaded after \usepackage{mhchem}
\usepackage{chemmacros}
\chemsetup{
formula=mhchem,
reactions/tag-open=[R,
reactions/tag-close=]
}
\counterwithin{reaction}{section}
%% ------------------------------------------------------------------%
%% TITLE FORMAT
% Formatting author and affiliations
\renewcommand\Authfont{\Large\normalfont}
\renewcommand\Affilfont{\normalsize\normalfont}
\makeatletter
\renewcommand{\maketitle}{
\thispagestyle{empty}
\begin{minipage}[b]{0.3\textwidth}
\centering
\includegraphics[height=1.5cm]{ETH_Logo.pdf}
\end{minipage}
\hfill
\begin{minipage}[b]{0.3\textwidth}
\centering
\includegraphics[height=1.5cm]{iac_logo.pdf}
\end{minipage}
\hfill
\begin{minipage}[b]{0.3\textwidth}
\centering
\includegraphics[height=1.5cm]{PSI_Logo.pdf}
\end{minipage}
\vspace*{6cm}
\begin{flushleft}
\textsc{\@subject}
\end{flushleft}
\vspace*{-0.25cm}
\begin{flushleft}
\LARGE{\scshape{\@title}}
\end{flushleft}
\vspace*{-0.25cm}
\begin{flushleft}
\Large\textsc{\@subtitle}
\end{flushleft}
\vfill
\begin{flushleft}
\large\@author
\end{flushleft}
\vspace*{0.5cm}
\begin{flushleft}
\textnormal{Student-ID: 20-914-180}\\
\textnormal{E-Mail: }\href{mailto:datschan@student.ethz.ch}{\small\texttt{datschan@student.ethz.ch}}
\end{flushleft}
\vspace*{0.5cm}
\begin{flushleft}
\normalsize\textbf{Supervised By:}\\
\vspace*{0.25cm}
Prof. Dr. Markus Ammann\textsuperscript{2}\\
Nicole Carina Leemann\textsuperscript{2}\\
\vspace*{0.25cm}
\normalsize\normalfont{\textsuperscript{2}Laboratory of Atmospheric Chemistry,\linebreak{Paul Scherrer Institut PSI}}
\end{flushleft}
\vspace*{0.5cm}
\begin{flushleft}
\Large\@date
\end{flushleft}
\pagebreak
}\makeatother
%% ------------------------------------------------------------------%
%% FORMATTING
% Line Spacing
\renewcommand{\baselinestretch}{1.0}
% Numbering
\makeatletter
\newcommand{\@alphalph}{}
\let\@alphalph=\alphalph
\makeatother
\allowdisplaybreaks
% Tabularray Setup
\UseTblrLibrary{booktabs}
\DefTblrTemplate{caption-tag}{default}{\small\bfseries\scshape{Table \thetable}}
\DefTblrTemplate{caption-text}{default}{\small\InsertTblrText{caption}}
\DefTblrTemplate{caption-sep}{default}{\small\bfseries{:}\enskip}
\SetTblrStyle{foot}{font={\normalfont\small}}
\renewcommand\TblrOverlap[1]{#1}
%\setlength{\DTbaselineskip}{}
\SetTblrStyle{conthead-text}{font={\normalfont\small}}
% Section Title Formatting
\setkomafont{chapter}{\normalfont\Large\bfseries}
\setkomafont{chapterentry}{\normalfont\bfseries}
\setkomafont{subsection}{\normalfont\normalsize\bfseries}
\setkomafont{subsubsection}{\normalfont\normalsize\bfseries}
\setkomafont{captionlabel}{\normalfont\small\bfseries\scshape}
\setkomafont{caption}{\normalfont\small}
\renewcaptionname{english}{\figurename}{Figure }
\renewcaptionname{english}{\tablename}{Table }
\patchcmd{\chapter}{\thispagestyle{plain}}{\thispagestyle{proposal}}{}{}
% Formatting for TOC
\addtokomafont{disposition}{\rmfamily}
% Roman Numbers
\newcommand{\toRoman}[1]{\MakeUppercase{\romannumeral #1}}
% SI unit and SI settings (siunitx)
\DeclareSIUnit\amu{u}
\DeclareSIUnit\bar{bar}
\DeclareSIUnit\year{yr}
\DeclareSIUnit\month{m}
\DeclareSIUnit\week{w}
\DeclareSIUnit\day{d}
\DeclareSIUnit\ppm{ppm}
\DeclareSIUnit\ppb{ppb}
\DeclareSIUnit\ppt{ppt}
\DeclareSIUnit\pptv{pptv}
\DeclareSIUnit\atm{atm}
\DeclareSIUnit\Molar{M}
\DeclareSIUnit\gramCarbon{g\ce{C}}
\DeclareSIUnit\permille{\text{\textperthousand}}
\sisetup{separate-uncertainty, multi-part-units=single, range-units=single, range-phrase=\ensuremath{\ldots}}
% Bibliogrpahy Format
\AtBeginBibliography{\small}
\AtEveryBibitem{\clearfield{note}}
% Header and Footer Setup
\fancypagestyle{mainbody}{
\fancyhead[RO, LE]{D. Tschan}
\fancyhead[LO, RE]{\textit\leftmark}
\fancyfoot[RO, LE]{\thepage\text{ of }\pageref{LastPage}}
\fancyfoot[CO, CE]{}
\fancyfoot[LO, RE]{\textit\rightmark}
}
\fancypagestyle{proposal}{
\fancyhead[RO, LE]{D. Tschan}
\fancyhead[LO, RE]{D-USYS Master Thesis Proposal}
\fancyfoot[RO, LE]{\thepage\text{ of }\pageref{LastPage}}
\fancyfoot[CO, CE]{}
\fancyfoot[LO, RE]{\textit\leftmark}
}
% Dirtree Setup
\newcommand\mydirtree[1]{{\ttfamily\small\dirtree{#1}\par}}
%% ------------------------------------------------------------------%
%% GLOSSARIES SETUP
% Create new glossary type
\newglossary*{species}{species}
% Compile the glossaries
\makeglossaries
\makeindex[options=-s ../main/index.ist, name=main, intoc, columns=3]
% Also adds the actual entry in the glossary to the index
\glssetcategoryattribute{main}{indexname}{textbf}
\glssetcategoryattribute{main}{dualindex}{true}
% Formatting command...
\GlsXtrEnableIndexFormatOverride
% Prevents character escaping
\renewcommand*{\glsxtrautoindexesc}{}
% Sets the correct sorting in the index
\renewcommand*{\glsxtrautoindexentry}[1]{\string\glsentryuseri{#1}}
\renewcommand*{\glsxtrautoindexassignsort}[2]{%
\glsletentryfield{#1}{#2}{user1}%
}
% Sets the correct sorting in the index
\renewcommand*{\glsxtrautoindexassignsort}[2]{%
\ifglshasshort{#2}%
{\glsletentryfield{#1}{#2}{sort}}%
{\glsletentryfield{#1}{#2}{sort}}%
}
\indexsetup{firstpagestyle=mainbody}
%% SYMBOLS
% Add glossary key 'unit' and 'formula'
\glsaddkey{unit}{}{\glsentryunit}{\Glsentryunit}{\glsunit}{\Glsunit}{\GLSunit}
\glsxtrprovidestoragekey{formula}{}{\Formula}
\GlsXtrLoadResources[
src={../config/symbols}, % data in symbols.bib
sort-field={desc}, % sort by name field
sort={letter-nocase}, % case-insensitive letter sort
type=symbols, % put these terms in the symbols list
field-aliases={unit=symbol}, % convert unit key to symbol
save-locations=false % don't save location lists
]
%% CHEMICAL SPECIES
% \glsaddkey{formula}{}{\glsentryformula}{\Glsentryformula}{\glsformula}{\Glsformula}{\GLSformula}
\GlsXtrLoadResources[
src={../config/species}, % data in symbols.bib
sort-field={desc}, % sort by name field
sort={letter-nocase}, % case-insensitive letter sort
type=species, % put these terms in the symbols list
field-aliases={formula=symbol}, % convert unit key to symbol
save-locations=false % don't save location lists
]
% Enable hyperlinks for glossary
\glsenablehyper
%% ------------------------------------------------------------------%
%% THEOREMS AND ENVIRONMENTS
% General modifications
\renewcommand{\qedsymbol}{\ensuremath{\blacksquare}}
% Color definitions
\definecolor{color_box}{HTML}{EEEEEE}
\definecolor{color_box_lower}{HTML}{DDDDDD}
\definecolor{definition_color_title}{HTML}{C63B3B}
\definecolor{example_color_title}{HTML}{005B2F}
\definecolor{theorem_color_title}{HTML}{AD4CBB}
\definecolor{law_color_title}{HTML}{4C84BB}
% Definitions
\newcounter{def_custom}
\newtcolorbox[use counter=def_custom,
number within=section]
{definition_custom}[2]{
skin=bicolor,
breakable=true,
arc=0mm,
boxrule=0pt,
colback=color_box,
colframe=definition_color_title,
label={#2},
title={\textcolor{white}{Definition~\thetcbcounter:\enskip\bfseries\itshape{#1}}},
segmentation style={draw=none},
colbacklower=color_box_lower
}
% Examples
\newcounter{example_custom}
\newtcolorbox[use counter=example_custom,
number within=section]
{example_custom}[2]{
skin=bicolor,
breakable=true,
arc=0mm,
boxrule=0pt,
colback=color_box,
colframe=example_color_title,
label={#2},
title={\textcolor{white}{Example~\thetcbcounter:\enskip\bfseries\itshape{#1}}},
segmentation style={draw=none},
colbacklower=color_box_lower
}
% theorems
\newcounter{theorem_custom}
\newtcolorbox[use counter=theorem_custom,
number within=section]
{theorem_custom}[2]{
skin=bicolor,
breakable=true,
arc=0mm,
boxrule=0pt,
colback=color_box,
colframe=theorem_color_title,
label={#2},
title={\textcolor{white}{Theorem~\thetcbcounter:\enskip\bfseries\itshape{#1}}},
segmentation style={draw=none},
colbacklower=color_box_lower
}
% Law
\newcounter{law_custom}
\newtcolorbox[use counter=law_custom,
number within=section]
{law_custom}[2]{
skin=bicolor,
breakable=true,
arc=0mm,
boxrule=0pt,
colback=color_box,
colframe=law_color_title,
label={#2},
title={\textcolor{white}{Law~\thetcbcounter:\enskip\bfseries\itshape{#1}}},
segmentation style={draw=none},
colbacklower=color_box_lower
}
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