acquisition examples and cleanup
This commit is contained in:
@@ -0,0 +1,890 @@
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{
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"cells": [
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{
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"cell_type": "code",
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"execution_count": 1,
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"id": "e03fa003-fac5-44f7-b42f-2b718f6b966a",
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"metadata": {},
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"outputs": [
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"\u001b]0;⊚slic\u0007"
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]
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}
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],
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"source": [
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"from slic.core.adjustable import Adjustable, PVAdjustable, DummyAdjustable\n",
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"from slic.core.scanner import Scanner\n",
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"\n",
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"from slic.core.acquisition import BSAcquisition, PVAcquisition, SFAcquisition\n"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 1,
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"id": "cbd7faac-ff24-4e99-bb00-3536d868663f",
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"metadata": {},
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"outputs": [
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{
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"2023-10-03 at 11:58:38 | INFO | Loading started.\n",
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"**** The executable \"caRepeater\" couldn't be located\n",
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"**** because of errno = \"No such file or directory\".\n",
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"**** You may need to modify your PATH environment variable.\n",
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"**** Unable to start \"CA Repeater\" process.\n"
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]
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},
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"\u001b]0;⊚slic\u0007"
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]
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},
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{
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"2023-10-03 at 11:58:41 | WARNING | Cannot connect to stand server on saresc-vcons-02.psi.ch. Caught HTTPConnectionPool(host='saresc-vcons-02.psi.ch', port=9090): Max retries exceeded with url: / (Caused by NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7fa618d15640>: Failed to establish a new connection: [Errno 111] Connection refused')).\n",
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"2023-10-03 at 11:58:41 | WARNING | No transmission value reported from {attenuator.ID}\n",
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"2023-10-03 at 11:58:42 | INFO | Using undulator (Aramis) offset to PSSS energy of 0 eV.\n",
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"2023-10-03 at 11:58:42 | INFO | Running at cristallina with pgroup p19150.\n",
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"2023-10-03 at 11:58:42 | INFO | Loading finished.\n",
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"CA client library is unable to contact CA repeater after 50 tries.\n",
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"Silence this message by starting a CA repeater daemon\n",
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"or by calling ca_pend_event() and or ca_poll() more often.\n"
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]
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}
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],
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"source": [
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"# %run /sf/cristallina/applications/slic/cristallina/cristallina.py"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 4,
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"id": "1dae028f-116d-42ea-aead-298be9f01de3",
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"metadata": {},
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"outputs": [
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"dummy at: 0\n"
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]
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}
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],
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"source": [
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"# setup dummy axis\n",
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"dummy = DummyAdjustable()\n",
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"print(f\"dummy at: {dummy.get_current_value()}\")\n",
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"\n",
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"# setup scanner\n",
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"scanner = Scanner(data_base_dir=\"/tmp/scan_data\", scan_info_dir=\"/tmp/scan_info\")"
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]
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},
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{
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"cell_type": "markdown",
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"id": "207bcb99-d34f-47c5-a417-4de42dfc253e",
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"metadata": {},
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"source": [
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"# BS acquisition"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 2,
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"id": "7396532a-dd7b-4acf-8aa9-c12662405d00",
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"metadata": {},
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"outputs": [],
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"source": [
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"bs_example_channels = ['SARFE10-PBPG050:PHOTON-ENERGY-PER-PULSE-AVG', \"SARFE10-PBIG050-EVR0:CALCI\", \"SARES30-CAMS156-XE:x_fit_amplitude\",] # \"SARES30-CAMS156-XE:FPICTURE\"]"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 5,
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"id": "099cd6df-26d6-43e7-bf80-87eabc0a42b5",
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"metadata": {},
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"outputs": [
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{
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n",
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"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n"
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]
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},
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"Directory \"/tmp/scan_info\" does not exist, creating it...\n",
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"Directory \"/tmp/scan_data/scan0000_test_bs\" does not exist, creating it...\n",
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"\u001b[32mScan step 1 of 11\n",
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"\u001b[39mDummyAdjustable \"Dummy\" at 0.0\n",
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"Moved adjustables, starting acquisition\n",
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"No channels specified, using default channel list.\n",
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"Data Header: {'htype': 'bsr_d-1.1', 'channels': [{'name': 'SARFE10-PBPG050:PHOTON-ENERGY-PER-PULSE-AVG', 'encoding': '>'}, {'name': 'SARFE10-PBIG050-EVR0:CALCI', 'encoding': '>'}]}\n",
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"DAQTask: done\n",
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"\n",
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"Output files:\n",
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"-------------\n",
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"- /tmp/scan_data/scan0000_test_bs/scan0000_test_bs_step0000.h5\n",
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"Acquisition done\n",
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"\u001b[32mScan step 2 of 11\n",
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"\u001b[39mDummyAdjustable \"Dummy\" at 1.0\n",
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"Moved adjustables, starting acquisition\n",
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"No channels specified, using default channel list.\n"
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]
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},
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{
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n",
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"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n"
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]
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},
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"Data Header: {'htype': 'bsr_d-1.1', 'channels': [{'name': 'SARFE10-PBPG050:PHOTON-ENERGY-PER-PULSE-AVG', 'encoding': '>'}, {'name': 'SARFE10-PBIG050-EVR0:CALCI', 'encoding': '>'}]}\n",
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"DAQTask: done\n",
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"\n",
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"Output files:\n",
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"-------------\n",
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"- /tmp/scan_data/scan0000_test_bs/scan0000_test_bs_step0001.h5\n",
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"Acquisition done\n",
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"\u001b[32mScan step 3 of 11\n",
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"\u001b[39mDummyAdjustable \"Dummy\" at 2.0\n",
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"Moved adjustables, starting acquisition\n",
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"No channels specified, using default channel list.\n"
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]
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},
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{
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n",
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"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n"
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]
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},
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"Data Header: {'htype': 'bsr_d-1.1', 'channels': [{'name': 'SARFE10-PBPG050:PHOTON-ENERGY-PER-PULSE-AVG', 'encoding': '>'}, {'name': 'SARFE10-PBIG050-EVR0:CALCI', 'encoding': '>'}]}\n",
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"DAQTask: done\n",
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"\n",
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"Output files:\n",
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"-------------\n",
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"- /tmp/scan_data/scan0000_test_bs/scan0000_test_bs_step0002.h5\n",
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"Acquisition done\n",
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"\u001b[32mScan step 4 of 11\n",
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"\u001b[39mDummyAdjustable \"Dummy\" at 3.0\n",
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"Moved adjustables, starting acquisition\n",
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"No channels specified, using default channel list.\n"
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]
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},
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{
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n",
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"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n"
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]
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},
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"Data Header: {'htype': 'bsr_d-1.1', 'channels': [{'name': 'SARFE10-PBPG050:PHOTON-ENERGY-PER-PULSE-AVG', 'encoding': '>'}, {'name': 'SARFE10-PBIG050-EVR0:CALCI', 'encoding': '>'}]}\n",
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"DAQTask: done\n",
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"\n",
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"Output files:\n",
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"-------------\n",
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"- /tmp/scan_data/scan0000_test_bs/scan0000_test_bs_step0003.h5\n",
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"Acquisition done\n",
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"\u001b[32mScan step 5 of 11\n",
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"\u001b[39mDummyAdjustable \"Dummy\" at 4.0\n",
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"Moved adjustables, starting acquisition\n",
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"No channels specified, using default channel list.\n"
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]
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},
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{
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n",
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"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n"
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]
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},
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"Data Header: {'htype': 'bsr_d-1.1', 'channels': [{'name': 'SARFE10-PBPG050:PHOTON-ENERGY-PER-PULSE-AVG', 'encoding': '>'}, {'name': 'SARFE10-PBIG050-EVR0:CALCI', 'encoding': '>'}]}\n",
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"DAQTask: done\n",
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"\n",
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"Output files:\n",
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"-------------\n",
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"- /tmp/scan_data/scan0000_test_bs/scan0000_test_bs_step0004.h5\n",
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"Acquisition done\n",
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"\u001b[32mScan step 6 of 11\n",
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"\u001b[39mDummyAdjustable \"Dummy\" at 5.0\n",
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"Moved adjustables, starting acquisition\n",
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"No channels specified, using default channel list.\n"
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]
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},
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{
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n",
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"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n"
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]
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},
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"Data Header: {'htype': 'bsr_d-1.1', 'channels': [{'name': 'SARFE10-PBPG050:PHOTON-ENERGY-PER-PULSE-AVG', 'encoding': '>'}, {'name': 'SARFE10-PBIG050-EVR0:CALCI', 'encoding': '>'}]}\n",
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"DAQTask: done\n",
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"\n",
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"Output files:\n",
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"-------------\n",
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"- /tmp/scan_data/scan0000_test_bs/scan0000_test_bs_step0005.h5\n",
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"Acquisition done\n",
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"\u001b[32mScan step 7 of 11\n",
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"\u001b[39mDummyAdjustable \"Dummy\" at 6.0\n",
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"Moved adjustables, starting acquisition\n",
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"No channels specified, using default channel list.\n"
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]
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},
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{
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n",
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"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n"
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]
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},
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"Data Header: {'htype': 'bsr_d-1.1', 'channels': [{'name': 'SARFE10-PBPG050:PHOTON-ENERGY-PER-PULSE-AVG', 'encoding': '>'}, {'name': 'SARFE10-PBIG050-EVR0:CALCI', 'encoding': '>'}]}\n",
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"DAQTask: done\n",
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"\n",
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"Output files:\n",
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"-------------\n",
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"- /tmp/scan_data/scan0000_test_bs/scan0000_test_bs_step0006.h5\n",
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"Acquisition done\n",
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"\u001b[32mScan step 8 of 11\n",
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"\u001b[39mDummyAdjustable \"Dummy\" at 7.0\n",
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"Moved adjustables, starting acquisition\n",
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"No channels specified, using default channel list.\n"
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]
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},
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{
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n",
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"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n"
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]
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},
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"Data Header: {'htype': 'bsr_d-1.1', 'channels': [{'name': 'SARFE10-PBPG050:PHOTON-ENERGY-PER-PULSE-AVG', 'encoding': '>'}, {'name': 'SARFE10-PBIG050-EVR0:CALCI', 'encoding': '>'}]}\n",
|
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"DAQTask: done\n",
|
||||
"\n",
|
||||
"Output files:\n",
|
||||
"-------------\n",
|
||||
"- /tmp/scan_data/scan0000_test_bs/scan0000_test_bs_step0007.h5\n",
|
||||
"Acquisition done\n",
|
||||
"\u001b[32mScan step 9 of 11\n",
|
||||
"\u001b[39mDummyAdjustable \"Dummy\" at 8.0\n",
|
||||
"Moved adjustables, starting acquisition\n",
|
||||
"No channels specified, using default channel list.\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stderr",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n",
|
||||
"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n",
|
||||
"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"Data Header: {'htype': 'bsr_d-1.1', 'channels': [{'name': 'SARFE10-PBPG050:PHOTON-ENERGY-PER-PULSE-AVG', 'encoding': '>'}, {'name': 'SARFE10-PBIG050-EVR0:CALCI', 'encoding': '>'}]}\n",
|
||||
"DAQTask: done\n",
|
||||
"\n",
|
||||
"Output files:\n",
|
||||
"-------------\n",
|
||||
"- /tmp/scan_data/scan0000_test_bs/scan0000_test_bs_step0008.h5\n",
|
||||
"Acquisition done\n",
|
||||
"\u001b[32mScan step 10 of 11\n",
|
||||
"\u001b[39mDummyAdjustable \"Dummy\" at 9.0\n",
|
||||
"Moved adjustables, starting acquisition\n",
|
||||
"No channels specified, using default channel list.\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stderr",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"Data Header: {'htype': 'bsr_d-1.1', 'channels': [{'name': 'SARFE10-PBPG050:PHOTON-ENERGY-PER-PULSE-AVG', 'encoding': '>'}, {'name': 'SARFE10-PBIG050-EVR0:CALCI', 'encoding': '>'}]}\n",
|
||||
"DAQTask: done\n",
|
||||
"\n",
|
||||
"Output files:\n",
|
||||
"-------------\n",
|
||||
"- /tmp/scan_data/scan0000_test_bs/scan0000_test_bs_step0009.h5\n",
|
||||
"Acquisition done\n",
|
||||
"\u001b[32mScan step 11 of 11\n",
|
||||
"\u001b[39mDummyAdjustable \"Dummy\" at 10.0\n",
|
||||
"Moved adjustables, starting acquisition\n",
|
||||
"No channels specified, using default channel list.\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stderr",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n",
|
||||
"[WARNING] bsread.data.helpers - 'type' channel field not found. Parse as 64-bit floating-point number float64 (default).\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"Data Header: {'htype': 'bsr_d-1.1', 'channels': [{'name': 'SARFE10-PBPG050:PHOTON-ENERGY-PER-PULSE-AVG', 'encoding': '>'}, {'name': 'SARFE10-PBIG050-EVR0:CALCI', 'encoding': '>'}]}\n",
|
||||
"DAQTask: done\n",
|
||||
"\n",
|
||||
"Output files:\n",
|
||||
"-------------\n",
|
||||
"- /tmp/scan_data/scan0000_test_bs/scan0000_test_bs_step0010.h5\n",
|
||||
"Acquisition done\n",
|
||||
"\u001b[32mAll scan steps done\n",
|
||||
"\u001b[39m"
|
||||
]
|
||||
},
|
||||
{
|
||||
"data": {
|
||||
"text/plain": [
|
||||
"perform the following scan:\n",
|
||||
"===========================\n",
|
||||
"\n",
|
||||
"A: DummyAdjustable \"Dummy\" at 10.0\n",
|
||||
"\n",
|
||||
" # A\n",
|
||||
"-- ----\n",
|
||||
" 0 0.0\n",
|
||||
" 1 1.0\n",
|
||||
" 2 2.0\n",
|
||||
" 3 3.0\n",
|
||||
" 4 4.0\n",
|
||||
" 5 5.0\n",
|
||||
" 6 6.0\n",
|
||||
" 7 7.0\n",
|
||||
" 8 8.0\n",
|
||||
" 9 9.0\n",
|
||||
"10 10.0\n",
|
||||
"\n",
|
||||
"record 10 pulses per step to \"scan0000_test_bs\" via:\n",
|
||||
"----------------------------------------------------\n",
|
||||
"- BSAcquisition: example_instrument/example_pgroup"
|
||||
]
|
||||
},
|
||||
"execution_count": 5,
|
||||
"metadata": {},
|
||||
"output_type": "execute_result"
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"# setup acquisition \n",
|
||||
"acq = BSAcquisition('example_instrument', 'example_pgroup', default_channels=bs_example_channels, default_data_base_dir='/tmp')\n",
|
||||
"\n",
|
||||
"scanner.scan1D(dummy, 0, 10, step_size=1, n_pulses=10, filename='test_bs', acquisitions=[acq], step_info=None, return_to_initial_values=False)"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 26,
|
||||
"id": "8df87c3c-5870-4dc5-9990-3d57187b8f40",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"data": {
|
||||
"text/plain": [
|
||||
"False"
|
||||
]
|
||||
},
|
||||
"execution_count": 26,
|
||||
"metadata": {},
|
||||
"output_type": "execute_result"
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"from slic.core.scanner.scanbackend import is_only_sfdaq, is_sfdaq\n",
|
||||
"is_sfdaq([acq])"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"id": "34bc4109-0de2-4a4f-9bb3-0f8ea03973d9",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": []
|
||||
},
|
||||
{
|
||||
"cell_type": "markdown",
|
||||
"id": "13bc2a3c-e3c1-4b14-8cec-d0d4f334987a",
|
||||
"metadata": {},
|
||||
"source": [
|
||||
"is_sfdaq([acq])"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 28,
|
||||
"id": "5a455e3a-ae7a-4d3c-9e14-b42c24de8f36",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"data": {
|
||||
"text/plain": [
|
||||
"False"
|
||||
]
|
||||
},
|
||||
"execution_count": 28,
|
||||
"metadata": {},
|
||||
"output_type": "execute_result"
|
||||
},
|
||||
{
|
||||
"name": "stderr",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"CA.Client.Exception...............................................\n",
|
||||
" Warning: \"Virtual circuit unresponsive\"\n",
|
||||
" Context: \"SARES30-CPPM-MOBI2.psi.ch:5064\"\n",
|
||||
" Source File: ../tcpiiu.cpp line 926\n",
|
||||
" Current Time: Tue Oct 03 2023 17:51:00.456204338\n",
|
||||
"..................................................................\n",
|
||||
"CA.Client.Exception...............................................\n",
|
||||
" Warning: \"Virtual circuit unresponsive\"\n",
|
||||
" Context: \"SARES30-CPPM-MOBI1.psi.ch:5064\"\n",
|
||||
" Source File: ../tcpiiu.cpp line 926\n",
|
||||
" Current Time: Tue Oct 03 2023 17:54:13.473023696\n",
|
||||
"..................................................................\n",
|
||||
"Unexpected problem with CA circuit to server \"SARES30-CPPM-MOBI1.psi.ch:5064\" was \"Connection reset by peer\" - disconnecting\n",
|
||||
"CA.Client.Exception...............................................\n",
|
||||
" Warning: \"Virtual circuit disconnect\"\n",
|
||||
" Context: \"SARES30-CPPM-MOBI1.psi.ch:5064\"\n",
|
||||
" Source File: ../cac.cpp line 1237\n",
|
||||
" Current Time: Tue Oct 03 2023 17:54:42.135508142\n",
|
||||
"..................................................................\n",
|
||||
"Unexpected problem with CA circuit to server \"SARES30-CPPM-MOBI2.psi.ch:5064\" was \"No route to host\" - disconnecting\n",
|
||||
"CA.Client.Exception...............................................\n",
|
||||
" Warning: \"Virtual circuit disconnect\"\n",
|
||||
" Context: \"SARES30-CPPM-MOBI2.psi.ch:5064\"\n",
|
||||
" Source File: ../cac.cpp line 1237\n",
|
||||
" Current Time: Tue Oct 03 2023 18:06:26.581725132\n",
|
||||
"..................................................................\n"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"is_sfdaq([acq])"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 21,
|
||||
"id": "e2c866cd-4051-4a1c-b4c8-a4372e14a180",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"Directory \"/tmp/scan_data/scan0008_test_pv\" does not exist, creating it...\n",
|
||||
"\u001b[32mScan step 1 of 11\n",
|
||||
"\u001b[39mDummyAdjustable \"Dummy\" at 0.0\n",
|
||||
"Moved adjustables, starting acquisition\n",
|
||||
"No channels specified, using default channel list.\n",
|
||||
"Stopping because of: TaskError: Exception in Task\n",
|
||||
"caused by ConnectionError: connection to the following PVs timed out (1 sec): SARES30-MOBI1:MOT_1.RBV, SARES30-MOBI1:MOT_2.RBV, SARES30-MOBI1:MOT_3.RBV, SARES30-MOBI1:MOT_5.RBV, SARFE10-PBPS053:MOTOR_X2, SAROP31-OPPI151:MOTOR_X.RBV, SAROP31-OPPI151:MOTOR_Y.RBV\n",
|
||||
"Stopping caused: TaskError: Exception in Task\n",
|
||||
"caused by ConnectionError: connection to the following PVs timed out (1 sec): SARES30-MOBI1:MOT_1.RBV, SARES30-MOBI1:MOT_2.RBV, SARES30-MOBI1:MOT_3.RBV, SARES30-MOBI1:MOT_5.RBV, SARFE10-PBPS053:MOTOR_X2, SAROP31-OPPI151:MOTOR_X.RBV, SAROP31-OPPI151:MOTOR_Y.RBV\n",
|
||||
"Stopped current DAQ tasks:\n",
|
||||
"\n",
|
||||
"DAQTask: done\n",
|
||||
"\n",
|
||||
"Output files:\n",
|
||||
"-------------\n",
|
||||
"- /tmp/scan_data/scan0008_test_pv/scan0008_test_pv_step0000.h5\n",
|
||||
"\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"data": {
|
||||
"text/plain": [
|
||||
"perform the following scan:\n",
|
||||
"===========================\n",
|
||||
"\n",
|
||||
"A: DummyAdjustable \"Dummy\" at 0.0\n",
|
||||
"\n",
|
||||
" # A\n",
|
||||
"-- ----\n",
|
||||
" 0 0.0\n",
|
||||
" 1 1.0\n",
|
||||
" 2 2.0\n",
|
||||
" 3 3.0\n",
|
||||
" 4 4.0\n",
|
||||
" 5 5.0\n",
|
||||
" 6 6.0\n",
|
||||
" 7 7.0\n",
|
||||
" 8 8.0\n",
|
||||
" 9 9.0\n",
|
||||
"10 10.0\n",
|
||||
"\n",
|
||||
"record 10 pulses per step to \"scan0008_test_pv\" via:\n",
|
||||
"----------------------------------------------------\n",
|
||||
"- PVAcquisition: cristallina/p19150"
|
||||
]
|
||||
},
|
||||
"execution_count": 21,
|
||||
"metadata": {},
|
||||
"output_type": "execute_result"
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"scanner.scan1D(dummy, 0, 10, step_size=1, n_pulses=10, filename='test_pv', acquisitions=[acq], step_info=None, return_to_initial_values=False)\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"id": "e35014f0-3e5d-49fb-bf7b-e8ffad4c92f2",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": []
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 8,
|
||||
"id": "d5816898-f66e-4504-90cb-8d0e54ba3c23",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"ename": "NameError",
|
||||
"evalue": "name 'pvs' is not defined",
|
||||
"output_type": "error",
|
||||
"traceback": [
|
||||
"\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
|
||||
"\u001b[0;31mNameError\u001b[0m Traceback (most recent call last)",
|
||||
"Cell \u001b[0;32mIn[8], line 1\u001b[0m\n\u001b[0;32m----> 1\u001b[0m acq \u001b[38;5;241m=\u001b[39m PVAcquisition(\u001b[38;5;124m'\u001b[39m\u001b[38;5;124mexample_instrument\u001b[39m\u001b[38;5;124m'\u001b[39m, \u001b[38;5;124m'\u001b[39m\u001b[38;5;124mexample_pgroup\u001b[39m\u001b[38;5;124m'\u001b[39m, default_channels\u001b[38;5;241m=\u001b[39m\u001b[43mpvs\u001b[49m, default_data_base_dir\u001b[38;5;241m=\u001b[39m\u001b[38;5;124m'\u001b[39m\u001b[38;5;124m/tmp\u001b[39m\u001b[38;5;124m'\u001b[39m)\n",
|
||||
"\u001b[0;31mNameError\u001b[0m: name 'pvs' is not defined"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"acq = PVAcquisition('example_instrument', 'example_pgroup', default_channels=pvs, default_data_base_dir='/tmp')"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "markdown",
|
||||
"id": "e16c139f-3422-41fc-8557-5cbe39115535",
|
||||
"metadata": {},
|
||||
"source": [
|
||||
"# SFAcquisition example\n",
|
||||
"\n",
|
||||
"This requires an existing `pgroup`. The `default_data_base_dir` cannot be used to specify arbitrary directories as a target, instead the data is located in `/sf/<instrument>/data/<pgroup>/raw/run<XXXX>/data/acq<YYYY>.*.h5`."
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"id": "3e374115-4807-47cf-8a3e-034462011493",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": []
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 9,
|
||||
"id": "3d465878-2118-4dea-a24a-219ff4252d88",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"# TODO: requires the stand client, need small howto how to start and configure or let it run all the time\n",
|
||||
"from slic.core.acquisition.spreadsheet import Spreadsheet\n",
|
||||
"\n",
|
||||
"import os\n",
|
||||
"os.chdir(\"/sf/cristallina/applications/slic/cristallina\")\n",
|
||||
"# %run /sf/cristallina/applications/slic/cristallina/cristallina.py\n",
|
||||
"from devices.diffractometer import diffractometer\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 27,
|
||||
"id": "c4f812f4-b6fa-463f-a367-121e139b972b",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"spreadsheet = Spreadsheet({\"TD\": diffractometer.td},\n",
|
||||
" placeholders=('comment', 'sample'),\n",
|
||||
" host='saresc-vcons-02.psi.ch',\n",
|
||||
" port=9090,)"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 23,
|
||||
"id": "2c6852f5-9aa5-4d4b-8c1c-7558720f3e2e",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"data": {
|
||||
"text/plain": [
|
||||
"Motor \"SARES30-CPCL-ECMC02:TD\" at 115.00409000000013 mm"
|
||||
]
|
||||
},
|
||||
"execution_count": 23,
|
||||
"metadata": {},
|
||||
"output_type": "execute_result"
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"diffractometer.td"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 22,
|
||||
"id": "026350d2-a6bf-4b02-abcc-f560b22bbdfb",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"data": {
|
||||
"text/plain": [
|
||||
" a b c\n",
|
||||
"0 2 3 4"
|
||||
]
|
||||
},
|
||||
"execution_count": 22,
|
||||
"metadata": {},
|
||||
"output_type": "execute_result"
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"spreadsheet.client.add_row(a=2, b=3, c=4)"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 28,
|
||||
"id": "2dddb44b-689f-4cdb-858f-103610bef3c6",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"Advanced run number to 192 for SF DAQ on http://sf-daq:10002 (status: idle, last run: 192).\n",
|
||||
" a b c run filename n_pulses comment sample scanned_adjs v_min v_max n_steps TD\n",
|
||||
"0 2.0 3.0 4.0 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN\n",
|
||||
"1 NaN NaN NaN 192.0 test_bs 10.0 Dummy 0.0 2.0 3.0 115.004265\n",
|
||||
"\u001b[32mScan step 1 of 3\n",
|
||||
"\u001b[39mDummyAdjustable \"Dummy\" at 0.0\n",
|
||||
"Moved adjustables, starting acquisition\n",
|
||||
"Continuing run number 192.\n",
|
||||
"No detectors specified, using default detector list.\n",
|
||||
"No PVs specified, using default PV list.\n",
|
||||
"No channels specified, using default channel list.\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stderr",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████| 10/10 [00:00<00:00, 49.7 Hz]\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"run number: 192\n",
|
||||
"acq number: 1\n",
|
||||
"total acq number: 687\n",
|
||||
"\n",
|
||||
"DAQTask: done\n",
|
||||
"\n",
|
||||
"Output files:\n",
|
||||
"-------------\n",
|
||||
"- /sf/cristallina/data/p19150/raw/run0192/data/acq0001.BSDATA.h5\n",
|
||||
"- /sf/cristallina/data/p19150/raw/run0192/data/acq0001.CAMERAS.h5\n",
|
||||
"Acquisition done\n",
|
||||
"\u001b[32mScan step 2 of 3\n",
|
||||
"\u001b[39mDummyAdjustable \"Dummy\" at 1.0\n",
|
||||
"Moved adjustables, starting acquisition\n",
|
||||
"Continuing run number 192.\n",
|
||||
"No detectors specified, using default detector list.\n",
|
||||
"No PVs specified, using default PV list.\n",
|
||||
"No channels specified, using default channel list.\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stderr",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████| 10/10 [00:00<00:00, 49.7 Hz]\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"run number: 192\n",
|
||||
"acq number: 2\n",
|
||||
"total acq number: 688\n",
|
||||
"\n",
|
||||
"DAQTask: done\n",
|
||||
"\n",
|
||||
"Output files:\n",
|
||||
"-------------\n",
|
||||
"- /sf/cristallina/data/p19150/raw/run0192/data/acq0002.BSDATA.h5\n",
|
||||
"- /sf/cristallina/data/p19150/raw/run0192/data/acq0002.CAMERAS.h5\n",
|
||||
"Acquisition done\n",
|
||||
"\u001b[32mScan step 3 of 3\n",
|
||||
"\u001b[39mDummyAdjustable \"Dummy\" at 2.0\n",
|
||||
"Moved adjustables, starting acquisition\n",
|
||||
"Continuing run number 192.\n",
|
||||
"No detectors specified, using default detector list.\n",
|
||||
"No PVs specified, using default PV list.\n",
|
||||
"No channels specified, using default channel list.\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stderr",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"100%|███████████████████████████████████████████████████████████████████████████████████████████████████████████████| 10/10 [00:00<00:00, 49.7 Hz]"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"run number: 192\n",
|
||||
"acq number: 3\n",
|
||||
"total acq number: 689\n",
|
||||
"\n",
|
||||
"DAQTask: done\n",
|
||||
"\n",
|
||||
"Output files:\n",
|
||||
"-------------\n",
|
||||
"- /sf/cristallina/data/p19150/raw/run0192/data/acq0003.BSDATA.h5\n",
|
||||
"- /sf/cristallina/data/p19150/raw/run0192/data/acq0003.CAMERAS.h5\n",
|
||||
"Acquisition done\n",
|
||||
"\u001b[32mAll scan steps done\n",
|
||||
"\u001b[39m"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stderr",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"data": {
|
||||
"text/plain": [
|
||||
"perform the following scan:\n",
|
||||
"===========================\n",
|
||||
"\n",
|
||||
"A: DummyAdjustable \"Dummy\" at 2.0\n",
|
||||
"\n",
|
||||
"# A\n",
|
||||
"- ---\n",
|
||||
"0 0.0\n",
|
||||
"1 1.0\n",
|
||||
"2 2.0\n",
|
||||
"\n",
|
||||
"record 10 pulses per step to \"test_bs\" via:\n",
|
||||
"-------------------------------------------\n",
|
||||
"- SF DAQ on http://sf-daq:10002 (status: idle, last run: 192)"
|
||||
]
|
||||
},
|
||||
"execution_count": 28,
|
||||
"metadata": {},
|
||||
"output_type": "execute_result"
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"# setup acquisition \n",
|
||||
"\n",
|
||||
"bs_example_channels = ['SARFE10-PBPG050:PHOTON-ENERGY-PER-PULSE-AVG', \"SARFE10-PBIG050-EVR0:CALCI\", \"SARES30-CAMS156-XE:x_fit_amplitude\", \"SARES30-CAMS156-XE:FPICTURE\"]\n",
|
||||
"\n",
|
||||
"# this requires an existing pgroup\n",
|
||||
"acq = SFAcquisition('example_instrument', 'p19150', default_channels=bs_example_channels, default_data_base_dir='/tmp', spreadsheet=spreadsheet)\n",
|
||||
"scanner.scan1D(dummy, 0, 2, step_size=1, n_pulses=10, filename='test_bs', acquisitions=[acq], step_info=None, return_to_initial_values=False)"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"id": "d5c65482-4b5e-4baa-943f-e35cf384b67c",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": []
|
||||
}
|
||||
],
|
||||
"metadata": {
|
||||
"kernelspec": {
|
||||
"display_name": "Python [conda env:conda-slic]",
|
||||
"language": "python",
|
||||
"name": "conda-env-conda-slic-py"
|
||||
},
|
||||
"language_info": {
|
||||
"codemirror_mode": {
|
||||
"name": "ipython",
|
||||
"version": 3
|
||||
},
|
||||
"file_extension": ".py",
|
||||
"mimetype": "text/x-python",
|
||||
"name": "python",
|
||||
"nbconvert_exporter": "python",
|
||||
"pygments_lexer": "ipython3",
|
||||
"version": "3.9.18"
|
||||
}
|
||||
},
|
||||
"nbformat": 4,
|
||||
"nbformat_minor": 5
|
||||
}
|
||||
File diff suppressed because one or more lines are too long
File diff suppressed because it is too large
Load Diff
File diff suppressed because it is too large
Load Diff
File diff suppressed because it is too large
Load Diff
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Load Diff
@@ -0,0 +1,71 @@
|
||||
{
|
||||
"cells": [
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 3,
|
||||
"id": "bc11382b-bbae-4541-b117-58cc4cafd737",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"name": "stderr",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"Playing WAVE '/tmp/ImperialMarch60.wav' : Signed 16 bit Little Endian, Rate 22050 Hz, Mono\n"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"import subprocess\n",
|
||||
"res = subprocess.run([\"aplay\", \"/tmp/ImperialMarch60.wav\"])\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 5,
|
||||
"id": "baf1c729-d9e3-484a-bf51-b9eaa5e6f3ff",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"name": "stderr",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"Playing WAVE '/tmp/ImperialMarch60.wav' : Signed 16 bit Little Endian, Rate 22050 Hz, Mono\n"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"proc = subprocess.Popen([\"aplay /tmp/ImperialMarch60.wav\"], shell=True,\n",
|
||||
" stdin=None, stdout=None, stderr=None, close_fds=True)"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"id": "436cfe45-c941-45fa-82af-ad1a8b819eb3",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": []
|
||||
}
|
||||
],
|
||||
"metadata": {
|
||||
"kernelspec": {
|
||||
"display_name": "Python [conda env:conda-slic]",
|
||||
"language": "python",
|
||||
"name": "conda-env-conda-slic-py"
|
||||
},
|
||||
"language_info": {
|
||||
"codemirror_mode": {
|
||||
"name": "ipython",
|
||||
"version": 3
|
||||
},
|
||||
"file_extension": ".py",
|
||||
"mimetype": "text/x-python",
|
||||
"name": "python",
|
||||
"nbconvert_exporter": "python",
|
||||
"pygments_lexer": "ipython3",
|
||||
"version": "3.9.18"
|
||||
}
|
||||
},
|
||||
"nbformat": 4,
|
||||
"nbformat_minor": 5
|
||||
}
|
||||
@@ -0,0 +1,248 @@
|
||||
{
|
||||
"cells": [
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 1,
|
||||
"id": "e0a0b5eb-b6bd-4fb7-abe9-8c61318260f7",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"\u001b]0;⊚slic\u0007"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"from slic.core.adjustable import Adjustable, PVAdjustable, DummyAdjustable\n",
|
||||
"from slic.core.scanner import Scanner\n",
|
||||
"from slic.core.acquisition import BSAcquisition, PVAcquisition, SFAcquisition\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 4,
|
||||
"id": "8f30e2a0-c4d7-4bdd-a0b5-48662d807568",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"name": "stderr",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"2023-10-29 at 21:54:56 | INFO | Loading started.\n",
|
||||
"2023-10-29 at 21:54:57 | INFO | Connected to stand server\n",
|
||||
"2023-10-29 at 21:54:58 | INFO | Using undulator (Aramis) offset to PSSS energy of -62 eV.\n",
|
||||
"2023-10-29 at 21:54:58 | INFO | Running at cristallina with pgroup p21563.\n",
|
||||
"2023-10-29 at 21:54:58 | INFO | Loading finished.\n"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"%run /sf/cristallina/applications/slic/cristallina/cristallina.py\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 9,
|
||||
"id": "85a7d2d3-794a-49e1-9dec-2c85ebad7730",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"# Run the scan only when gas monitor value larger than 10uJ (and smaller than 2000uJ):\n",
|
||||
"# required fraction defines ammount of data recorded to save the step and move on to the next one\n",
|
||||
"check_intensity_gas_monitor = PVCondition(\n",
|
||||
" \"SARFE10-PBPG050:PHOTON-ENERGY-PER-PULSE-US\",\n",
|
||||
" vmin=75,\n",
|
||||
" vmax=2000,\n",
|
||||
" wait_time=0.5,\n",
|
||||
" required_fraction=0.8,\n",
|
||||
")"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 10,
|
||||
"id": "a627e0fb-ecf2-4e14-8c8e-e470c9558059",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"data": {
|
||||
"text/plain": [
|
||||
"True"
|
||||
]
|
||||
},
|
||||
"execution_count": 10,
|
||||
"metadata": {},
|
||||
"output_type": "execute_result"
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"check_intensity_gas_monitor.check()"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 11,
|
||||
"id": "a0e05c2f-2b76-4a8f-8394-b04bb4d6b2f5",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"data": {
|
||||
"text/plain": [
|
||||
"8285.310467258269"
|
||||
]
|
||||
},
|
||||
"execution_count": 11,
|
||||
"metadata": {},
|
||||
"output_type": "execute_result"
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"undulators.get()"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 12,
|
||||
"id": "2175e207-6df8-434c-8d00-985f1149dc27",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"from slic.utils import typename, nice_linspace, nice_arange"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 14,
|
||||
"id": "18767387-ae51-4d1f-a4a1-1e0015016324",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"center = 11.779\n",
|
||||
"delta = 0.1\n",
|
||||
"\n",
|
||||
"#scan.scan1D(\n",
|
||||
"# diffractometer.theta,\n",
|
||||
"# center-delta,\n",
|
||||
"# center+delta,\n",
|
||||
"# step_size=0.025,"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 18,
|
||||
"id": "6d22b87f-2063-4cb7-bef0-55a4263d4890",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"data": {
|
||||
"text/plain": [
|
||||
"array([11.679, 11.704, 11.729, 11.754, 11.779, 11.804, 11.829, 11.854,\n",
|
||||
" 11.879, 11.904])"
|
||||
]
|
||||
},
|
||||
"execution_count": 18,
|
||||
"metadata": {},
|
||||
"output_type": "execute_result"
|
||||
},
|
||||
{
|
||||
"name": "stderr",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"CA.Client.Exception...............................................\n",
|
||||
" Warning: \"Virtual circuit disconnect\"\n",
|
||||
" Context: \"SAR-CPPM-EXPMX1.psi.ch:5064\"\n",
|
||||
" Source File: ../cac.cpp line 1237\n",
|
||||
" Current Time: Wed Nov 01 2023 15:13:05.052862079\n",
|
||||
"..................................................................\n",
|
||||
"CA.Client.Exception...............................................\n",
|
||||
" Warning: \"Virtual circuit unresponsive\"\n",
|
||||
" Context: \"SAR-CPPM-EXPMX1.psi.ch:5064\"\n",
|
||||
" Source File: ../tcpiiu.cpp line 926\n",
|
||||
" Current Time: Fri Nov 03 2023 09:09:46.672425316\n",
|
||||
"..................................................................\n",
|
||||
"Unexpected problem with CA circuit to server \"SAR-CPPM-EXPMX1.psi.ch:5064\" was \"No route to host\" - disconnecting\n",
|
||||
"CA.Client.Exception...............................................\n",
|
||||
" Warning: \"Virtual circuit disconnect\"\n",
|
||||
" Context: \"SAR-CPPM-EXPMX1.psi.ch:5064\"\n",
|
||||
" Source File: ../cac.cpp line 1237\n",
|
||||
" Current Time: Fri Nov 03 2023 09:25:12.648406223\n",
|
||||
"..................................................................\n",
|
||||
"CA.Client.Exception...............................................\n",
|
||||
" Warning: \"Virtual circuit disconnect\"\n",
|
||||
" Context: \"sf-saresc-cagw-01.psi.ch:5062\"\n",
|
||||
" Source File: ../cac.cpp line 1237\n",
|
||||
" Current Time: Sun Nov 05 2023 12:20:46.598231213\n",
|
||||
"..................................................................\n",
|
||||
"CA.Client.Exception...............................................\n",
|
||||
" Warning: \"Virtual circuit disconnect\"\n",
|
||||
" Context: \"sf-saresc-cagw-01.psi.ch:5062\"\n",
|
||||
" Source File: ../cac.cpp line 1237\n",
|
||||
" Current Time: Sun Nov 05 2023 12:22:30.890766667\n",
|
||||
"..................................................................\n",
|
||||
"CA.Client.Exception...............................................\n",
|
||||
" Warning: \"Virtual circuit unresponsive\"\n",
|
||||
" Context: \"SARES30-CPPM-MOBI1.psi.ch:5064\"\n",
|
||||
" Source File: ../tcpiiu.cpp line 926\n",
|
||||
" Current Time: Mon Nov 06 2023 11:43:52.744259068\n",
|
||||
"..................................................................\n",
|
||||
"Unexpected problem with CA circuit to server \"SARES30-CPPM-MOBI1.psi.ch:5064\" was \"Connection reset by peer\" - disconnecting\n",
|
||||
"CA.Client.Exception...............................................\n",
|
||||
" Warning: \"Virtual circuit disconnect\"\n",
|
||||
" Context: \"SARES30-CPPM-MOBI1.psi.ch:5064\"\n",
|
||||
" Source File: ../cac.cpp line 1237\n",
|
||||
" Current Time: Mon Nov 06 2023 11:44:07.434289668\n",
|
||||
"..................................................................\n"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"positions = nice_arange(center-delta, center+delta+0.025, 0.025)\n",
|
||||
"positions\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 17,
|
||||
"id": "d995a8be-f9e7-46c5-add4-7b8717f14c9b",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"positions = [11.779, 11.679, 11.704, 11.729, 11.754, 11.804, 11.829, 11.854,\n",
|
||||
" 11.879]"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"id": "ccb7f011-65d2-41e9-9c83-0d1e8ab3a9d8",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"scan.ascan_list("
|
||||
]
|
||||
}
|
||||
],
|
||||
"metadata": {
|
||||
"kernelspec": {
|
||||
"display_name": "Python [conda env:conda-slic]",
|
||||
"language": "python",
|
||||
"name": "conda-env-conda-slic-py"
|
||||
},
|
||||
"language_info": {
|
||||
"codemirror_mode": {
|
||||
"name": "ipython",
|
||||
"version": 3
|
||||
},
|
||||
"file_extension": ".py",
|
||||
"mimetype": "text/x-python",
|
||||
"name": "python",
|
||||
"nbconvert_exporter": "python",
|
||||
"pygments_lexer": "ipython3",
|
||||
"version": "3.9.18"
|
||||
}
|
||||
},
|
||||
"nbformat": 4,
|
||||
"nbformat_minor": 5
|
||||
}
|
||||
@@ -0,0 +1,10 @@
|
||||
""" Multiple DAQs with different rates"""
|
||||
|
||||
from slic.core.acquisition import SFAcquisition
|
||||
|
||||
rates = {'100Hz': 1, '50Hz': 2, '25Hz': 4, '10Hz': 10, '5Hz': 20, '1Hz': 100}
|
||||
|
||||
def generate_DAQS(instrument, pgroup,bs_channels, pvs, detectors):
|
||||
DAQS = {name:SFAcquisition(instrument, pgroup, default_channels=bs_channels, default_pvs=pvs, default_detectors=detectors, rate_multiplicator=r) for (name, r) in rates.items()}
|
||||
return DAQS
|
||||
|
||||
@@ -0,0 +1,128 @@
|
||||
{
|
||||
"cells": [
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 1,
|
||||
"id": "d1bead0c-2489-4672-ab51-5e75974dd4ab",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"ename": "NameError",
|
||||
"evalue": "name 'attenuator' is not defined",
|
||||
"output_type": "error",
|
||||
"traceback": [
|
||||
"\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
|
||||
"\u001b[0;31mNameError\u001b[0m Traceback (most recent call last)",
|
||||
"Cell \u001b[0;32mIn[1], line 1\u001b[0m\n\u001b[0;32m----> 1\u001b[0m \u001b[43mattenuator\u001b[49m\u001b[38;5;241m.\u001b[39mfoils\n",
|
||||
"\u001b[0;31mNameError\u001b[0m: name 'attenuator' is not defined"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"attenuator.foils\n",
|
||||
"\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"id": "b2a73dd0-1136-44b7-b625-e5fdcd8ec8dc",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"attenuator.foils.pv_names.get()"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"id": "b1e94427-0f7d-4dd9-b61a-3d65135445ff",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"attenuator.foils.pv_index.get()"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 2,
|
||||
"id": "66d002ac-1625-4b0d-91c5-f7daa1bd941b",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"ename": "NameError",
|
||||
"evalue": "name 'attenuator' is not defined",
|
||||
"output_type": "error",
|
||||
"traceback": [
|
||||
"\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
|
||||
"\u001b[0;31mNameError\u001b[0m Traceback (most recent call last)",
|
||||
"Cell \u001b[0;32mIn[2], line 1\u001b[0m\n\u001b[0;32m----> 1\u001b[0m \u001b[43mattenuator\u001b[49m\u001b[38;5;241m.\u001b[39mfoils\u001b[38;5;241m.\u001b[39mpv_index\u001b[38;5;241m.\u001b[39mget()\n",
|
||||
"\u001b[0;31mNameError\u001b[0m: name 'attenuator' is not defined"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"attenuator.foils.pv_index.get()"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 3,
|
||||
"id": "b0f5509a-944a-4a2e-a6d1-56785beb359a",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"ename": "NameError",
|
||||
"evalue": "name 'attenuator' is not defined",
|
||||
"output_type": "error",
|
||||
"traceback": [
|
||||
"\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
|
||||
"\u001b[0;31mNameError\u001b[0m Traceback (most recent call last)",
|
||||
"Cell \u001b[0;32mIn[3], line 1\u001b[0m\n\u001b[0;32m----> 1\u001b[0m \u001b[43mattenuator\u001b[49m\u001b[38;5;241m.\u001b[39mfoils\u001b[38;5;241m.\u001b[39mpv_index\u001b[38;5;241m.\u001b[39mget()\n\u001b[1;32m 3\u001b[0m \u001b[38;5;66;03m# 0 := None\u001b[39;00m\n\u001b[1;32m 4\u001b[0m \u001b[38;5;66;03m# 1 := 2\u001b[39;00m\n\u001b[1;32m 5\u001b[0m \u001b[38;5;66;03m# 2 := 3\u001b[39;00m\n\u001b[1;32m 6\u001b[0m \u001b[38;5;66;03m# 3 := 4\u001b[39;00m\n\u001b[1;32m 7\u001b[0m \u001b[38;5;66;03m# 4 := 5\u001b[39;00m\n",
|
||||
"\u001b[0;31mNameError\u001b[0m: name 'attenuator' is not defined"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"attenuator.foils.pv_index.get()\n",
|
||||
"\n",
|
||||
"# 0 := None\n",
|
||||
"# 1 := 2\n",
|
||||
"# 2 := 3\n",
|
||||
"# 3 := 4\n",
|
||||
"# 4 := 5\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"id": "aa5aee6a-5b3f-4693-8b52-7e142872449b",
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"attenuator.foils.pv_names"
|
||||
]
|
||||
}
|
||||
],
|
||||
"metadata": {
|
||||
"kernelspec": {
|
||||
"display_name": "Python [conda env:conda-analysis_edge] *",
|
||||
"language": "python",
|
||||
"name": "conda-env-conda-analysis_edge-py"
|
||||
},
|
||||
"language_info": {
|
||||
"codemirror_mode": {
|
||||
"name": "ipython",
|
||||
"version": 3
|
||||
},
|
||||
"file_extension": ".py",
|
||||
"mimetype": "text/x-python",
|
||||
"name": "python",
|
||||
"nbconvert_exporter": "python",
|
||||
"pygments_lexer": "ipython3",
|
||||
"version": "3.11.6"
|
||||
}
|
||||
},
|
||||
"nbformat": 4,
|
||||
"nbformat_minor": 5
|
||||
}
|
||||
@@ -19,7 +19,9 @@ N_UNDS = list(range(3, 15 + 1))
|
||||
# energy_offset = 20.37839
|
||||
|
||||
# Cristallina without calibration
|
||||
energy_offset = 0
|
||||
# offset is the difference between PSSS and undulator setpoint
|
||||
# sign convention: Undulator - PSSS
|
||||
energy_offset = -62 # eV
|
||||
|
||||
|
||||
# move the PSSS motor according to the energy
|
||||
|
||||
@@ -29,13 +29,14 @@ detectors = [
|
||||
|
||||
detectors_with_config = DetectorConfig(detectors)
|
||||
detectors_with_config["JF16T03V01"]['save_dap_results'] = True
|
||||
detectors_with_config["JF16T03V01"]['disabled_modules'] = [0, 1] # bottom module:0, middle module:1, top module:2
|
||||
detectors_with_config["JF16T03V01"]['remove_raw_files'] = True
|
||||
# detectors_with_config["JF16T03V01"]['disabled_modules'] = [0, 1] # bottom module:0, middle module:1, top module:2
|
||||
|
||||
|
||||
camera_channels = [
|
||||
# "SARES30-CAMS156-PCO1:FPICTURE", # PCO edge camera for the wavefront analysis (from Alvra)
|
||||
# "SARES30-CAMS156-SMX-OAV:FPICTURE", # SwissMX OAV camera picture
|
||||
"SARES30-CAMS156-XE:FPICTURE", # X-ray eye
|
||||
# "SARES30-CAMS156-XE:FPICTURE", # X-ray eye
|
||||
]
|
||||
|
||||
####################
|
||||
@@ -142,7 +143,7 @@ channels_PSSS059 = [
|
||||
"SARFE10-PSSS059:SPECTRUM_Y_SUM",
|
||||
"SARFE10-PSSS059:SPECTRUM_X",
|
||||
"SARFE10-PSSS059:SPECTRUM_Y",
|
||||
# "SARFE10-PSSS059:FPICTURE",
|
||||
#"SARFE10-PSSS059:FPICTURE",
|
||||
"SARFE10-PSSS059:processing_parameters",
|
||||
]
|
||||
|
||||
@@ -280,7 +281,7 @@ bs_channels = (
|
||||
camera_channels
|
||||
+ channels_gas_monitor
|
||||
# + channels_RF
|
||||
# + channels_Xeye
|
||||
+ channels_Xeye
|
||||
+ channels_PBPS053
|
||||
+ channels_PSSS059
|
||||
+ channels_PBPS113
|
||||
|
||||
+13
-2
@@ -264,10 +264,10 @@ pvs_OLAS147 = [
|
||||
###################
|
||||
# Slits OAPU149
|
||||
pvs_OAPU149 = [
|
||||
"SAROP31-OAPU149:MOTOR_X.VAL",
|
||||
"SAROP31-OAPU149:MOTOR_X.RBV",
|
||||
"SAROP31-OAPU149:MOTOR_Y.VAL",
|
||||
"SAROP31-OAPU149:MOTOR_Y.RBV",
|
||||
"SAROP31-OAPU149:MOTOR_W.RBV",
|
||||
"SAROP31-OAPU149:MOTOR_H.RBV",
|
||||
]
|
||||
|
||||
###################
|
||||
@@ -408,6 +408,16 @@ pvs_smaract_juraj = [
|
||||
"SARES30-XSMA156:Rz:MOTRBV",
|
||||
]
|
||||
|
||||
pvs_diffractometer_1 = [
|
||||
"SARES30-CPCL-ECMC02:ROT2THETA-PosAct",
|
||||
"SARES30-CPCL-ECMC02:ROTTHETA-PosAct",
|
||||
"SARES30-CPCL-ECMC02:TRXBASE-PosAct",
|
||||
"SARES30-CPCL-ECMC02:TRY-PosAct",
|
||||
"SARES30-CPCL-ECMC02:TRX-PosAct",
|
||||
"SARES30-CPCL-ECMC02:TRZ-PosAct",
|
||||
"SARES30-CPCL-ECMC02:TD-PosAct",
|
||||
]
|
||||
|
||||
pvs = (
|
||||
pvs_machine
|
||||
# + pvs_RF
|
||||
@@ -438,6 +448,7 @@ pvs = (
|
||||
+ pvs_standa
|
||||
+ pvs_newport_300
|
||||
+ pvs_smaract_xyz
|
||||
+ pvs_diffractometer_1
|
||||
# + pvs_Bernina
|
||||
)
|
||||
|
||||
|
||||
+4
-9
@@ -208,7 +208,8 @@ instrument = "cristallina"
|
||||
# pgroup = "p21261" # CrQ PMS-3 July 2023
|
||||
|
||||
# pgroup = "p21528" # Cr-MX Colletier 2023-09-05
|
||||
pgroup = "p21516" # Beamline commissioning September 26-27, 2023
|
||||
pgroup = "p21516" # Beamline commissioning September 26-27, Noveber 7 2023
|
||||
# pgroup = "p21563" # Dil-Sc / diffractometer / tilted bunch / LiErF4 (/ TmVO4)
|
||||
|
||||
# setup pgroup specific logger
|
||||
setup_logging_pgroup(pgroup)
|
||||
@@ -226,15 +227,9 @@ daq = SFAcquisition(
|
||||
# There is a new EPICS buffer, so the archiver is no longer used. This makes sure we are taking PVs from the right place.
|
||||
daq.update_config_pvs()
|
||||
|
||||
slow_daq_test = SFAcquisition(
|
||||
instrument,
|
||||
"p19150",
|
||||
default_channels=bs_channels,
|
||||
default_pvs=pvs,
|
||||
default_detectors=detectors,
|
||||
rate_multiplicator=100,
|
||||
)
|
||||
from acquisition import multiple_daqs
|
||||
|
||||
DAQS = multiple_daqs.generate_DAQS(instrument, pgroup,bs_channels, pvs, detectors)
|
||||
|
||||
# daq = FakeAcquisition(instrument, pgroup)
|
||||
# daqPV = PVAcquisition(instrument, pgroup, default_channels=channels_ks) # workaround for KS not going to DB
|
||||
|
||||
@@ -0,0 +1,38 @@
|
||||
""" Diffractometer
|
||||
|
||||
motorized axis:
|
||||
|
||||
SARES30-CPCL-ECMC02:ROT2THETA
|
||||
SARES30-CPCL-ECMC02:ROTTHETA
|
||||
SARES30-CPCL-ECMC02:TRXBASE
|
||||
SARES30-CPCL-ECMC02:TRYBASE
|
||||
|
||||
"""
|
||||
|
||||
from slic.core.adjustable import Adjustable
|
||||
|
||||
from slic.core.device import Device, SimpleDevice
|
||||
from slic.devices.general.motor import Motor
|
||||
|
||||
|
||||
class Diffractometer(Device):
|
||||
def __init__(self, ID, motor_naming="MOTOR", **kwargs):
|
||||
super().__init__(ID, **kwargs)
|
||||
|
||||
self.twotheta = Motor("SARES30-CPCL-ECMC02:ROT2THETA") # , ID=None, name=None, units=None, internal=False):
|
||||
self.theta = Motor("SARES30-CPCL-ECMC02:ROTTHETA") # , ID=None, name=None, units=None, internal=False):
|
||||
|
||||
self.trx_base = Motor("SARES30-CPCL-ECMC02:TRXBASE") # , ID=None, name=None, units=None, internal=False):
|
||||
self.try_base = Motor("SARES30-CPCL-ECMC02:TRYBASE") # , ID=None, name=None, units=None, internal=False):
|
||||
|
||||
self.tr_x = Motor("SARES30-CPCL-ECMC02:TRX")
|
||||
self.tr_y = Motor("SARES30-CPCL-ECMC02:TRY")
|
||||
|
||||
self.td = Motor("SARES30-CPCL-ECMC02:TD")
|
||||
|
||||
|
||||
|
||||
diffractometer = Diffractometer("diffractometer")
|
||||
|
||||
# Set speed:
|
||||
# diffractometer.theta._motor.VELO = 0.25
|
||||
+312
-147
@@ -1,15 +1,28 @@
|
||||
# Channels to save at Cristallina endstation
|
||||
# Channels to save at Cristallina endstation, Bill's temporary implementations
|
||||
|
||||
##########################################################################################################
|
||||
##########################################################################################################
|
||||
##########################################################################################################
|
||||
# BS channels
|
||||
# JF configurations
|
||||
|
||||
from slic.core.acquisition.detcfg import DetectorConfig
|
||||
|
||||
# TODO: JF settings regarding raw conversion, compression, etc.
|
||||
detectors = [
|
||||
"JF16T03V01",
|
||||
]
|
||||
|
||||
ROIs = {'direct_beam': [200,400,500,600]}
|
||||
detectors_with_config_ROI_only = DetectorConfig(detectors)
|
||||
detectors_with_config_ROI_only["JF16T03V01"]['save_dap_results'] = False
|
||||
detectors_with_config_ROI_only["JF16T03V01"]['disabled_modules'] = [0, 1] # bottom module:0, middle module:1, top module:2
|
||||
detectors_with_config_ROI_only["JF16T03V01"]['roi'] = ROIs
|
||||
#detectors_with_config_ROI_only["JF16T03V01"]['remove_raw_files'] = True
|
||||
|
||||
##########################################################################################################
|
||||
##########################################################################################################
|
||||
##########################################################################################################
|
||||
# BS channels, updated 05.11.2023 from official channel list and adapted
|
||||
|
||||
camera_channels = [
|
||||
# "SARES30-CAMS156-PCO1:FPICTURE", # PCO edge camera for the wavefront analysis (from Alvra)
|
||||
# "SARES30-CAMS156-SMX-OAV:FPICTURE", # SwissMX OAV camera picture
|
||||
@@ -25,6 +38,7 @@ channels_gas_monitor = [
|
||||
"SARFE10-PBIG050-EVR0:CALCI", # good for correlations with total beam intensity
|
||||
"SARFE10-PBPG050:HAMP-INTENSITY-CAL",
|
||||
]
|
||||
|
||||
# RF phases and amplitudes
|
||||
channels_RF = [
|
||||
"SINSB01-RLLE-DSP:PHASE-VS",
|
||||
@@ -96,7 +110,26 @@ channels_RF = [
|
||||
"S30CB14-RLLE-DSP:AMPLT-VS",
|
||||
]
|
||||
|
||||
channels_Xeye = ["SARES30-CAMS156-XE:intensity"]
|
||||
channels_Xeye = [
|
||||
"SARES30-CAMS156-XE:intensity",
|
||||
# "SARES30-CAMS156-XE:x_center_of_mass",
|
||||
"SARES30-CAMS156-XE:x_fit_amplitude",
|
||||
"SARES30-CAMS156-XE:x_fit_mean",
|
||||
"SARES30-CAMS156-XE:x_fit_offset",
|
||||
"SARES30-CAMS156-XE:x_fit_standard_deviation",
|
||||
# "SARES30-CAMS156-XE:x_fwhm",
|
||||
"SARES30-CAMS156-XE:x_profile",
|
||||
# "SARES30-CAMS156-XE:x_rms",
|
||||
# "SARES30-CAMS156-XE:y_center_of_mass",
|
||||
"SARES30-CAMS156-XE:y_fit_amplitude",
|
||||
"SARES30-CAMS156-XE:y_fit_mean",
|
||||
"SARES30-CAMS156-XE:y_fit_offset",
|
||||
"SARES30-CAMS156-XE:y_fit_standard_deviation",
|
||||
# "SARES30-CAMS156-XE:y_fwhm",
|
||||
"SARES30-CAMS156-XE:y_profile",
|
||||
# "SARES30-CAMS156-XE:y_rms",
|
||||
"SARES30-CAMS156-XE:FPICTURE",
|
||||
]
|
||||
|
||||
######################
|
||||
# PBPS053
|
||||
@@ -119,12 +152,8 @@ channels_PSSS059 = [
|
||||
"SARFE10-PSSS059:SPECTRUM_Y_SUM",
|
||||
"SARFE10-PSSS059:SPECTRUM_X",
|
||||
"SARFE10-PSSS059:SPECTRUM_Y",
|
||||
# "SARFE10-PSSS059:FPICTURE",
|
||||
# "SARFE10-PSSS059:FIT_ERR",
|
||||
#"SARFE10-PSSS059:FPICTURE",
|
||||
"SARFE10-PSSS059:processing_parameters",
|
||||
# "SARFE10-PSSS059:SPECTRUM_AVG_CENTER",
|
||||
# "SARFE10-PSSS059:SPECTRUM_AVG_FWHM",
|
||||
# "SARFE10-PSSS059:SPECTRUM_AVG_Y",
|
||||
]
|
||||
|
||||
###################################
|
||||
@@ -139,6 +168,7 @@ channels_Bernina = [
|
||||
"SAROP21-PPRM113:x_fit_mean",
|
||||
"SAROP21-PPRM113:y_fit_mean",
|
||||
]
|
||||
|
||||
###################################
|
||||
# Beam position monitor PBPS113
|
||||
channels_PBPS113 = [
|
||||
@@ -170,6 +200,13 @@ channels_PBPS113_waveforms = [
|
||||
"SAROP31-PBPS113:Lnk9Ch15-WF-DATA",
|
||||
]
|
||||
|
||||
###################################
|
||||
# Diode PDIM 113
|
||||
channels_PDIM113 = [
|
||||
"SAROP31-PBPS113:Lnk9Ch0-PP_VAL_PD4",
|
||||
]
|
||||
|
||||
|
||||
####################
|
||||
# Profile monitor PPRM113 (from _proc process)
|
||||
channels_PPRM113 = [
|
||||
@@ -234,12 +271,40 @@ channels_PPRM150 = [
|
||||
# "SAROP31-PPRM150:FPICTURE", # full pictures for debugging purposes at the moment, from _ib process
|
||||
]
|
||||
|
||||
|
||||
###################################
|
||||
# Diode of PSCD153
|
||||
channels_PSCD153_diode = [
|
||||
"SAROP31-PBPS149:Lnk9Ch0-PP_VAL_PD4",
|
||||
]
|
||||
|
||||
#######################
|
||||
# Cristallina event reciever
|
||||
channels_EVR = [
|
||||
"SAR-CVME-TIFALL6:EvtSet",
|
||||
]
|
||||
|
||||
channels_Xeye = [
|
||||
"SARES30-CAMS156-XE:intensity",
|
||||
# "SARES30-CAMS156-XE:x_center_of_mass",
|
||||
"SARES30-CAMS156-XE:x_fit_amplitude",
|
||||
"SARES30-CAMS156-XE:x_fit_mean",
|
||||
"SARES30-CAMS156-XE:x_fit_offset",
|
||||
"SARES30-CAMS156-XE:x_fit_standard_deviation",
|
||||
# "SARES30-CAMS156-XE:x_fwhm",
|
||||
"SARES30-CAMS156-XE:x_profile",
|
||||
# "SARES30-CAMS156-XE:x_rms",
|
||||
# "SARES30-CAMS156-XE:y_center_of_mass",
|
||||
"SARES30-CAMS156-XE:y_fit_amplitude",
|
||||
"SARES30-CAMS156-XE:y_fit_mean",
|
||||
"SARES30-CAMS156-XE:y_fit_offset",
|
||||
"SARES30-CAMS156-XE:y_fit_standard_deviation",
|
||||
# "SARES30-CAMS156-XE:y_fwhm",
|
||||
"SARES30-CAMS156-XE:y_profile",
|
||||
# "SARES30-CAMS156-XE:y_rms",
|
||||
"SARES30-CAMS156-XE:FPICTURE",
|
||||
]
|
||||
|
||||
#######################
|
||||
# Digitizer
|
||||
channels_digitizer = [
|
||||
@@ -254,6 +319,124 @@ channels_digitizer = [
|
||||
]
|
||||
|
||||
|
||||
##########################################################################################################
|
||||
# Bernina channels
|
||||
|
||||
#######################
|
||||
# Profile monitor PPRM113 (from _proc process)
|
||||
channels_PPRM113_Bernina = [
|
||||
"SAROP21-PPRM113:intensity",
|
||||
# "SAROP21-PPRM113:x_center_of_mass",
|
||||
# "SAROP21-PPRM113:x_fit_amplitude",
|
||||
# "SAROP21-PPRM113:x_fit_mean",
|
||||
# "SAROP21-PPRM113:x_fit_offset",
|
||||
# "SAROP21-PPRM113:x_fit_standard_deviation",
|
||||
# "SAROP21-PPRM113:x_fwhm",
|
||||
# "SAROP21-PPRM113:x_profile",
|
||||
# "SAROP21-PPRM113:x_rms",
|
||||
# "SAROP21-PPRM113:y_center_of_mass",
|
||||
# "SAROP21-PPRM113:y_fit_amplitude",
|
||||
# "SAROP21-PPRM113:y_fit_mean",
|
||||
# "SAROP21-PPRM113:y_fit_offset",
|
||||
# "SAROP21-PPRM113:y_fit_standard_deviation",
|
||||
# "SAROP21-PPRM113:y_fwhm",
|
||||
# "SAROP21-PPRM113:y_profile",
|
||||
# "SAROP21-PPRM113:y_rms",
|
||||
# "SAROP21-PPRM113:FPICTURE", # full pictures for debugging purposes at the moment, from _ib process
|
||||
]
|
||||
|
||||
###########################
|
||||
# Beam position monitor Bernina
|
||||
channels_PBPS103_Bernina = [
|
||||
"SAROP21-PBPS103:INTENSITY",
|
||||
"SAROP21-PBPS103:XPOS",
|
||||
"SAROP21-PBPS103:YPOS",
|
||||
]
|
||||
|
||||
##########################################################################################################
|
||||
# special bs channel configurations
|
||||
|
||||
####################
|
||||
|
||||
bs_channels_OAPU107_scan = (
|
||||
channels_gas_monitor
|
||||
+ channels_PBPS053
|
||||
+ channels_PSSS059
|
||||
+ channels_PBPS113
|
||||
+ channels_PBPS149
|
||||
+ channels_PPRM150
|
||||
)
|
||||
|
||||
bs_channels_OAPU149_scan = (
|
||||
channels_gas_monitor
|
||||
+ channels_PBPS053
|
||||
+ channels_PSSS059
|
||||
+ channels_PBPS113
|
||||
+ channels_PBPS149
|
||||
+ channels_PPRM150
|
||||
)
|
||||
|
||||
bs_channels_pbps_snapshot = (
|
||||
channels_gas_monitor
|
||||
+ channels_PBPS053
|
||||
+ channels_PSSS059
|
||||
+ channels_PBPS113
|
||||
+ channels_PBPS149
|
||||
)
|
||||
|
||||
bs_channels_PBPS_tests = (
|
||||
channels_gas_monitor
|
||||
+ channels_PBPS053
|
||||
+ channels_PSSS059
|
||||
+ channels_PBPS113
|
||||
+ channels_PBPS149
|
||||
+ channels_Xeye
|
||||
)
|
||||
|
||||
bs_channels_OATA_tests = (
|
||||
channels_gas_monitor
|
||||
+ channels_PBPS053
|
||||
# + channels_PSSS059
|
||||
# + channels_PBPS113
|
||||
# + channels_PBPS149
|
||||
+ channels_PSCD153_diode
|
||||
)
|
||||
|
||||
bs_channels_OATA_tests_JF = (
|
||||
channels_gas_monitor
|
||||
+ channels_PBPS053
|
||||
+ channels_PSSS059
|
||||
+ channels_PBPS113
|
||||
+ channels_PBPS149
|
||||
)
|
||||
|
||||
bs_channels_PPRM150 = (
|
||||
channels_gas_monitor
|
||||
+ channels_PBPS053
|
||||
+ channels_PSSS059
|
||||
+ channels_PPRM150
|
||||
)
|
||||
|
||||
bs_channels_jf_direct_beam = (
|
||||
channels_gas_monitor
|
||||
+ channels_PBPS053
|
||||
+ channels_PSSS059
|
||||
+ channels_PBPS113
|
||||
+ channels_PBPS149
|
||||
+ channels_EVR
|
||||
)
|
||||
|
||||
bs_channels_DCM_Bernina = (
|
||||
channels_gas_monitor
|
||||
+ channels_PBPS053
|
||||
+ channels_PSSS059
|
||||
+ channels_PPRM113_Bernina
|
||||
+ channels_PBPS103_Bernina
|
||||
)
|
||||
|
||||
|
||||
|
||||
|
||||
##########################################################################################################
|
||||
##########################################################################################################
|
||||
##########################################################################################################
|
||||
@@ -379,6 +562,27 @@ pvs_PBPS053 = [
|
||||
"SARFE10-PBPS053:MOTOR_PROBE",
|
||||
]
|
||||
|
||||
###################
|
||||
# Spectrometer PSSS059
|
||||
pvs_PSSS059 = [
|
||||
"SARFE10-PSSS055:MOTOR_X1.RBV",
|
||||
"SARFE10-PSSS055:MOTOR_Y1.RBV",
|
||||
"SARFE10-PSSS055:MOTOR_ROT_X1.RBV",
|
||||
"SARFE10-PSSS055:MOTOR_PROBE.RBV",
|
||||
"SARFE10-PSSS059:MOTOR_X3.RBV",
|
||||
"SARFE10-PSSS059:MOTOR_Y3.RBV",
|
||||
"SARFE10-PSSS059:MOTOR_ROT_X3.RBV",
|
||||
"SARFE10-PSSS059:MOTOR_Y4.RBV",
|
||||
"SARFE10-PSSS059:MOTOR_ROT_X4.RBV",
|
||||
"SARFE10-PSSS059:MOTOR_X5.RBV",
|
||||
"SARFE10-PSSS059:MOTOR_Y5.RBV",
|
||||
"SARFE10-PSSS059:MOTOR_Z5.RBV",
|
||||
"SARFE10-PSSS055:GRATING_SP",
|
||||
"SARFE10-PSSS059:CRYSTAL_SP",
|
||||
"SARFE10-PSSS059:SPC_ROI_YMIN",
|
||||
"SARFE10-PSSS059:SPC_ROI_YMAX",
|
||||
]
|
||||
|
||||
####################
|
||||
# Upstream attenuator OATT053
|
||||
pvs_OATT053 = [
|
||||
@@ -405,42 +609,6 @@ pvs_PPRM053 = [
|
||||
"SARFE10-PPRM053:MOTOR_PROBE.RBV",
|
||||
]
|
||||
|
||||
###################
|
||||
# Bernina mono
|
||||
pvs_Bernina = [
|
||||
"SAROP21-ARAMIS:ENERGY_SP",
|
||||
"SAROP21-ARAMIS:ENERGY",
|
||||
"SAROP21-PBPS103:MOTOR_X1.DRBV",
|
||||
"SAROP21-PBPS103:MOTOR_Y1.DRBV",
|
||||
"SAROP21-PBPS103:MOTOR_X1.RBV",
|
||||
"SAROP21-PBPS103:MOTOR_Y1.RBV",
|
||||
"SAROP21-PBPS103:MOTOR_PROBE.RBV",
|
||||
"SAROP21-PPRM113:MOTOR_PROBE.RBV"
|
||||
]
|
||||
|
||||
####################
|
||||
# Single shot spectrometer PSS059
|
||||
pvs_PSSS059 = [
|
||||
"SARFE10-PSSS055:MOTOR_X1.RBV",
|
||||
"SARFE10-PSSS055:MOTOR_Y1.RBV",
|
||||
"SARFE10-PSSS055:MOTOR_ROT_X1.RBV",
|
||||
"SARFE10-PSSS055:MOTOR_PROBE.RBV",
|
||||
"SARFE10-PSSS059:MOTOR_X3.RBV",
|
||||
"SARFE10-PSSS059:MOTOR_Y3.RBV",
|
||||
"SARFE10-PSSS059:MOTOR_ROT_X3.RBV",
|
||||
"SARFE10-PSSS059:MOTOR_Y4.RBV",
|
||||
"SARFE10-PSSS059:MOTOR_ROT_X4.RBV",
|
||||
"SARFE10-PSSS059:MOTOR_X5.RBV",
|
||||
"SARFE10-PSSS059:MOTOR_Y5.RBV",
|
||||
"SARFE10-PSSS059:MOTOR_Z5.RBV",
|
||||
"SARFE10-PSSS055:GRATING_SP",
|
||||
"SARFE10-PSSS059:CRYSTAL_SP",
|
||||
"SARFE10-PSSS059:SPC_ROI_YMIN",
|
||||
"SARFE10-PSSS059:SPC_ROI_YMAX",
|
||||
]
|
||||
|
||||
|
||||
|
||||
####################
|
||||
# First Cristallina horizontal offset mirror OOMH067
|
||||
pvs_OOMH067 = [
|
||||
@@ -506,6 +674,12 @@ pvs_PBPS113 = [
|
||||
"SAROP31-PBPS113:MOTOR_PROBE.RBV",
|
||||
]
|
||||
|
||||
####################
|
||||
# Diode PDIM113
|
||||
pvs_PDIM113 = [
|
||||
"SAROP31-PDIM113:MOTOR_PROBE.RBV"
|
||||
]
|
||||
|
||||
###################
|
||||
# Beam profile monitor PPRM113
|
||||
pvs_PPRM113 = [
|
||||
@@ -521,10 +695,10 @@ pvs_OLAS147 = [
|
||||
###################
|
||||
# Slits OAPU149
|
||||
pvs_OAPU149 = [
|
||||
"SAROP31-OAPU149:MOTOR_X.VAL",
|
||||
"SAROP31-OAPU149:MOTOR_X.RBV",
|
||||
"SAROP31-OAPU149:MOTOR_Y.VAL",
|
||||
"SAROP31-OAPU149:MOTOR_Y.RBV",
|
||||
"SAROP31-OAPU149:MOTOR_W.RBV",
|
||||
"SAROP31-OAPU149:MOTOR_H.RBV",
|
||||
]
|
||||
|
||||
###################
|
||||
@@ -566,6 +740,7 @@ pvs_OPPI151 = [
|
||||
"SAROP31-OPPI151:MOTOR_Y.RBV",
|
||||
]
|
||||
|
||||
|
||||
####################
|
||||
## Horizontal offset mirror ODMV152
|
||||
pvs_ODMV152 = [
|
||||
@@ -581,13 +756,6 @@ pvs_ODMV152 = [
|
||||
"SAROP31-ODMV152:TX.RBV",
|
||||
]
|
||||
|
||||
#######################
|
||||
# from _proc process
|
||||
pvs_PPRM150 = [
|
||||
"SAROP31-PPRM150:MOTOR_PROBE.RBV",
|
||||
]
|
||||
|
||||
|
||||
###########################
|
||||
# Vertical KB mirror OKBV153
|
||||
pvs_OKBV153 = [
|
||||
@@ -607,7 +775,6 @@ pvs_OKBV153 = [
|
||||
|
||||
####################
|
||||
# Screen between the KB's PSCD153
|
||||
# Not implemented yet
|
||||
pvs_PSCD153 = [
|
||||
"SAROP31-PSCD153:MOTOR_PROBE.RBV"
|
||||
]
|
||||
@@ -636,6 +803,13 @@ pvs_standa = [
|
||||
"SARES30-MOBI1:MOT_3.RBV",
|
||||
]
|
||||
|
||||
####################
|
||||
# Newport 300 mm stage
|
||||
pvs_newport_300 = [
|
||||
"SARES30-MOBI1:MOT_5.RBV",
|
||||
]
|
||||
|
||||
|
||||
###############################
|
||||
# Smaract stages mini XYZ from SwissMX
|
||||
pvs_smaract_xyz = [
|
||||
@@ -665,7 +839,74 @@ pvs_smaract_juraj = [
|
||||
"SARES30-XSMA156:Rz:MOTRBV",
|
||||
]
|
||||
|
||||
pvs = (
|
||||
pvs_diffractometer_1 = [
|
||||
"SARES30-CPCL-ECMC02:ROT2THETA-PosAct",
|
||||
"SARES30-CPCL-ECMC02:ROTTHETA-PosAct",
|
||||
"SARES30-CPCL-ECMC02:TRXBASE-PosAct",
|
||||
"SARES30-CPCL-ECMC02:TRY-PosAct",
|
||||
"SARES30-CPCL-ECMC02:TRX-PosAct",
|
||||
"SARES30-CPCL-ECMC02:TRZ-PosAct",
|
||||
"SARES30-CPCL-ECMC02:TD-PosAct",
|
||||
]
|
||||
|
||||
|
||||
##########################################################################################################
|
||||
# Bernina
|
||||
|
||||
###################
|
||||
# Slits OAPU092
|
||||
pvs_OAPU092 = [
|
||||
"SAROP21-OAPU092:MOTOR_X.RBV",
|
||||
"SAROP21-OAPU092:MOTOR_Y.RBV",
|
||||
"SAROP21-OAPU092:MOTOR_W.RBV",
|
||||
"SAROP21-OAPU092:MOTOR_H.RBV",
|
||||
]
|
||||
|
||||
###################
|
||||
# Bernina mono
|
||||
pvs_ODCM098 = [
|
||||
"SAROP21-ARAMIS:ENERGY_SP",
|
||||
"SAROP21-ARAMIS:ENERGY",
|
||||
"SAROP21-PBPS103:MOTOR_X1.DRBV",
|
||||
"SAROP21-PBPS103:MOTOR_Y1.DRBV",
|
||||
"SAROP21-PBPS103:MOTOR_X1.RBV",
|
||||
"SAROP21-PBPS103:MOTOR_Y1.RBV",
|
||||
"SAROP21-PBPS103:MOTOR_PROBE.RBV",
|
||||
"SAROP21-PPRM113:MOTOR_PROBE.RBV"
|
||||
]
|
||||
|
||||
###################
|
||||
# Beam position and intensity monitor PBPS149
|
||||
pvs_PBPS103 = [
|
||||
"SAROP21-PBPS103:MOTOR_X1.DRBV",
|
||||
"SAROP21-PBPS103:MOTOR_Y1.DRBV",
|
||||
"SAROP21-PBPS103:MOTOR_X1.RBV",
|
||||
"SAROP21-PBPS103:MOTOR_Y1.RBV",
|
||||
"SAROP21-PBPS103:MOTOR_PROBE.RBV",
|
||||
]
|
||||
|
||||
###################
|
||||
# Slits OAPU102
|
||||
pvs_OAPU102 = [
|
||||
"SAROP21-OAPU102:MOTOR_X.RBV",
|
||||
"SAROP21-OAPU102:MOTOR_Y.RBV",
|
||||
"SAROP21-OAPU102:MOTOR_W.RBV",
|
||||
"SAROP21-OAPU102:MOTOR_H.RBV",
|
||||
]
|
||||
|
||||
####################
|
||||
# Pulse picker OPPI113
|
||||
pvs_OPPI113 = [
|
||||
"SAROP21-OPPI113:MOTOR_X1.RBV",
|
||||
"SAROP21-OPPI113:MOTOR_Y1.RBV",
|
||||
]
|
||||
|
||||
|
||||
##########################################################################################################
|
||||
# special pvs configurations
|
||||
|
||||
####################
|
||||
pvs_cristallina = (
|
||||
pvs_machine
|
||||
# + pvs_RF
|
||||
# + pvs_undulator
|
||||
@@ -681,6 +922,7 @@ pvs = (
|
||||
+ pvs_PPRM085
|
||||
+ pvs_OAPU107
|
||||
+ pvs_PBPS113
|
||||
+ pvs_PDIM113
|
||||
+ pvs_PPRM113
|
||||
+ pvs_OLAS147
|
||||
+ pvs_OAPU149
|
||||
@@ -702,66 +944,12 @@ pvs = (
|
||||
# + pvs_smaract_juraj
|
||||
|
||||
|
||||
##########################
|
||||
#########################
|
||||
|
||||
####################
|
||||
|
||||
detectors_jf_direct_beam_012 = [
|
||||
"JF16T03V01",
|
||||
]
|
||||
|
||||
|
||||
####################
|
||||
|
||||
bs_channels_OAPU107_scan = (
|
||||
channels_gas_monitor
|
||||
+ channels_PBPS053
|
||||
+ channels_PSSS059
|
||||
+ channels_PBPS113
|
||||
+ channels_PBPS113
|
||||
+ channels_PPRM150
|
||||
)
|
||||
|
||||
bs_channels_OAPU149_scan = (
|
||||
channels_gas_monitor
|
||||
+ channels_PBPS053
|
||||
+ channels_PSSS059
|
||||
+ channels_PBPS113
|
||||
+ channels_PBPS113
|
||||
+ channels_PPRM150
|
||||
)
|
||||
|
||||
bs_channels_pbps_snapshot = (
|
||||
channels_gas_monitor
|
||||
+ channels_PBPS053
|
||||
+ channels_PSSS059
|
||||
+ channels_PBPS113
|
||||
+ channels_PBPS149
|
||||
)
|
||||
|
||||
bs_channels_PPRM150 = (
|
||||
channels_gas_monitor
|
||||
+ channels_PBPS053
|
||||
+ channels_PSSS059
|
||||
+ channels_PPRM150
|
||||
+ ["SAROP31-PPRM150:FPICTURE"]
|
||||
)
|
||||
|
||||
bs_channels_jf_direct_beam = (
|
||||
channels_gas_monitor
|
||||
+ channels_PBPS053
|
||||
+ channels_PSSS059
|
||||
+ channels_PBPS113
|
||||
+ channels_PBPS149
|
||||
+ channels_EVR
|
||||
)
|
||||
|
||||
|
||||
####################
|
||||
|
||||
pvs_channels_PPRM150 = (
|
||||
pvs_gas_monitor
|
||||
pvs_bernina = (
|
||||
pvs_machine
|
||||
# + pvs_RF
|
||||
# + pvs_undulator
|
||||
+ pvs_gas_monitor
|
||||
+ pvs_OAPU044
|
||||
+ pvs_PBPS053
|
||||
+ pvs_OATT053
|
||||
@@ -769,36 +957,13 @@ pvs_channels_PPRM150 = (
|
||||
+ pvs_PSSS059
|
||||
+ pvs_OOMH067
|
||||
+ pvs_PSCR068
|
||||
+ pvs_OOMH084
|
||||
+ pvs_PPRM085
|
||||
+ pvs_OAPU107
|
||||
+ pvs_PBPS113
|
||||
+ pvs_PPRM113
|
||||
+ pvs_OLAS147
|
||||
+ pvs_OAPU149
|
||||
+ pvs_PBPS149
|
||||
+ pvs_PPRM150
|
||||
)
|
||||
|
||||
pvs_channels_jf_direct_beam = (
|
||||
pvs_gas_monitor
|
||||
+ pvs_OAPU044
|
||||
+ pvs_PBPS053
|
||||
+ pvs_OATT053
|
||||
+ pvs_PPRM053
|
||||
+ pvs_PSSS059
|
||||
+ pvs_OOMH067
|
||||
+ pvs_OOMH084
|
||||
+ pvs_PPRM085
|
||||
+ pvs_OAPU107
|
||||
+ pvs_PBPS113
|
||||
+ pvs_PPRM113
|
||||
+ pvs_OAPU149
|
||||
+ pvs_PBPS149
|
||||
+ pvs_OATA150
|
||||
+ pvs_OPPI151
|
||||
+ pvs_ODMV152
|
||||
+ pvs_OKBV153
|
||||
+ pvs_PSCD153
|
||||
+ pvs_OKBH154
|
||||
+ pvs_OAPU092
|
||||
# + pvs_OOMV092
|
||||
# + pvs_PPRM094
|
||||
# + pvs_PSCR097
|
||||
+ pvs_ODCM098
|
||||
+ pvs_OAPU102
|
||||
+ pvs_PBPS103
|
||||
+ pvs_OPPI113
|
||||
# + pvs_PPRM113_Bernina
|
||||
)
|
||||
|
||||
@@ -0,0 +1,26 @@
|
||||
# move Newport in steps
|
||||
import time
|
||||
import numpy as np
|
||||
|
||||
from cristallina import newport
|
||||
print(newport)
|
||||
|
||||
# temporarily disable limits
|
||||
newport.z.set_epics_limits(-300, 300)
|
||||
|
||||
# directions: minus is towards 25 pin connector
|
||||
|
||||
# newport.z.mv(-140).wait()
|
||||
newport.z.reset_current_value_to(0)
|
||||
|
||||
# 305 mm travel
|
||||
|
||||
x_steps = np.arange(1, 310, 10)
|
||||
|
||||
for x in x_steps:
|
||||
print(f"at: {x}")
|
||||
newport.z.mv(x).wait()
|
||||
time.sleep(3)
|
||||
|
||||
|
||||
|
||||
Reference in New Issue
Block a user