Refactoring of JF writer

This commit is contained in:
2020-05-27 10:18:44 +02:00
parent 96314db179
commit 65d587c80b
2 changed files with 21 additions and 19 deletions
+2 -2
View File
@@ -9,7 +9,7 @@
class JFH5Writer {
const size_t n_frames_;
const size_t n_images_;
const size_t n_modules_;
size_t current_write_index_;
@@ -24,7 +24,7 @@ class JFH5Writer {
public:
JFH5Writer(const std::string& output_file,
const size_t n_frames,
const size_t n_images,
const size_t n_modules);
~JFH5Writer();
void write(const ImageMetadataBuffer* metadata, const char* data);
+19 -17
View File
@@ -14,9 +14,9 @@ using namespace core_buffer;
JFH5Writer::JFH5Writer(
const string& output_file,
const size_t n_frames,
const size_t n_images,
const size_t n_modules) :
n_frames_(n_frames),
n_images_(n_images),
n_modules_(n_modules),
current_write_index_(0)
{
@@ -26,7 +26,7 @@ JFH5Writer::JFH5Writer(
file_ = H5::H5File(output_file, H5F_ACC_TRUNC);
hsize_t image_dataset_dims[3] =
{n_frames_, n_modules * MODULE_Y_SIZE, MODULE_X_SIZE};
{n_images_, n_modules * MODULE_Y_SIZE, MODULE_X_SIZE};
H5::DataSpace image_dataspace(3, image_dataset_dims);
@@ -52,7 +52,7 @@ JFH5Writer::JFH5Writer(
image_dataspace,
image_dataset_properties);
hsize_t metadata_dataset_dims[] = {n_frames_, 1};
hsize_t metadata_dataset_dims[] = {n_images_, 1};
H5::DataSpace metadata_dataspace(2, metadata_dataset_dims);
pulse_id_dataset_ = file_.createDataSet(
@@ -75,10 +75,10 @@ JFH5Writer::JFH5Writer(
H5::PredType::NATIVE_UINT8,
metadata_dataspace);
b_pulse_id_ = new uint64_t[n_frames_];
b_frame_index_= new uint64_t[n_frames_];
b_daq_rec_ = new uint32_t[n_frames_];
b_is_good_frame_ = new uint8_t[n_frames_];
b_pulse_id_ = new uint64_t[n_images_];
b_frame_index_= new uint64_t[n_images_];
b_daq_rec_ = new uint32_t[n_images_];
b_is_good_frame_ = new uint8_t[n_images_];
}
JFH5Writer::~JFH5Writer()
@@ -116,34 +116,33 @@ void JFH5Writer::close_file()
void JFH5Writer::write(
const ImageMetadataBuffer* metadata, const char* data)
{
size_t n_images_to_copy = min(n_frames_ - current_write_index_,
size_t n_images_to_copy = min(n_images_ - current_write_index_,
BUFFER_BLOCK_SIZE);
if (n_images_to_copy < 1) {
return;
}
hsize_t b_i_dims[3] = {
n_images_to_copy,
MODULE_Y_SIZE*n_modules_,
MODULE_X_SIZE};
hsize_t b_i_dims[3] = {n_images_to_copy,
MODULE_Y_SIZE * n_modules_,
MODULE_X_SIZE};
H5::DataSpace b_i_space(3, b_i_dims);
hsize_t f_i_dims[3] = {n_frames_,
hsize_t f_i_dims[3] = {n_images_,
MODULE_Y_SIZE * n_modules_,
MODULE_X_SIZE};
H5::DataSpace f_i_space(3, f_i_dims);
hsize_t i_count[] = {n_images_to_copy,
MODULE_Y_SIZE*n_modules_,
MODULE_Y_SIZE * n_modules_,
MODULE_X_SIZE};
hsize_t i_start[] = {current_write_index_, 0, 0};
f_i_space.selectHyperslab(H5S_SELECT_SET, i_count, i_start);
image_dataset_.write(
data, H5::PredType::NATIVE_UINT16,
b_i_space, f_i_space);
data, H5::PredType::NATIVE_UINT16, b_i_space, f_i_space);
// pulse_id
{
auto b_current_ptr = b_pulse_id_ + current_write_index_;
const uint64_t* metadata_pulse_id_ptr =
@@ -153,6 +152,7 @@ void JFH5Writer::write(
sizeof(uint64_t) * n_images_to_copy);
}
// frame_index
{
auto b_current_ptr = b_frame_index_ + current_write_index_;
const uint64_t* metadata_pulse_id_ptr =
@@ -162,6 +162,7 @@ void JFH5Writer::write(
sizeof(uint64_t) * n_images_to_copy);
}
// daq_rec
{
auto b_current_ptr = b_daq_rec_ + current_write_index_;
const uint32_t* metadata_pulse_id_ptr =
@@ -171,6 +172,7 @@ void JFH5Writer::write(
sizeof(uint32_t) * n_images_to_copy);
}
// is_good_frame
{
auto b_current_ptr = b_is_good_frame_ + current_write_index_;
const uint8_t* metadata_pulse_id_ptr =