Merge PSIWriter with WriterManager

It does not make sense to have 2 separate entities for this. The writer
manager only responsibility was to control the PSIWriter.
This commit is contained in:
2019-04-26 10:50:29 +02:00
parent ce8753ab00
commit 191ea4eaf5
2 changed files with 0 additions and 270 deletions
-222
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@@ -1,222 +0,0 @@
#include "PSIWriter.hpp"
#include "config.hpp"
#include "BufferedWriter.hpp"
using namespace std;
void PSIWriter::run_writer(WriterManager& writer_manager,
string output_file,
uint64_t n_frames)
{
writing_thread = boost::thread(&PSIWriter::write_h5,
this,
boost::ref(writer_manager),
output_file,
n_frames);
}
void PSIWriter::join_writer(){
writing_thread.join();
}
void PSIWriter::write_h5(WriterManager& writer_manager,
string output_file,
uint64_t n_frames)
{
try {
size_t metadata_buffer_size =
frames_per_file != 0 ? frames_per_file : n_frames;
auto metadata_buffer = unique_ptr<MetadataBuffer>(
new MetadataBuffer(metadata_buffer_size,
header_values_type));
auto writer = get_buffered_writer(
output_file,
n_frames,
move(metadata_buffer),
frames_per_file,
config::dataset_increase_step);
writer->create_file();
auto raw_frames_dataset_name = config::raw_image_dataset_name;
uint64_t last_pulse_id = 0;
while(writer_manager.is_writing() || !ring_buffer.is_empty()) {
if (ring_buffer.is_empty()) {
boost::this_thread::sleep_for(
boost::chrono::milliseconds(
config::ring_buffer_read_retry_interval));
continue;
}
const pair< shared_ptr<FrameMetadata>, char* > received_data =
ring_buffer.read();
// NULL pointer means that the ringbuffer->read() timeouted.
if(!received_data.first) {
continue;
}
// The acquisition stops when there are no more frames to write.
if (!writer_manager.write_frame()) {
break;
}
// Write file format before rolling to next file.
if (!writer->is_data_for_current_file(
received_data.first->frame_index)) {
#ifdef DEBUG_OUTPUT
using namespace date;
using namespace chrono;
cout << "[" << system_clock::now() << "]";
cout << "[PSIWriter::write_h5] Frame index ";
cout << received_data.first->frame_index;
cout << " does not belong to current file. ";
cout << " Write format before switching file." << endl;
#endif
writer->write_metadata_to_file();
write_h5_format(writer->get_h5_file());
}
#ifdef PERF_OUTPUT
using namespace date;
using namespace chrono;
auto start_time_frame = system_clock::now();
#endif
// Write image data.
writer->write_data(raw_frames_dataset_name,
received_data.first->frame_index,
received_data.second,
received_data.first->frame_shape,
received_data.first->frame_bytes_size,
received_data.first->type,
received_data.first->endianness);
#ifdef PERF_OUTPUT
using namespace date;
using namespace chrono;
auto frame_time_difference = system_clock::now() - start_time_frame;
auto frame_diff_ms =
duration<float, milli>(frame_time_difference).count();
cout << "[" << system_clock::now() << "]";
cout << "[PSIWriter::write_h5] Frame index ";
cout << received_data.first->frame_index;
cout << " written in " << frame_diff_ms << " ms." << endl;
#endif
ring_buffer.release(received_data.first->buffer_slot_index);
#ifdef PERF_OUTPUT
using namespace date;
using namespace chrono;
auto start_time_metadata = system_clock::now();
#endif
// Write image metadata if mapping specified.
if (header_values_type) {
for (const auto& header_type : *header_values_type) {
auto& name = header_type.first;
auto value = received_data.first->header_values.at(name);
// TODO: Ugly hack until we get the start sequence in bsread.
if (name == "pulse_id") {
if (!last_pulse_id) {
last_pulse_id = *(reinterpret_cast<uint64_t*>(value.get()));
//notify_first_pulse_id(last_pulse_id);
} else {
last_pulse_id = *(reinterpret_cast<uint64_t*>(value.get()));
}
}
writer->cache_metadata(name, received_data.first->frame_index, value.get());
}
}
#ifdef PERF_OUTPUT
using namespace date;
using namespace chrono;
auto metadata_time_difference = system_clock::now() - start_time_metadata;
auto metadata_diff_ms = duration<float, milli>(metadata_time_difference).count();
cout << "[" << system_clock::now() << "]";
cout << "[ProcessManager::write_h5] Frame metadata index ";
cout << received_data.first->frame_index << " written in " << metadata_diff_ms << " ms." << endl;
#endif
}
// Send the last_pulse_id only if it was set.
if (last_pulse_id) {
//notify_last_pulse_id(last_pulse_id);
}
if (writer->is_file_open()) {
#ifdef DEBUG_OUTPUT
using namespace date;
using namespace chrono;
cout << "[" << system_clock::now() << "]";
cout << "[ProcessManager::write] Writing file format." << endl;
#endif
writer->write_metadata_to_file();
write_h5_format(writer->get_h5_file());
}
#ifdef DEBUG_OUTPUT
using namespace date;
using namespace chrono;
cout << "[" << system_clock::now() << "]";
cout << "[ProcessManager::write] Closing file " << writer_manager.get_output_file() << endl;
#endif
writer->close_file();
#ifdef DEBUG_OUTPUT
using namespace date;
using namespace chrono;
cout << "[" << system_clock::now() << "]";
cout << "[ProcessManager::write] Writer thread stopped." << endl;
#endif
writer_manager.writing_completed();
} catch (const exception& ex) {
writer_manager.writing_error(ex.what());
}
}
void PSIWriter::write_h5_format(H5::H5File& file) {
try {
H5FormatUtils::write_format(file, format, {});
} catch (const runtime_error& ex) {
using namespace date;
using namespace chrono;
cout << "[" << system_clock::now() << "]";
cout << "[ProcessManager::write_h5_format] Error while";
cout << " trying to write file format: "<< ex.what() << endl;
}
}
-48
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@@ -1,48 +0,0 @@
#ifndef PSIWRITER_H
#define PSIWRITER_H
#include <chrono>
#include "date.h"
#include <boost/thread.hpp>
#include "WriterManager.hpp"
#include "H5Format.hpp"
#include "RingBuffer.hpp"
#include "MetadataBuffer.hpp"
#include "ZmqReceiver.hpp"
class PSIWriter
{
RingBuffer& ring_buffer;
const H5Format& format;
hsize_t frames_per_file;
typedef std::unordered_map<std::string, HeaderDataType> header_map;
std::shared_ptr<header_map> header_values_type = NULL;
protected:
boost::thread writing_thread;
void write_h5(WriterManager& writer_manager,
std::string output_file,
uint64_t n_frames);
void write_h5_format(H5::H5File& file);
public:
PSIWriter(RingBuffer& ring_buffer,
const H5Format& format,
std::shared_ptr<header_map> header_values_type,
hsize_t frames_per_file=0);
void run_writer(WriterManager& writer_manager,
std::string output_file,
uint64_t n_frames);
void join_writer();
};
#endif