TEST: crop data AND mask
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@@ -168,14 +168,16 @@ def _calc_streakfinder_analysis(results, snr, mask):
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if crop_roi is None:
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region = snr
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region_mask = mask
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else:
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region = snr[crop_roi[0]: crop_roi[1], crop_roi[2]: crop_roi[3]]
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peaks = detect_peaks(region, mask, peaks_structure.rank, peak_vmin,
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region_mask = mask[crop_roi[0]: crop_roi[1], crop_roi[2]: crop_roi[3]]
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peaks = detect_peaks(region, region_mask, peaks_structure.rank, peak_vmin,
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num_threads=num_threads)
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peaks = filter_peaks(peaks, region, mask, peaks_structure, peak_vmin, npts,
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peaks = filter_peaks(peaks, region, region_mask, peaks_structure, peak_vmin, npts,
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num_threads=num_threads)
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detected = detect_streaks(peaks, region, mask, streaks_structure, xtol, streak_vmin, min_size,
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detected = detect_streaks(peaks, region, region_mask, streaks_structure, xtol, streak_vmin, min_size,
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lookahead, nfa, num_threads=num_threads)
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del peaks
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