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generalized "SPI analysis" from 2 to N ROIs (incl. N=0)

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augustin_s
2024-12-05 12:23:26 +01:00
parent b245387d79
commit 9ae4464086
1 changed files with 3 additions and 10 deletions
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13
dap/algos/spiana.py
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@ -11,17 +11,10 @@ def calc_spi_analysis(results):
spi_limit = results["spi_limit"]
roi_intensities_normalised = results["roi_intensities_normalised"]
if len(spi_limit) != 2:
return
if len(roi_intensities_normalised) < 2:
return
number_of_spots = 0
if roi_intensities_normalised[0] >= spi_limit[0]:
number_of_spots += 25
if roi_intensities_normalised[1] >= spi_limit[1]:
number_of_spots += 50
for index, (rin, sl) in enumerate(zip(roi_intensities_normalised, spi_limit)):
if rin >= sl:
number_of_spots += 25 * (index+1)
results["number_of_spots"] = number_of_spots