renamed variable pfdata to data
This commit is contained in:
@ -1,7 +1,7 @@
|
||||
import numpy as np
|
||||
|
||||
|
||||
def calc_roi(results, pfdata, roi_x1, roi_x2, roi_y1, roi_y2, pixel_mask_pf, threshold_value_choice):
|
||||
def calc_roi(results, data, roi_x1, roi_x2, roi_y1, roi_y2, pixel_mask_pf, threshold_value_choice):
|
||||
if pixel_mask_pf is None:
|
||||
return
|
||||
|
||||
@ -12,7 +12,7 @@ def calc_roi(results, pfdata, roi_x1, roi_x2, roi_y1, roi_y2, pixel_mask_pf, thr
|
||||
results["roi_intensities_proj_x"] = []
|
||||
|
||||
for iRoi in range(len(roi_x1)):
|
||||
data_roi = np.copy(pfdata[roi_y1[iRoi]:roi_y2[iRoi], roi_x1[iRoi]:roi_x2[iRoi]])
|
||||
data_roi = np.copy(data[roi_y1[iRoi]:roi_y2[iRoi], roi_x1[iRoi]:roi_x2[iRoi]])
|
||||
|
||||
roi_results[iRoi] = np.nansum(data_roi)
|
||||
if threshold_value_choice == "NaN":
|
||||
|
Reference in New Issue
Block a user