diff --git a/dap/algos/roi.py b/dap/algos/roi.py index 76775ec..c1d8bb6 100644 --- a/dap/algos/roi.py +++ b/dap/algos/roi.py @@ -1,7 +1,7 @@ import numpy as np -def calc_roi(results, pfdata, roi_x1, roi_x2, roi_y1, roi_y2, pixel_mask_pf, threshold_value_choice): +def calc_roi(results, data, roi_x1, roi_x2, roi_y1, roi_y2, pixel_mask_pf, threshold_value_choice): if pixel_mask_pf is None: return @@ -12,7 +12,7 @@ def calc_roi(results, pfdata, roi_x1, roi_x2, roi_y1, roi_y2, pixel_mask_pf, thr results["roi_intensities_proj_x"] = [] for iRoi in range(len(roi_x1)): - data_roi = np.copy(pfdata[roi_y1[iRoi]:roi_y2[iRoi], roi_x1[iRoi]:roi_x2[iRoi]]) + data_roi = np.copy(data[roi_y1[iRoi]:roi_y2[iRoi], roi_x1[iRoi]:roi_x2[iRoi]]) roi_results[iRoi] = np.nansum(data_roi) if threshold_value_choice == "NaN":