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added mill argument

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augustin_s
2025-04-25 11:52:34 +02:00
parent 3ecf6d27dc
commit 2ec0efd18f
1 changed files with 4 additions and 4 deletions
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8
scripts/index_data.sh
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@ -60,9 +60,9 @@ then
if [ -e ${CONFIG_DIR}/run_index.${PROTEIN_NAME}.sh ] if [ -e ${CONFIG_DIR}/run_index.${PROTEIN_NAME}.sh ]
then then
${CONFIG_DIR}/run_index.${PROTEIN_NAME}.sh ${FILELST} ${FILEN}.geom ${FILEN}.cell ${FILEN}.stream > ${FILEN}.out 2>${FILEN}.err ${CONFIG_DIR}/run_index.${PROTEIN_NAME}.sh ${FILELST} ${FILEN}.geom ${FILEN}.cell ${FILEN}.stream ${FILEN}-mill > ${FILEN}.out 2>${FILEN}.err
else else
${CONFIG_DIR}/run_index.sh ${FILELST} ${FILEN}.geom ${FILEN}.cell ${FILEN}.stream > ${FILEN}.out 2>${FILEN}.err ${CONFIG_DIR}/run_index.sh ${FILELST} ${FILEN}.geom ${FILEN}.cell ${FILEN}.stream ${FILEN}-mill > ${FILEN}.out 2>${FILEN}.err
fi fi
module purge module purge
@ -110,9 +110,9 @@ then
if [ -e ${CONFIG_DIR}/run_index.${PROTEIN_NAME}.sh ] if [ -e ${CONFIG_DIR}/run_index.${PROTEIN_NAME}.sh ]
then then
${CONFIG_DIR}/run_index.${PROTEIN_NAME}.sh ${FILELST} ${FILEN}.geom ${FILEN}.cell_alternative ${FILEN}.stream_alternative > ${FILEN}.out_alternative 2>${FILEN}.err_alternative ${CONFIG_DIR}/run_index.${PROTEIN_NAME}.sh ${FILELST} ${FILEN}.geom ${FILEN}.cell_alternative ${FILEN}.stream_alternative ${FILEN}-mill_alternative > ${FILEN}.out_alternative 2>${FILEN}.err_alternative
else else
${CONFIG_DIR}/run_index.sh ${FILELST} ${FILEN}.geom ${FILEN}.cell_alternative ${FILEN}.stream_alternative > ${FILEN}.out_alternative 2>${FILEN}.err_alternative ${CONFIG_DIR}/run_index.sh ${FILELST} ${FILEN}.geom ${FILEN}.cell_alternative ${FILEN}.stream_alternative ${FILEN}-mill_alternative > ${FILEN}.out_alternative 2>${FILEN}.err_alternative
fi fi
rm -rf ${FILEN}.cell_alternative rm -rf ${FILEN}.cell_alternative