From 2ec0efd18f75607c4bb413c34c185d76569471d7 Mon Sep 17 00:00:00 2001 From: Sven Augustin Date: Fri, 25 Apr 2025 11:52:34 +0200 Subject: [PATCH] added mill argument --- scripts/index_data.sh | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/scripts/index_data.sh b/scripts/index_data.sh index 4368cd6..7d03ec3 100644 --- a/scripts/index_data.sh +++ b/scripts/index_data.sh @@ -60,9 +60,9 @@ then if [ -e ${CONFIG_DIR}/run_index.${PROTEIN_NAME}.sh ] then - ${CONFIG_DIR}/run_index.${PROTEIN_NAME}.sh ${FILELST} ${FILEN}.geom ${FILEN}.cell ${FILEN}.stream > ${FILEN}.out 2>${FILEN}.err + ${CONFIG_DIR}/run_index.${PROTEIN_NAME}.sh ${FILELST} ${FILEN}.geom ${FILEN}.cell ${FILEN}.stream ${FILEN}-mill > ${FILEN}.out 2>${FILEN}.err else - ${CONFIG_DIR}/run_index.sh ${FILELST} ${FILEN}.geom ${FILEN}.cell ${FILEN}.stream > ${FILEN}.out 2>${FILEN}.err + ${CONFIG_DIR}/run_index.sh ${FILELST} ${FILEN}.geom ${FILEN}.cell ${FILEN}.stream ${FILEN}-mill > ${FILEN}.out 2>${FILEN}.err fi module purge @@ -110,9 +110,9 @@ then if [ -e ${CONFIG_DIR}/run_index.${PROTEIN_NAME}.sh ] then - ${CONFIG_DIR}/run_index.${PROTEIN_NAME}.sh ${FILELST} ${FILEN}.geom ${FILEN}.cell_alternative ${FILEN}.stream_alternative > ${FILEN}.out_alternative 2>${FILEN}.err_alternative + ${CONFIG_DIR}/run_index.${PROTEIN_NAME}.sh ${FILELST} ${FILEN}.geom ${FILEN}.cell_alternative ${FILEN}.stream_alternative ${FILEN}-mill_alternative > ${FILEN}.out_alternative 2>${FILEN}.err_alternative else - ${CONFIG_DIR}/run_index.sh ${FILELST} ${FILEN}.geom ${FILEN}.cell_alternative ${FILEN}.stream_alternative > ${FILEN}.out_alternative 2>${FILEN}.err_alternative + ${CONFIG_DIR}/run_index.sh ${FILELST} ${FILEN}.geom ${FILEN}.cell_alternative ${FILEN}.stream_alternative ${FILEN}-mill_alternative > ${FILEN}.out_alternative 2>${FILEN}.err_alternative fi rm -rf ${FILEN}.cell_alternative