This commit is contained in:
gac-x11ma
2020-02-12 15:47:58 +01:00
parent fa4c6919ff
commit 7f8ef858f4
7 changed files with 88 additions and 18 deletions
+5 -5
View File
@@ -1,12 +1,12 @@
#Tue Feb 11 17:02:23 CET 2020
#Wed Feb 12 00:37:11 CET 2020
HARMONIC_ID_1=1
ALPHA_ID_2=0.0
ENERGY=708.5
ENERGY=710.8
ALPHA_ID_1=0.0
POL_ID_2=Circ_Minus
POL_ID_1=Circ_Plus
POL_ID_2=Lin_Hor
POL_ID_1=Lin_Hor
OFFSET_ID_1=-2.5
NORM_FILE=/sls/X11MA/data/X11MA/Data1/public/PEEM/2020_02/20200206/Take_Image_402/0/i402_1_0.tif
ID=ID1_ID2
ID=ID2
OFFSET_ID_2=-2.5
HARMONIC_ID_2=1
+2 -2
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@@ -1,2 +1,2 @@
#Tue Feb 11 17:26:16 CET 2020
FileSequentialNumber=577
#Wed Feb 12 15:36:01 CET 2020
FileSequentialNumber=628
+2 -2
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@@ -1,4 +1,4 @@
#Mon Feb 10 22:27:33 CET 2020
#Wed Feb 12 11:25:27 CET 2020
spatialCalOffsetY=NaN
spatialCalOffsetX=NaN
colormapLogarithmic=false
@@ -6,7 +6,7 @@ scale=1.0
grayscale=false
spatialCalScaleX=NaN
spatialCalScaleY=NaN
colormapMax=1.5
colormapMax=0.5
rescaleOffset=0.0
roiWidth=-1
colormap=Grayscale
+20 -5
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@@ -141,12 +141,16 @@ def remove_outliers(imgdata, threshold = 1e9, replace_value=None):
return data
"""
def _save_as_tiff(data, filename, check=False, show = False):
def _save_as_tiff(data, filename, check=False, show = False, metadata={}):
if type(data) == Data:
ip = load_array(data.matrix)
else:
ip = data
info = "Timestamp: " + time.strftime("%y/%m/%d %H:%M:%S",time.localtime())
for key,val in metadata.items():
info = info + "\n" + str(key) + ": " + str(val)
ip.setProperty("Info", info)
data = get_ip_array(ip)
if not os.path.exists(os.path.dirname(filename)):
os.makedirs(os.path.dirname(filename))
@@ -159,12 +163,11 @@ def _save_as_tiff(data, filename, check=False, show = False):
print (" ------> Error reading array: " + str(filename))
def save_as_tiff(data, filename, check=False, show = False, parallel=True):
def save_as_tiff(data, filename, check=False, show = False, parallel=True, metadata={}):
if parallel:
return fork((_save_as_tiff,(data, filename, check, show)),)
return fork((_save_as_tiff,(data, filename, check, show, metadata)),)
else:
_save_as_tiff(data, filename, check, show)
_save_as_tiff(data, filename, check, show, metadata)
def trigger_eiger(wait=False):
eiger.start()
@@ -172,6 +175,18 @@ def trigger_eiger(wait=False):
eiger.waitNewImage(20000)
def set_exposure_time(exposure):
if exposure == eiger.getExposure():
return
started = eiger.isStarted()
if started:
eiger.stop()
time.sleep(0.2)
eiger.setExposure(exposure)
if started:
if eiger.grabMode==eiger.GrabMode.Continuous:
eiger.start()
if False:
integrate_roi(image, 10, 5, 20, 10)
+4 -2
View File
@@ -33,7 +33,7 @@ if METHOD == "Two_Energies":
start = time.time()
threads = []
path = "{data}/{year}_{month}/{date}" + "/" + "{seq}%03d_" + METHOD
set_exec_pars(path= path, format="txt", layout="table", open=True)
data_path = get_context().setup.expandPath(path)
@@ -165,6 +165,8 @@ def save_image_file(frame, cycle=-1, frame_index=0):
# log("SV:"+Format(startvoltage,"0.000")+" OB:"+Format(objective,"0.00")+" ST:"+Format(LEEMtemp,"0.0"))
eiger.stop()
eiger.grabMode=eiger.GrabMode.Single
time.sleep(0.3)
try:
#Do the measurement loop
@@ -182,7 +184,7 @@ try:
for i in range(2):
if (cycle == 1) or (METHOD != "Take_Image"):
assert_status_ok()
assert_status_ok()
set_exposure_time(EXPOSURE[i])
print "--- Grabing " + str(AVERAGE[i])+ " frames - cycle: " + str(cycle) + " step: " + str(i)
ret = grab_frames(image, AVERAGE[i], roi=None, wait_next=True)
+3 -2
View File
@@ -19,9 +19,10 @@ start = time.time()
eiger.stop()
eiger.grabMode=eiger.GrabMode.Single
eiger.setExposure(EXPOSURE)
time.sleep(0.3)
set_exposure_time(EXPOSURE)
set_exec_pars(path="{data}/{year}_{month}/{date}/AbsortionSpectrum_{seq}%03d", format="csv", layout="table")
set_exec_pars(path="{data}/{year}_{month}/{date}/{seq}%03d_AbsortionSpectrum", format="csv", layout="table")
tag= "AbsortionSpectrum_{seq}%03d"
rois = create_roi_devices(ROI)
+52
View File
@@ -0,0 +1,52 @@
EXPOSURE=1.0
"""
while True:
eiger.stop()
eiger.grabMode=eiger.GrabMode.Single
time.sleep(1.2)
print "-------------"
for i in range(10):
eiger.stop()
time.sleep(0.2)
eiger.setExposure(EXPOSURE)
eiger.start()
image.waitNext(20000)
rb=caget("X11MA-ES1-SD1:cam1:AcquireTime_RBV",'d')
if abs(rb - EXPOSURE) >0.0001:
raise Exception("Error: " + str(EXPOSURE) + " - " + str(rb))
print EXPOSURE
EXPOSURE=EXPOSURE+0.1
#time.sleep(2.0)
eiger.grabMode=eiger.GrabMode.Continuous
eiger.start()
time.sleep(0.25)
"""
while True:
eiger.stop()
eiger.grabMode=eiger.GrabMode.Single
#time.sleep(0.2)
print "-------------"
for i in range(10):
set_exposure_time(EXPOSURE)
eiger.start()
image.waitNext(20000)
rb=caget("X11MA-ES1-SD1:cam1:AcquireTime_RBV",'d')
if abs(rb - EXPOSURE) >0.0001:
raise Exception("Error: " + str(EXPOSURE) + " - " + str(rb))
print EXPOSURE
EXPOSURE=EXPOSURE+0.1
#time.sleep(2.0)
eiger.grabMode=eiger.GrabMode.Continuous
eiger.start()
time.sleep(0.25)