Closedown
This commit is contained in:
gac-x03da
@@ -1,4 +1,4 @@
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#Wed Jun 15 17:37:31 CEST 2022
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#Thu Jun 30 12:18:32 CEST 2022
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autoSaveScanData=true
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simulation=false
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commandExecutionEvents=false
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@@ -26,7 +26,7 @@ dataServerPort=-1
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hideServerMessages=false
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serverPort=8080
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versionTrackingEnabled=true
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dataPath={data}/{year}/{month}/pereira/pshell-{date}-{time}-{name}
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dataPath={data}/{year}/{month}/karadan/pshell-{date}-{time}-{name}
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serverEnabled=false
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dataScanReleaseRecords=true
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depthDimension=2
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@@ -1,7 +1,7 @@
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#Sat Jun 18 22:38:26 CEST 2022
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pgroup=p19571
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proposal=20211675
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proposer=pereira
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#Thu Jun 30 12:19:13 CEST 2022
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pgroup=p19764
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proposal=20220567
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proposer=karadan
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prefix=
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sample=hBN
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authors=Zviadi Zarkua, Muhammad Saad, Matz Nissen, Renan Villarreal
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sample=Si reference
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authors=KaradanPrajith
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@@ -1,4 +1,4 @@
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#Tue Jun 21 05:01:07 CEST 2022
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LastRunDate=220621
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FileSequentialNumber=13130
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DaySequentialNumber=8
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#Mon Jul 04 12:51:10 CEST 2022
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LastRunDate=220704
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FileSequentialNumber=13220
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DaySequentialNumber=3
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@@ -1,4 +1,4 @@
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#Tue Jun 21 04:04:33 CEST 2022
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#Wed Jun 22 11:59:03 CEST 2022
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spatialCalOffsetY=NaN
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spatialCalOffsetX=NaN
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dataPolling=500
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@@ -11,7 +11,7 @@ spatialCalScaleY=NaN
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colormapMax=150.0
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rescaleOffset=0.0
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roiWidth=-1
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colormap=Temperature
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colormap=Grayscale
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pollingBackground=false
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invert=false
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colormapMin=0.0
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@@ -1,43 +0,0 @@
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import ch.psi.pshell.plot.RangeSelectionPlot.RangeSelection as RangeSelection
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REFERENCE_POSITION = {'X':1.2 ,'Y':0.0, 'Z':110.6, 'Theta':-9.1, 'Tilt':0.8, 'Phi':-90.0}
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SAMPLE_POSITION = {'X':0.65 ,'Y':0.0, 'Z':115.0, 'Theta':-9.1, 'Tilt':0.8, 'Phi':-90.0}
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def move_to_position(pdict):
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ManipulatorX.move(pdict['X'])
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ManipulatorY.move(pdict['Y'])
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ManipulatorZ.move(pdict['Z'])
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ManipulatorTheta.move(pdict['Theta'])
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ManipulatorTilt.move(pdict['Tilt'])
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ManipulatorPhi.move(pdict['Phi'])
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#Au600
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move_to_position(REFERENCE_POSITION)
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rs = RangeSelection(347.0,354.0)
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rs.setVars([1., 1., 1, 800.]) #Time, Size, Iteration, photon energy
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set_exec_pars(name="Scan1")
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run("XPSSpectrum", {"save_scienta_image":True,
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"ranges":[rs, ],
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"ENDSCAN":False,
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"pass_energy":100})
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set_exec_pars(open=False)
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set_exec_pars(name="Scan2")
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#flush_data()
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#In600
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move_to_position(SAMPLE_POSITION)
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#rs = RangeSelection(140.0,153.0)
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rs = RangeSelection(347.0,354.0)
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rs.setVars([1., 1., 1, 800.]) #Time, Size, Iteration, photon energy
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run("XPSSpectrum", {"save_scienta_image":True,
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"ranges":[rs, ],
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"ENDSCAN":False,
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"pass_energy":100})
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flush_data()
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@@ -1,343 +0,0 @@
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"""
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Line/vector/area/holo scan of multiple spectral regions
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save this script into your script/user folder before editing!
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usage:
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1. uncomment one of the MOTORS lines.
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add another line if necessary.
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2. uncomment one of the scan blocks and adjust the parameters.
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add another block if necessary.
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3. declare the regions.
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4. add the regions to the REGIONS list.
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5. run the script.
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"""
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# dummy scan (time series)
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MOTORS = [Eph]
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# photon energy scan (do not include 'ephot' in regions in this case!)
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#MOTORS = [Eph]
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# phi scan
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#MOTORS = [ManipulatorPhi]
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# holo scan
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#MOTORS = (ManipulatorPhi, ManipulatorTheta)
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# 2D YZ scan
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#MOTORS = [ManipulatorY, ManipulatorZ]
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# line scan [start, stop, step]
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#POSITIONS = [0., 10., 0.5]
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#SCAN = 'lscan'
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# vector scan [pos1, pos2, pos3, ...]
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POSITIONS = [600., 900.]
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SCAN = 'vscan'
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# area scan [(start1, start2), (stop1, stop2), (step1, step2)]
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# corresponding to (positioner1, positioner2)
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#POSITIONS = [(-1., 114.), (+1., 116.), (20, 20)]
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#ZIGZAG = True
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#SCAN = 'ascan'
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# holo scan
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#PHI_RANGE = (-160.0, 160.0) # (tuple (min, max))
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#THETA_RANGE = (-9.0, 81.0) # (tuple (min, max))
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#STEPS = (40.0, 1.0) # (tuple (phi, theta))
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#ZIGZAG = True
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#POSITIONS = [(PHI_RANGE[0], THETA_RANGE[0]), (PHI_RANGE[1], THETA_RANGE[1]), STEPS]
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#SCAN = 'ascan'
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# seconds to wait between positioning command and triggering the detector
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LATENCY = 0.0
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# region setup
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#
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# for each region, define a python dictionary with the following items.
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# optional items can be left unspecified and will default to the indicated values.
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# for swept mode, include 'elo', 'ehi', 'estep', 'iter' values, but do not include 'efix'.
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# for fixed mode, include 'efix' value, but do not include 'elo', 'ehi', 'estep', 'iter'.
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#
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# 'name': user-specific name of the region (for graph title and RegionName attribute in data file)
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# 'elo': lower kinetic energy boundary of the spectrum
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# 'ehi': upper kinetic energy boundary of the spectrum
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# 'estep': energy step size
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# 'efix': center kinetic energy in fixed mode
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# 'epass': pass energy
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# 'ephot': photon energy (default: unchanged)
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# 'tstep': dwell time in seconds
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# 'iter': number of iterations/sweeps (default 1)
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# 'cis': True = constant initial state (photoemission line), False = constant final state (Auger peak), (default False)
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# 'slit': exit slit (default: unchanged)
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# First window should be set to first photon energy (see energies above)
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REFERENCE_POSITION = {'X':1.2 ,'Y':0.0, 'Z':110.6, 'Theta':-9.1, 'Tilt':0.9, 'Phi':-90.0}
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SAMPLE_POSITION = {'X':0.65 ,'Y':0.0, 'Z':115.0, 'Theta':-9.1, 'Tilt':0.9, 'Phi':-90.0}
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REGION1 = {'name': 'AuFermi', 'ephot':600. , 'elo': 595., 'ehi':597.0, 'estep':0.1, 'epass': 20., 'tstep': 1., 'iter': 1, 'cis': False, 'position': 'reference'}
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REGION2 = {'name': 'In3d','ephot':600., 'elo': 140., 'ehi':153.0, 'estep':0.1, 'epass': 20., 'tstep': 1., 'iter': 1, 'cis': False, 'position': 'sample'}
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REGION3 = {'name': 'AuFermi', 'ephot':900. , 'elo': 895., 'ehi':897.0, 'estep':0.1, 'epass': 20., 'tstep': 1., 'iter': 1, 'cis': False, 'position': 'reference'}
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REGION4 = {'name': 'Au4f', 'ephot':900. , 'elo': 895., 'ehi':897.0, 'estep':0.1, 'epass': 20., 'tstep': 1., 'iter': 1, 'cis': False, 'position': 'reference'}
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REGION5 = {'name': 'In3d','ephot':900., 'elo': 440., 'ehi':453.0, 'estep':0.1, 'epass': 20., 'tstep': 1., 'iter': 1, 'cis': False, 'position': 'sample'}
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# list of region dictionaries to execute at each scan position
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REGIONS = [REGION1, REGION2, REGION3, REGION4]
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# close beam shutter and turn off analyser at the end of the scan
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CLOSE_SHUTTER_AT_END = True
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def move_to_position(pdict):
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ManipulatorX.move(pdict['X'])
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ManipulatorY.move(pdict['Y'])
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ManipulatorZ.move(pdict['Z'])
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ManipulatorTheta.move(pdict['Theta'])
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ManipulatorTilt.move(pdict['Tilt'])
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ManipulatorPhi.move(pdict['Phi'])
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# --- DO NOT EDIT BELOW THIS LINE! ---
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set_exec_pars(keep=False)
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def check_region(region):
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"""
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check region dictionary items and apply defaults where necessary
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"""
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region['fixed'] = 'efix' in region
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if region['fixed']:
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region['elo'] = region['efix']
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region['ehi'] = region['efix']
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if 'iter' not in region:
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region['iter'] = 1
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print("region {0}: setting default iter = {1}".format(region['name'], region['iter']))
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if 'cis' not in region:
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region['cis'] = False
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print("region {0}: setting default cis = {1}".format(region['name'], region['cis']))
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class SpectrumReader(ReadonlyRegisterBase, ReadonlyRegisterArray):
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def initialize(self):
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#super(SpectrumReader, self).initialize()
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self.scan_index = -1
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def create_datasets(self):
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path = get_exec_pars().scanPath + self.region_name + "/"
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if self.region['fixed']:
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self.channel_center_dataset_name = path + "ScientaChannelCenter"
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create_dataset(self.channel_center_dataset_name, 'd')
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else:
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self.channel_begin_dataset_name = path + "ScientaChannelBegin"
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self.channel_end_dataset_name = path + "ScientaChannelEnd"
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self.step_energy_dataset_name = path + "ScientaStepEnergy"
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create_dataset(self.channel_begin_dataset_name, 'd')
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create_dataset(self.channel_end_dataset_name, 'd')
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create_dataset(self.step_energy_dataset_name, 'd')
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if 'epass' in self.region:
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self.pass_energy_dataset_name = path + "ScientaPassEnergy"
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create_dataset(self.pass_energy_dataset_name, 'd')
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if 'tstep' in self.region:
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self.step_time_dataset_name = path + "ScientaStepTime"
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create_dataset(self.step_time_dataset_name, 'd')
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if 'iter' in self.region:
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self.iterations_dataset_name = path + "ScientaIterations"
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create_dataset(self.iterations_dataset_name, 'd')
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if 'slit' in self.region:
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self.slit_dataset_name = path + "ExitSlit"
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create_dataset(self.slit_dataset_name, 'd')
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if 'position' in self.region:
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position_names = {key:path + "Position"+ key for key in ['X','Y','Z','Theta','Tilt','Phi']}
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self.position_dataset_names = position_names
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for datanames in self.position_dataset_names.values():
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create_dataset(datanames, 'd')
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def setup(self):
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# print("spectrum.setup")
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if self.scan_index != get_exec_pars().index:
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self.scan_index = get_exec_pars().index
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self.create_datasets()
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if self.region_index == 0:
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print "scan {0}".format(self.scan_index)
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edelta = 0.0
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try:
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ephot = self.region['ephot']
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Eph.move(ephot)
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except KeyError:
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ephot = Eph.take(100)
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if isinstance(ephot, float) and ephot > 0.:
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try:
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if self.region['cis']:
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edelta = ephot - self.ephot_start
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except AttributeError:
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self.ephot_start = ephot
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elo = self.region['elo'] + edelta
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ehi = self.region['ehi'] + edelta
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if self.region['fixed']:
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Scienta.setAcquisitionMode(ch.psi.pshell.epics.Scienta.AcquisitionMode.Fixed)
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Scienta.centerEnergy.write(elo)
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append_dataset(self.channel_center_dataset_name, elo)
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else:
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Scienta.setAcquisitionMode(ch.psi.pshell.epics.Scienta.AcquisitionMode.Swept)
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Scienta.lowEnergy.write(elo)
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Scienta.highEnergy.write(ehi)
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Scienta.stepSize.write(self.region['estep'])
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append_dataset(self.channel_begin_dataset_name, elo)
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append_dataset(self.channel_end_dataset_name, ehi)
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append_dataset(self.step_energy_dataset_name, self.region['estep'])
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try:
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Scienta.setPassEnergy(int(self.region['epass']))
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append_dataset(self.pass_energy_dataset_name, self.region['epass'])
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except KeyError:
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pass
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try:
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Scienta.stepTime.write(self.region['tstep'])
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append_dataset(self.step_time_dataset_name, self.region['tstep'])
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except KeyError:
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pass
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try:
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Scienta.setIterations(self.region['iter'])
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append_dataset(self.iterations_dataset_name, self.region['iter'])
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except KeyError:
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pass
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try:
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ExitSlit.write(self.region['slit'])
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append_dataset(self.slit_dataset_name, self.region['slit'])
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except KeyError:
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pass
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if self.region['position'] == 'sample':
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move_to_position(SAMPLE_POSITION)
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for name in SAMPLE_POSITION.keys():
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append_dataset(self.position_dataset_names[name], SAMPLE_POSITION[name])
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elif self.region['position'] == 'reference':
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move_to_position(REFERENCE_POSITION)
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for name in REFERENCE_POSITION.keys():
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append_dataset(self.position_dataset_names[name], SAMPLE_POSITION[name])
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Scienta.update()
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def read(self):
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# print("spectrum.read")
|
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global current_region_index
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current_region_index = self.region_index
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self.setup()
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print("Acquiring region {0}.".format(self.region['name']))
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trig_scienta()
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time.sleep(0.5)
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sp = Scienta.getSpectrum().read()
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return sp
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||||
def getSize(self):
|
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if self.region['fixed']:
|
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nx = 992
|
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else:
|
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nx = int((self.region['ehi'] - self.region['elo']) / self.region['estep']) + 1
|
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return nx
|
||||
|
||||
|
||||
class ImageReader(ReadonlyRegisterBase, ReadonlyRegisterMatrix):
|
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def read(self):
|
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# print("image.read")
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||||
return Scienta.getDataMatrix().read()
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||||
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||||
def getWidth(self):
|
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if self.region['fixed']:
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||||
nx = 992
|
||||
else:
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||||
nx = int((self.region['ehi'] - self.region['elo']) / self.region['estep']) + 1
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||||
return nx
|
||||
|
||||
def getHeight(self):
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ny = Scienta.slices.read()
|
||||
return ny
|
||||
|
||||
def setup_live_plots(regions):
|
||||
global live_plots
|
||||
global current_region_index
|
||||
names = [region['name'] for region in regions]
|
||||
live_plots = plot(None, names, title="Live Spectra")
|
||||
current_region_index = 0
|
||||
|
||||
def update_live_plots():
|
||||
global live_plots
|
||||
global current_region_index
|
||||
try:
|
||||
while get_context().state.running:
|
||||
y = Scienta.spectrum.take(100)
|
||||
x = Scienta.spectrumX
|
||||
try:
|
||||
series = live_plots[current_region_index].getSeries(0)
|
||||
series.setData(x, y)
|
||||
except IndexError:
|
||||
pass
|
||||
time.sleep(1.0)
|
||||
finally:
|
||||
print "Stopping live spectra"
|
||||
|
||||
def do_scan(scan, motors, positions, regions, latency):
|
||||
global SENSORS
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||||
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||||
SENSORS = []
|
||||
|
||||
for (index, region) in enumerate(regions):
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||||
check_region(region)
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||||
|
||||
reader = SpectrumReader()
|
||||
reader.region_index = index
|
||||
reader.region_name = "region{0}".format(index + 1)
|
||||
reader.region = region
|
||||
reader.initialize()
|
||||
set_device_alias(reader, reader.region_name + "/ScientaSpectrum")
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||||
SENSORS.append(reader)
|
||||
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||||
image = ImageReader()
|
||||
image.region_index = index
|
||||
image.region = region
|
||||
image.initialize()
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||||
set_device_alias(image, reader.region_name + "/ScientaImage")
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||||
SENSORS.append(image)
|
||||
|
||||
SENSORS.append(SampleCurrent)
|
||||
SENSORS.append(RefCurrent)
|
||||
adjust_sensors()
|
||||
set_adc_averaging()
|
||||
|
||||
if scan == 'ascan':
|
||||
ascan(motors, SENSORS, positions[0], positions[1], positions[2], latency, False, zigzag = True, before_read=wait_beam, after_read = after_readout)
|
||||
elif scan == 'lscan':
|
||||
lscan(motors, SENSORS, positions[0], positions[1], positions[2], latency, False, before_read=wait_beam, after_read = after_readout)
|
||||
elif scan == 'vscan':
|
||||
vscan(motors, SENSORS, positions, True, latency,False, before_read=wait_beam, after_read = after_readout)
|
||||
else:
|
||||
print('unknown scan mode {}'.format(scan))
|
||||
|
||||
for (index, region) in enumerate(regions):
|
||||
set_attribute(get_exec_pars().scanPath + "region{0}/ScientaSpectrum".format(index + 1), "RegionName", region['name'])
|
||||
set_attribute(get_exec_pars().scanPath + "region{0}/ScientaImage".format(index + 1), "RegionName", region['name'])
|
||||
set_attribute(get_exec_pars().scanPath, "Regions", [region['name'] for region in regions])
|
||||
|
||||
try:
|
||||
setup_live_plots(REGIONS)
|
||||
task = fork(update_live_plots)
|
||||
do_scan(SCAN, MOTORS, POSITIONS, REGIONS, LATENCY)
|
||||
finally:
|
||||
if CLOSE_SHUTTER_AT_END:
|
||||
after_scan()
|
||||
|
||||
@@ -1,340 +0,0 @@
|
||||
"""
|
||||
Line/vector/area/holo scan of multiple spectral regions
|
||||
|
||||
save this script into your script/user folder before editing!
|
||||
|
||||
usage:
|
||||
1. uncomment one of the MOTORS lines.
|
||||
add another line if necessary.
|
||||
2. uncomment one of the scan blocks and adjust the parameters.
|
||||
add another block if necessary.
|
||||
3. declare the regions.
|
||||
4. add the regions to the REGIONS list.
|
||||
5. run the script.
|
||||
"""
|
||||
|
||||
# dummy scan (time series)
|
||||
MOTORS = [dummy]
|
||||
# photon energy scan (do not include 'ephot' in regions in this case!)
|
||||
#MOTORS = [Eph]
|
||||
# phi scan
|
||||
#MOTORS = [ManipulatorPhi]
|
||||
# holo scan
|
||||
#MOTORS = (ManipulatorPhi, ManipulatorTheta)
|
||||
# 2D YZ scan
|
||||
#MOTORS = [ManipulatorY, ManipulatorZ]
|
||||
|
||||
# line scan [start, stop, step]
|
||||
POSITIONS = [0.]
|
||||
SCAN = 'vscan'
|
||||
|
||||
# vector scan [pos1, pos2, pos3, ...]
|
||||
#POSITIONS = [600., 900.]
|
||||
#SCAN = 'vscan'
|
||||
|
||||
# area scan [(start1, start2), (stop1, stop2), (step1, step2)]
|
||||
# corresponding to (positioner1, positioner2)
|
||||
#POSITIONS = [(-1., 114.), (+1., 116.), (20, 20)]
|
||||
#ZIGZAG = True
|
||||
#SCAN = 'ascan'
|
||||
|
||||
# holo scan
|
||||
#PHI_RANGE = (-160.0, 160.0) # (tuple (min, max))
|
||||
#THETA_RANGE = (-9.0, 81.0) # (tuple (min, max))
|
||||
#STEPS = (40.0, 1.0) # (tuple (phi, theta))
|
||||
#ZIGZAG = True
|
||||
#POSITIONS = [(PHI_RANGE[0], THETA_RANGE[0]), (PHI_RANGE[1], THETA_RANGE[1]), STEPS]
|
||||
#SCAN = 'ascan'
|
||||
|
||||
# seconds to wait between positioning command and triggering the detector
|
||||
LATENCY = 0.0
|
||||
|
||||
|
||||
# region setup
|
||||
#
|
||||
# for each region, define a python dictionary with the following items.
|
||||
# optional items can be left unspecified and will default to the indicated values.
|
||||
# for swept mode, include 'elo', 'ehi', 'estep', 'iter' values, but do not include 'efix'.
|
||||
# for fixed mode, include 'efix' value, but do not include 'elo', 'ehi', 'estep', 'iter'.
|
||||
#
|
||||
# 'name': user-specific name of the region (for graph title and RegionName attribute in data file)
|
||||
# 'elo': lower kinetic energy boundary of the spectrum
|
||||
# 'ehi': upper kinetic energy boundary of the spectrum
|
||||
# 'estep': energy step size
|
||||
# 'efix': center kinetic energy in fixed mode
|
||||
# 'epass': pass energy
|
||||
# 'ephot': photon energy (default: unchanged)
|
||||
# 'tstep': dwell time in seconds
|
||||
# 'iter': number of iterations/sweeps (default 1)
|
||||
# 'cis': True = constant initial state (photoemission line), False = constant final state (Auger peak), (default False)
|
||||
# 'slit': exit slit (default: unchanged)
|
||||
|
||||
# First window should be set to first photon energy (see energies above)
|
||||
|
||||
REFERENCE_POSITION = {'X':3.01 ,'Y':0, 'Z':118, 'Theta':-6.2, 'Tilt':0, 'Phi':0}
|
||||
SAMPLE_POSITION = {'X':3.01 ,'Y':0, 'Z':118, 'Theta':-6.2, 'Tilt':0, 'Phi':0}
|
||||
|
||||
REGION1 = {'name': 'AuFermi', 'ephot':144. , 'elo': 138.5, 'ehi':140, 'estep':0.01, 'epass': 10., 'tstep': 1., 'iter': 1, 'cis': False, 'position': 'reference'}
|
||||
REGION2 = {'name': 'VB','ephot':144., 'elo': 138.4, 'ehi':139.8, 'estep':0.01, 'epass': 10., 'tstep': 4., 'iter': 1, 'cis': False, 'position': 'sample'}
|
||||
REGION3 = {'name': 'As3d','ephot':144., 'elo': 96., 'ehi':101.0, 'estep':0.03, 'epass': 10., 'tstep': 1., 'iter': 1, 'cis': False, 'position': 'sample'}
|
||||
|
||||
|
||||
# list of region dictionaries to execute at each scan position
|
||||
REGIONS = [REGION1, REGION2]#, REGION3, REGION4, REGION5]
|
||||
|
||||
# close beam shutter and turn off analyser at the end of the scan
|
||||
CLOSE_SHUTTER_AT_END = False
|
||||
|
||||
def move_to_position(pdict):
|
||||
ManipulatorX.move(pdict['X'])
|
||||
ManipulatorY.move(pdict['Y'])
|
||||
ManipulatorZ.move(pdict['Z'])
|
||||
ManipulatorTheta.move(pdict['Theta'])
|
||||
ManipulatorTilt.move(pdict['Tilt'])
|
||||
ManipulatorPhi.move(pdict['Phi'])
|
||||
|
||||
# --- DO NOT EDIT BELOW THIS LINE! ---
|
||||
|
||||
|
||||
set_exec_pars(keep=False)
|
||||
|
||||
def check_region(region):
|
||||
"""
|
||||
check region dictionary items and apply defaults where necessary
|
||||
"""
|
||||
region['fixed'] = 'efix' in region
|
||||
if region['fixed']:
|
||||
region['elo'] = region['efix']
|
||||
region['ehi'] = region['efix']
|
||||
if 'iter' not in region:
|
||||
region['iter'] = 1
|
||||
print("region {0}: setting default iter = {1}".format(region['name'], region['iter']))
|
||||
if 'cis' not in region:
|
||||
region['cis'] = False
|
||||
print("region {0}: setting default cis = {1}".format(region['name'], region['cis']))
|
||||
|
||||
class SpectrumReader(ReadonlyRegisterBase, ReadonlyRegisterArray):
|
||||
def initialize(self):
|
||||
#super(SpectrumReader, self).initialize()
|
||||
self.scan_index = -1
|
||||
|
||||
def create_datasets(self):
|
||||
path = get_exec_pars().scanPath + self.region_name + "/"
|
||||
|
||||
if self.region['fixed']:
|
||||
self.channel_center_dataset_name = path + "ScientaChannelCenter"
|
||||
create_dataset(self.channel_center_dataset_name, 'd')
|
||||
else:
|
||||
self.channel_begin_dataset_name = path + "ScientaChannelBegin"
|
||||
self.channel_end_dataset_name = path + "ScientaChannelEnd"
|
||||
self.step_energy_dataset_name = path + "ScientaStepEnergy"
|
||||
create_dataset(self.channel_begin_dataset_name, 'd')
|
||||
create_dataset(self.channel_end_dataset_name, 'd')
|
||||
create_dataset(self.step_energy_dataset_name, 'd')
|
||||
|
||||
if 'epass' in self.region:
|
||||
self.pass_energy_dataset_name = path + "ScientaPassEnergy"
|
||||
create_dataset(self.pass_energy_dataset_name, 'd')
|
||||
if 'tstep' in self.region:
|
||||
self.step_time_dataset_name = path + "ScientaStepTime"
|
||||
create_dataset(self.step_time_dataset_name, 'd')
|
||||
if 'iter' in self.region:
|
||||
self.iterations_dataset_name = path + "ScientaIterations"
|
||||
create_dataset(self.iterations_dataset_name, 'd')
|
||||
if 'slit' in self.region:
|
||||
self.slit_dataset_name = path + "ExitSlit"
|
||||
create_dataset(self.slit_dataset_name, 'd')
|
||||
if 'position' in self.region:
|
||||
position_names = {key:path + "Position"+ key for key in ['X','Y','Z','Theta','Tilt','Phi']}
|
||||
self.position_dataset_names = position_names
|
||||
for datanames in self.position_dataset_names.values():
|
||||
create_dataset(datanames, 'd')
|
||||
|
||||
|
||||
|
||||
def setup(self):
|
||||
# print("spectrum.setup")
|
||||
|
||||
if self.scan_index != get_exec_pars().index:
|
||||
self.scan_index = get_exec_pars().index
|
||||
self.create_datasets()
|
||||
if self.region_index == 0:
|
||||
print "scan {0}".format(self.scan_index)
|
||||
|
||||
edelta = 0.0
|
||||
try:
|
||||
ephot = self.region['ephot']
|
||||
Eph.move(ephot)
|
||||
except KeyError:
|
||||
ephot = Eph.take(100)
|
||||
|
||||
if isinstance(ephot, float) and ephot > 0.:
|
||||
try:
|
||||
if self.region['cis']:
|
||||
edelta = ephot - self.ephot_start
|
||||
except AttributeError:
|
||||
self.ephot_start = ephot
|
||||
|
||||
elo = self.region['elo'] + edelta
|
||||
ehi = self.region['ehi'] + edelta
|
||||
|
||||
if self.region['fixed']:
|
||||
Scienta.setAcquisitionMode(ch.psi.pshell.epics.Scienta.AcquisitionMode.Fixed)
|
||||
Scienta.centerEnergy.write(elo)
|
||||
append_dataset(self.channel_center_dataset_name, elo)
|
||||
else:
|
||||
Scienta.setAcquisitionMode(ch.psi.pshell.epics.Scienta.AcquisitionMode.Swept)
|
||||
Scienta.lowEnergy.write(elo)
|
||||
Scienta.highEnergy.write(ehi)
|
||||
Scienta.stepSize.write(self.region['estep'])
|
||||
append_dataset(self.channel_begin_dataset_name, elo)
|
||||
append_dataset(self.channel_end_dataset_name, ehi)
|
||||
append_dataset(self.step_energy_dataset_name, self.region['estep'])
|
||||
|
||||
try:
|
||||
Scienta.setPassEnergy(int(self.region['epass']))
|
||||
append_dataset(self.pass_energy_dataset_name, self.region['epass'])
|
||||
except KeyError:
|
||||
pass
|
||||
|
||||
try:
|
||||
Scienta.stepTime.write(self.region['tstep'])
|
||||
append_dataset(self.step_time_dataset_name, self.region['tstep'])
|
||||
except KeyError:
|
||||
pass
|
||||
|
||||
try:
|
||||
Scienta.setIterations(self.region['iter'])
|
||||
append_dataset(self.iterations_dataset_name, self.region['iter'])
|
||||
except KeyError:
|
||||
pass
|
||||
|
||||
try:
|
||||
ExitSlit.write(self.region['slit'])
|
||||
append_dataset(self.slit_dataset_name, self.region['slit'])
|
||||
except KeyError:
|
||||
pass
|
||||
|
||||
if self.region['position'] == 'sample':
|
||||
move_to_position(SAMPLE_POSITION)
|
||||
|
||||
for name in SAMPLE_POSITION.keys():
|
||||
append_dataset(self.position_dataset_names[name], SAMPLE_POSITION[name])
|
||||
|
||||
|
||||
elif self.region['position'] == 'reference':
|
||||
move_to_position(REFERENCE_POSITION)
|
||||
|
||||
for name in REFERENCE_POSITION.keys():
|
||||
append_dataset(self.position_dataset_names[name], SAMPLE_POSITION[name])
|
||||
|
||||
Scienta.update()
|
||||
|
||||
def read(self):
|
||||
# print("spectrum.read")
|
||||
global current_region_index
|
||||
current_region_index = self.region_index
|
||||
self.setup()
|
||||
print("Acquiring region {0}.".format(self.region['name']))
|
||||
trig_scienta()
|
||||
time.sleep(0.5)
|
||||
sp = Scienta.getSpectrum().read()
|
||||
return sp
|
||||
|
||||
def getSize(self):
|
||||
if self.region['fixed']:
|
||||
nx = 992
|
||||
else:
|
||||
nx = int((self.region['ehi'] - self.region['elo']) / self.region['estep']) + 1
|
||||
return nx
|
||||
|
||||
|
||||
class ImageReader(ReadonlyRegisterBase, ReadonlyRegisterMatrix):
|
||||
def read(self):
|
||||
# print("image.read")
|
||||
return Scienta.getDataMatrix().read()
|
||||
|
||||
def getWidth(self):
|
||||
if self.region['fixed']:
|
||||
nx = 992
|
||||
else:
|
||||
nx = int((self.region['ehi'] - self.region['elo']) / self.region['estep']) + 1
|
||||
return nx
|
||||
|
||||
def getHeight(self):
|
||||
ny = Scienta.slices.read()
|
||||
return ny
|
||||
|
||||
def setup_live_plots(regions):
|
||||
global live_plots
|
||||
global current_region_index
|
||||
names = [region['name'] for region in regions]
|
||||
live_plots = plot(None, names, title="Live Spectra")
|
||||
current_region_index = 0
|
||||
|
||||
def update_live_plots():
|
||||
global live_plots
|
||||
global current_region_index
|
||||
try:
|
||||
while get_context().state.running:
|
||||
y = Scienta.spectrum.take(100)
|
||||
x = Scienta.spectrumX
|
||||
try:
|
||||
series = live_plots[current_region_index].getSeries(0)
|
||||
series.setData(x, y)
|
||||
except IndexError:
|
||||
pass
|
||||
time.sleep(1.0)
|
||||
finally:
|
||||
print "Stopping live spectra"
|
||||
|
||||
def do_scan(scan, motors, positions, regions, latency):
|
||||
global SENSORS
|
||||
|
||||
SENSORS = []
|
||||
|
||||
for (index, region) in enumerate(regions):
|
||||
check_region(region)
|
||||
|
||||
reader = SpectrumReader()
|
||||
reader.region_index = index
|
||||
reader.region_name = "region{0}".format(index + 1)
|
||||
reader.region = region
|
||||
reader.initialize()
|
||||
set_device_alias(reader, reader.region_name + "/ScientaSpectrum")
|
||||
SENSORS.append(reader)
|
||||
|
||||
image = ImageReader()
|
||||
image.region_index = index
|
||||
image.region = region
|
||||
image.initialize()
|
||||
set_device_alias(image, reader.region_name + "/ScientaImage")
|
||||
SENSORS.append(image)
|
||||
|
||||
SENSORS.append(SampleCurrent)
|
||||
SENSORS.append(RefCurrent)
|
||||
adjust_sensors()
|
||||
set_adc_averaging()
|
||||
|
||||
if scan == 'ascan':
|
||||
ascan(motors, SENSORS, positions[0], positions[1], positions[2], latency, False, zigzag = True, before_read=wait_beam, after_read = after_readout)
|
||||
elif scan == 'lscan':
|
||||
lscan(motors, SENSORS, positions[0], positions[1], positions[2], latency, False, before_read=wait_beam, after_read = after_readout)
|
||||
elif scan == 'vscan':
|
||||
vscan(motors, SENSORS, positions, True, latency,False, before_read=wait_beam, after_read = after_readout)
|
||||
else:
|
||||
print('unknown scan mode {}'.format(scan))
|
||||
|
||||
for (index, region) in enumerate(regions):
|
||||
set_attribute(get_exec_pars().scanPath + "region{0}/ScientaSpectrum".format(index + 1), "RegionName", region['name'])
|
||||
set_attribute(get_exec_pars().scanPath + "region{0}/ScientaImage".format(index + 1), "RegionName", region['name'])
|
||||
set_attribute(get_exec_pars().scanPath, "Regions", [region['name'] for region in regions])
|
||||
|
||||
try:
|
||||
setup_live_plots(REGIONS)
|
||||
task = fork(update_live_plots)
|
||||
do_scan(SCAN, MOTORS, POSITIONS, REGIONS, LATENCY)
|
||||
finally:
|
||||
if CLOSE_SHUTTER_AT_END:
|
||||
after_scan()
|
||||
|
||||
@@ -1,316 +0,0 @@
|
||||
"""
|
||||
Discrete scan (vector scan) of multiple spectral regions
|
||||
"""
|
||||
|
||||
# scan positioner: Eph = photon energy
|
||||
#MOTORS = (ManipulatorPhi, ManipulatorTheta)
|
||||
#MOTORS = [ManipulatorPhi]
|
||||
MOTORS = [dummy]
|
||||
# comma-separated discrete list of scan positions
|
||||
#POSITIONS = [(PHI_RA
|
||||
#POSITIONS = [(PNGE[0], THETA_RANGE[0]), (PHI_RANGE[1], THETA_RANGE[1]), STEPS]
|
||||
#POSITIONS = [-175., 180., 5.]
|
||||
# seconds to wait between positioning command and triggering the detector
|
||||
LATENCY = 0.0
|
||||
|
||||
# region setup
|
||||
#
|
||||
# for each region, define a python dictionary with the following items.
|
||||
# optional items can be left unspecified and will default to the indicated values.
|
||||
# for swept mode, include 'elo', 'ehi', 'estep', 'iter' values, but do not include 'efix'.
|
||||
# for fixed mode, include 'efix' value, but do not include 'elo', 'ehi', 'estep', 'iter'.
|
||||
#
|
||||
# 'name': user-specific name of the region (for graph title and RegionName attribute in data file)
|
||||
# 'elo': lower kinetic energy boundary of the spectrum
|
||||
# 'ehi': upper kinetic energy boundary of the spectrum
|
||||
# 'estep': energy step size
|
||||
# 'efix': center kinetic energy in fixed mode
|
||||
# 'epass': pass energy
|
||||
# 'tstep': dwell time in seconds
|
||||
# 'iter': number of iterations/sweeps (default 1)
|
||||
# 'cis': True = constant initial state (photoemission line), False = constant final state (Auger peak), (default False)
|
||||
# 'slit': exit slit (default current value)
|
||||
|
||||
#REGION1 = {'name': 'VB62eV', 'ephot': 62, 'efix': 1222.1, 'epass': 200., 'tstep': 20., 'iter': 1, 'cis': False}
|
||||
#REGION2 = {'name': 'off-resonance', 'ephot': 1235.0, 'efix': 1219.4, 'epass': 200., 'tstep': 20., 'iter': 1, 'cis': False}
|
||||
#REGION1 = {'name': 'VB62eV', 'ephot': 62, 'elo': 49.0, 'ehi': 58.0, 'estep': 0.002, 'epass': 10, 'tstep': 0.5, 'iter': 1, 'cis': False}
|
||||
#REGION1 = {'name': 'VB62eVzoom', 'elo': 54.0, 'ehi': 58.0, 'estep': 0.002, 'epass': 10.0, 'tstep': 0.5, 'iter': 1, 'cis': True}
|
||||
|
||||
# close beam shutter and turn off analyser at the end of the scan
|
||||
CLOSE_SHUTTER_AT_END = False
|
||||
|
||||
|
||||
# --- DO NOT EDIT BELOW THIS LINE! ---
|
||||
|
||||
set_exec_pars(keep=False)
|
||||
|
||||
def check_region(region):
|
||||
"""
|
||||
check region dictionary items and apply defaults where necessary
|
||||
"""
|
||||
region['fixed'] = 'efix' in region
|
||||
if region['fixed']:
|
||||
region['elo'] = region['efix']
|
||||
region['ehi'] = region['efix']
|
||||
if 'iter' not in region:
|
||||
region['iter'] = 1
|
||||
print("region {0}: setting default iter = {1}".format(region['name'], region['iter']))
|
||||
if 'cis' not in region:
|
||||
region['cis'] = False
|
||||
print("region {0}: setting default cis = {1}".format(region['name'], region['cis']))
|
||||
if 'slit' not in region:
|
||||
region['slit'] = ExitSlit.read()
|
||||
print("region {0}: setting default slit = {1}".format(region['name'], region['slit']))
|
||||
|
||||
class SpectrumReader(ReadonlyRegisterBase, ReadonlyRegisterArray):
|
||||
def initialize(self):
|
||||
#super(SpectrumReader, self).initialize()
|
||||
self.scan_index = -1
|
||||
|
||||
def create_datasets(self):
|
||||
path = get_exec_pars().scanPath + self.region_name + "/"
|
||||
|
||||
self.channel_begin_dataset_name = path + "ScientaChannelBegin"
|
||||
self.channel_end_dataset_name = path + "ScientaChannelEnd"
|
||||
self.channel_center_dataset_name = path + "ScientaChannelCenter"
|
||||
self.pass_energy_dataset_name = path + "ScientaPassEnergy"
|
||||
self.step_energy_dataset_name = path + "ScientaStepEnergy"
|
||||
self.step_time_dataset_name = path + "ScientaStepTime"
|
||||
self.iterations_dataset_name = path + "ScientaIterations"
|
||||
self.slit_dataset_name = path + "ExitSlit"
|
||||
|
||||
create_dataset(self.channel_begin_dataset_name, 'd')
|
||||
create_dataset(self.channel_end_dataset_name, 'd')
|
||||
create_dataset(self.channel_center_dataset_name, 'd')
|
||||
create_dataset(self.pass_energy_dataset_name, 'd')
|
||||
create_dataset(self.step_energy_dataset_name, 'd')
|
||||
create_dataset(self.step_time_dataset_name, 'd')
|
||||
create_dataset(self.iterations_dataset_name, 'd')
|
||||
create_dataset(self.slit_dataset_name, 'd')
|
||||
|
||||
def setup(self):
|
||||
if self.scan_index != get_exec_pars().index:
|
||||
self.scan_index = get_exec_pars().index
|
||||
self.create_datasets()
|
||||
if self.region_index == 0:
|
||||
print "scan {0}".format(self.scan_index)
|
||||
|
||||
#ephot = Eph.read()
|
||||
#try:
|
||||
# if self.region['cis']:
|
||||
# edelta = ephot - self.ephot_start
|
||||
# else:
|
||||
# edelta = 0.0
|
||||
#except AttributeError:
|
||||
# self.ephot_start = ephot
|
||||
edelta = 0.0
|
||||
|
||||
elo = self.region['elo'] + edelta
|
||||
ehi = self.region['ehi'] + edelta
|
||||
|
||||
try:
|
||||
Eph.write(self.region['ephot'])
|
||||
except KeyError:
|
||||
pass
|
||||
|
||||
if self.region['fixed']:
|
||||
Scienta.setAcquisitionMode(ch.psi.pshell.epics.Scienta.AcquisitionMode.Fixed)
|
||||
Scienta.centerEnergy.write(elo)
|
||||
else:
|
||||
Scienta.setAcquisitionMode(ch.psi.pshell.epics.Scienta.AcquisitionMode.Swept)
|
||||
Scienta.lowEnergy.write(elo)
|
||||
Scienta.highEnergy.write(ehi)
|
||||
Scienta.stepSize.write(self.region['estep'])
|
||||
|
||||
Scienta.setPassEnergy(int(self.region['epass']))
|
||||
Scienta.stepTime.write(self.region['tstep'])
|
||||
Scienta.setIterations(self.region['iter'])
|
||||
ExitSlit.write(self.region['slit'])
|
||||
Scienta.update()
|
||||
|
||||
if self.region['fixed']:
|
||||
append_dataset(self.channel_center_dataset_name, elo)
|
||||
else:
|
||||
append_dataset(self.channel_begin_dataset_name, elo)
|
||||
append_dataset(self.channel_end_dataset_name, ehi)
|
||||
append_dataset(self.step_energy_dataset_name, self.region['estep'])
|
||||
|
||||
append_dataset(self.pass_energy_dataset_name, self.region['epass'])
|
||||
append_dataset(self.step_time_dataset_name, self.region['tstep'])
|
||||
append_dataset(self.iterations_dataset_name, self.region['iter'])
|
||||
append_dataset(self.slit_dataset_name, self.region['slit'])
|
||||
|
||||
def read(self):
|
||||
global current_region_index
|
||||
current_region_index = self.region_index
|
||||
self.setup()
|
||||
print("Acquiring region {0}.".format(self.region['name']))
|
||||
trig_scienta()
|
||||
time.sleep(0.5)
|
||||
sp = Scienta.getSpectrum().read()
|
||||
return sp
|
||||
|
||||
def getSize(self):
|
||||
if self.region['fixed']:
|
||||
nx = 992
|
||||
else:
|
||||
nx = int((self.region['ehi'] - self.region['elo']) / self.region['estep']) + 1
|
||||
return nx
|
||||
|
||||
|
||||
class ImageReader(ReadonlyRegisterBase, ReadonlyRegisterMatrix):
|
||||
def read(self):
|
||||
return Scienta.getDataMatrix().read()
|
||||
|
||||
def getWidth(self):
|
||||
if self.region['fixed']:
|
||||
nx = 992
|
||||
else:
|
||||
nx = int((self.region['ehi'] - self.region['elo']) / self.region['estep']) + 1
|
||||
return nx
|
||||
|
||||
def getHeight(self):
|
||||
ny = Scienta.slices.read()
|
||||
return ny
|
||||
|
||||
def setup_live_plots(regions):
|
||||
global live_plots
|
||||
global current_region_index
|
||||
names = [region['name'] for region in regions]
|
||||
live_plots = plot(None, names, title="Live Spectra")
|
||||
current_region_index = 0
|
||||
|
||||
def update_live_plots():
|
||||
global live_plots
|
||||
global current_region_index
|
||||
try:
|
||||
while get_context().state.running:
|
||||
y = Scienta.spectrum.take(100)
|
||||
x = Scienta.spectrumX
|
||||
try:
|
||||
series = live_plots[current_region_index].getSeries(0)
|
||||
series.setData(x, y)
|
||||
except IndexError:
|
||||
pass
|
||||
time.sleep(1.0)
|
||||
finally:
|
||||
print "Stopping live spectra"
|
||||
|
||||
def do_scan(motors, positions, regions, latency):
|
||||
global SENSORS
|
||||
|
||||
SENSORS = []
|
||||
|
||||
|
||||
for (index, region) in enumerate(regions):
|
||||
|
||||
check_region(region)
|
||||
|
||||
|
||||
reader = SpectrumReader()
|
||||
reader.region_index = index
|
||||
reader.region_name = "region{0}".format(index + 1)
|
||||
reader.region = region
|
||||
reader.initialize()
|
||||
set_device_alias(reader, reader.region_name + "/ScientaSpectrum")
|
||||
SENSORS.append(reader)
|
||||
|
||||
image = ImageReader()
|
||||
image.region_index = index
|
||||
image.region = region
|
||||
image.initialize()
|
||||
set_device_alias(image, reader.region_name + "/ScientaImage")
|
||||
SENSORS.append(image)
|
||||
|
||||
|
||||
SENSORS.append(SampleCurrent)
|
||||
SENSORS.append(RefCurrent)
|
||||
adjust_sensors()
|
||||
set_adc_averaging()
|
||||
|
||||
#ascan(motors, SENSORS, positions[0], positions[1], positions[2], latency, False, zigzag = True, before_read=wait_beam, after_read = after_readout)
|
||||
#lscan(motors, SENSORS, positions[0], positions[1], positions[2], latency, False, before_read=wait_beam, after_read = after_readout)
|
||||
vscan(motors, SENSORS, positions, True, latency,False, before_read=wait_beam, after_read = after_readout)
|
||||
|
||||
|
||||
for (index, region) in enumerate(regions):
|
||||
set_attribute(get_exec_pars().scanPath + "region{0}/ScientaSpectrum".format(index + 1), "RegionName", region['name'])
|
||||
set_attribute(get_exec_pars().scanPath + "region{0}/ScientaImage".format(index + 1), "RegionName", region['name'])
|
||||
set_attribute(get_exec_pars().scanPath, "Regions", [region['name'] for region in regions])
|
||||
|
||||
|
||||
|
||||
class PhysicalLocation():
|
||||
def __init__(self, X, Y, Z, theta, tilt, phi):
|
||||
self.X = X
|
||||
self.Y = Y
|
||||
self.Z = Z
|
||||
self.theta = theta
|
||||
self.tilt = tilt
|
||||
self.phi = phi
|
||||
|
||||
def move_to_location(self):
|
||||
ManipulatorX.move(self.X)
|
||||
ManipulatorY.move(self.Y)
|
||||
ManipulatorZ.move(self.Z)
|
||||
ManipulatorTheta.move(self.theta)
|
||||
ManipulatorTilt.move(self.tilt)
|
||||
ManipulatorPhi.move(self.phi)
|
||||
|
||||
#VARS
|
||||
sample = PhysicalLocation(-4.1,-0.5,115.1,-8.8,0.7,-90.0)
|
||||
goldReference = PhysicalLocation(-3.4,4.4,111.6,-8.8,0.7,90.0)
|
||||
dosing = PhysicalLocation(-4.1,-0.5,115.1,51.0,0.7,-90.0)
|
||||
|
||||
sample.move_to_location()
|
||||
|
||||
energies = [300,400,500]
|
||||
|
||||
for e in energies:
|
||||
try:
|
||||
Eph.move(e)
|
||||
|
||||
goldReference.move_to_location()
|
||||
|
||||
goldRegions = goldRegion(e, "fixed")
|
||||
|
||||
do_scan(MOTORS, POSITIONS, goldRegions, LATENCY)
|
||||
|
||||
sample.move_to_location()
|
||||
|
||||
sampleRegions =
|
||||
|
||||
do_scan(MOTORS, POSITIONS, sampleRegions, LATENCY)
|
||||
|
||||
def goldRegion(energy, scan_type):
|
||||
if scan_type == "fixed":
|
||||
return [{'name': 'Au', 'ephot': 1237.7, 'efix': 1222.1, 'epass': 50., 'tstep': 5., 'iter': 1, 'cis': False}]
|
||||
elif scan_type == "swept":
|
||||
return [{'name': 'Au', 'elo': 54.0, 'ehi': 58.0, 'estep': 0.002, 'epass': 10.0, 'tstep': 0.5, 'iter': 1, 'cis': False}]
|
||||
|
||||
def sampleRegion(energy, scan_type):
|
||||
epass = 10.0
|
||||
tstep = 0.5
|
||||
estep = 0.002
|
||||
if scan_type == "In4d":
|
||||
e1 = energy - 4.5 - 18
|
||||
e2 = energy - 4.5 - 17
|
||||
return [{'name': scan_type, 'elo': 54.0, 'ehi': 58.0, 'estep': estep, 'epass': epass, 'tstep': tstep, 'iter': 1, 'cis': False}]
|
||||
|
||||
elif scan_type == "Sb4d":
|
||||
e1 = energy - 4.5 - 33
|
||||
e2 = energy - 4.5 - 32
|
||||
|
||||
elif scan_type == "In3d":
|
||||
e1 = energy - 4.5 - 451
|
||||
e2 = energy - 4.5 - 444
|
||||
return [{'name': scan_type, 'elo': 54.0, 'ehi': 58.0, 'estep': estep, 'epass': epass, 'tstep': tstep, 'iter': 1, 'cis': False}]
|
||||
|
||||
|
||||
|
||||
goldReference.move_to_location()
|
||||
thisregion =
|
||||
|
||||
|
||||
sample.move_to_location()
|
||||
thisregion = {'name': 'In3d', 'ephot': 1237.7, 'efix': 1222.1, 'epass': 50., 'tstep': 5., 'iter': 1, 'cis': False}
|
||||
@@ -1,88 +0,0 @@
|
||||
|
||||
|
||||
import ch.psi.pshell.plot.RangeSelectionPlot.RangeSelection as RangeSelection
|
||||
|
||||
REFERENCE_POSITION = {'X':1.4 ,'Y':0.0, 'Z':110.6, 'Theta':-9.1, 'Tilt':0.8, 'Phi':-90.0}
|
||||
SAMPLE_POSITION = {'X':1.4 ,'Y':0.6, 'Z':116.5, 'Theta':-9.1, 'Tilt':0.8, 'Phi':-90.0}
|
||||
|
||||
def move_to_position(pdict):
|
||||
ManipulatorX.move(pdict['X'])
|
||||
ManipulatorY.move(pdict['Y'])
|
||||
ManipulatorZ.move(pdict['Z'])
|
||||
ManipulatorTheta.move(pdict['Theta'])
|
||||
ManipulatorTilt.move(pdict['Tilt'])
|
||||
ManipulatorPhi.move(pdict['Phi'])
|
||||
|
||||
|
||||
binding_center_Au_Ef=0.;
|
||||
window_Au_Ef=4.;
|
||||
time_Au_Ef = 15.
|
||||
|
||||
binding_center_Au_4f=86.;
|
||||
window_Au_4f=15.;
|
||||
time_Au_4f = 2.
|
||||
|
||||
binding_center_As_3d=43.;
|
||||
window_As_3d=15.;
|
||||
time_As_3d=50.
|
||||
|
||||
energies = [1450,950,450]
|
||||
|
||||
exit_slit_dict = {1450:50, 950:25, 450:25}
|
||||
pass_energy_dict = {1450:50, 950:20, 450:20}
|
||||
|
||||
for e in energies:
|
||||
|
||||
photon_energy = float(e)
|
||||
ExitSlit.write(exit_slit_dict[e])
|
||||
|
||||
#####################################################
|
||||
#Au-fermi
|
||||
set_exec_pars(name="Au-Fermi-"+str(e)+"eV")
|
||||
move_to_position(REFERENCE_POSITION)
|
||||
|
||||
center_Au = photon_energy - 4.5 - binding_center_Au_Ef
|
||||
rs = RangeSelection(center_Au-window_Au_Ef/2.,center_Au+window_Au_Ef/2.)
|
||||
rs.setVars([time_Au_Ef, 0.05, 1, photon_energy]) #Time, Size, Iteration, photon energy
|
||||
|
||||
|
||||
|
||||
run("XPSSpectrum", {"save_scienta_image":True,
|
||||
"ranges":[rs, ],
|
||||
"ENDSCAN":False,
|
||||
"pass_energy":pass_energy_dict[e]})
|
||||
|
||||
set_exec_pars(open=False)
|
||||
|
||||
#####################################################
|
||||
#Au-4f
|
||||
set_exec_pars(name="Au-4f-"+str(e)+"eV")
|
||||
center_Au_4f = photon_energy - 4.5 - binding_center_Au_4f
|
||||
rs = RangeSelection(center_Au_4f-window_Au_4f/2.,center_Au_4f+window_Au_4f/2.)
|
||||
rs.setVars([time_Au_4f, 0.05, 1, photon_energy]) #Time, Size, Iteration, photon energy
|
||||
|
||||
|
||||
run("XPSSpectrum", {"save_scienta_image":True,
|
||||
"ranges":[rs, ],
|
||||
"ENDSCAN":False,
|
||||
"pass_energy":pass_energy_dict[e]})
|
||||
|
||||
set_exec_pars(open=False)
|
||||
|
||||
#####################################################
|
||||
#As
|
||||
set_exec_pars(name="As-3d-"+str(e)+"eV")
|
||||
move_to_position(SAMPLE_POSITION)
|
||||
center_As_3d = photon_energy - 4.5 - binding_center_As_3d
|
||||
rs = RangeSelection(center_As_3d-window_As_3d/2.,center_As_3d+window_As_3d/2.)
|
||||
|
||||
rs.setVars([time_As_3d, 0.05, 1, photon_energy]) #Time, Size, Iteration, photon energy
|
||||
|
||||
run("XPSSpectrum", {"save_scienta_image":True,
|
||||
"ranges":[rs, ],
|
||||
"ENDSCAN":False,
|
||||
"pass_energy":pass_energy_dict[e]})
|
||||
|
||||
set_exec_pars(open=False)
|
||||
|
||||
|
||||
@@ -1,84 +0,0 @@
|
||||
|
||||
|
||||
import ch.psi.pshell.plot.RangeSelectionPlot.RangeSelection as RangeSelection
|
||||
|
||||
REFERENCE_POSITION = {'X':1.4 ,'Y':0.0, 'Z':110.6, 'Theta':-9.1, 'Tilt':0.8, 'Phi':-90.0}
|
||||
SAMPLE_POSITION = {'X':1.4 ,'Y':0.6, 'Z':116.5, 'Theta':-9.1, 'Tilt':0.8, 'Phi':-90.0}
|
||||
|
||||
def move_to_position(pdict):
|
||||
ManipulatorX.move(pdict['X'])
|
||||
ManipulatorY.move(pdict['Y'])
|
||||
ManipulatorZ.move(pdict['Z'])
|
||||
ManipulatorTheta.move(pdict['Theta'])
|
||||
ManipulatorTilt.move(pdict['Tilt'])
|
||||
ManipulatorPhi.move(pdict['Phi'])
|
||||
|
||||
|
||||
binding_center_Au_Ef=0.;
|
||||
window_Au_Ef=4.;
|
||||
time_Au_Ef = 0.01
|
||||
|
||||
binding_center_Au_4f=86.;
|
||||
window_Au_4f=15.;
|
||||
time_Au_4f = 0.01
|
||||
|
||||
binding_center_As_3d=43.;
|
||||
window_As_3d=15.;
|
||||
time_As_3d=0.01
|
||||
|
||||
energies = [1450,950,450]
|
||||
|
||||
for e in energies:
|
||||
|
||||
photon_energy = float(e)
|
||||
|
||||
#####################################################
|
||||
#Au-fermi
|
||||
set_exec_pars(name="Au-Fermi-"+str(e)+"eV")
|
||||
move_to_position(REFERENCE_POSITION)
|
||||
|
||||
center_Au = photon_energy - 4.5 - binding_center_Au_Ef
|
||||
rs = RangeSelection(center_Au-window_Au_Ef/2.,center_Au+window_Au_Ef/2.)
|
||||
rs.setVars([time_Au_Ef, 0.05, 1, photon_energy]) #Time, Size, Iteration, photon energy
|
||||
|
||||
|
||||
|
||||
run("XPSSpectrum", {"save_scienta_image":True,
|
||||
"ranges":[rs, ],
|
||||
"ENDSCAN":False,
|
||||
"pass_energy":50})
|
||||
|
||||
set_exec_pars(open=False)
|
||||
|
||||
#####################################################
|
||||
#Au-4f
|
||||
set_exec_pars(name="Au-4f-"+str(e)+"eV")
|
||||
center_Au_4f = photon_energy - 4.5 - binding_center_Au_4f
|
||||
rs = RangeSelection(center_Au_4f-window_Au_4f/2.,center_Au_4f+window_Au_4f/2.)
|
||||
rs.setVars([time_Au_4f, 0.05, 1, photon_energy]) #Time, Size, Iteration, photon energy
|
||||
|
||||
|
||||
run("XPSSpectrum", {"save_scienta_image":True,
|
||||
"ranges":[rs, ],
|
||||
"ENDSCAN":False,
|
||||
"pass_energy":50})
|
||||
|
||||
set_exec_pars(open=False)
|
||||
|
||||
#####################################################
|
||||
#As
|
||||
set_exec_pars(name="As-3d-"+str(e)+"eV")
|
||||
move_to_position(SAMPLE_POSITION)
|
||||
center_As_3d = photon_energy - 4.5 - binding_center_As_3d
|
||||
rs = RangeSelection(center_As_3d-window_As_3d/2.,center_As_3d+window_As_3d/2.)
|
||||
|
||||
rs.setVars([time_As_3d, 0.05, 1, photon_energy]) #Time, Size, Iteration, photon energy
|
||||
|
||||
run("XPSSpectrum", {"save_scienta_image":True,
|
||||
"ranges":[rs, ],
|
||||
"ENDSCAN":False,
|
||||
"pass_energy":50})
|
||||
|
||||
set_exec_pars(open=False)
|
||||
|
||||
|
||||
@@ -1,88 +0,0 @@
|
||||
|
||||
|
||||
import ch.psi.pshell.plot.RangeSelectionPlot.RangeSelection as RangeSelection
|
||||
|
||||
REFERENCE_POSITION = {'X':1.4 ,'Y':0.0, 'Z':110.6, 'Theta':-9.1, 'Tilt':0.8, 'Phi':-90.0}
|
||||
SAMPLE_POSITION = {'X':1.4 ,'Y':0.6, 'Z':116.5, 'Theta':-9.1, 'Tilt':0.8, 'Phi':-90.0}
|
||||
|
||||
def move_to_position(pdict):
|
||||
ManipulatorX.move(pdict['X'])
|
||||
ManipulatorY.move(pdict['Y'])
|
||||
ManipulatorZ.move(pdict['Z'])
|
||||
ManipulatorTheta.move(pdict['Theta'])
|
||||
ManipulatorTilt.move(pdict['Tilt'])
|
||||
ManipulatorPhi.move(pdict['Phi'])
|
||||
|
||||
|
||||
binding_center_Au_Ef=0.;
|
||||
window_Au_Ef=4.;
|
||||
time_Au_Ef = 15.
|
||||
|
||||
binding_center_Au_4f=86.;
|
||||
window_Au_4f=15.;
|
||||
time_Au_4f = 2.
|
||||
|
||||
binding_center_As_3d=43.;
|
||||
window_As_3d=15.;
|
||||
time_As_3d=50.
|
||||
|
||||
energies = [1450,950,450]
|
||||
|
||||
exit_slit_dict = {1450:50, 950:25, 450:25}
|
||||
pass_energy_dict = {1450:50, 950:20, 450:20}
|
||||
|
||||
for e in energies:
|
||||
|
||||
photon_energy = float(e)
|
||||
ExitSlit.write(exit_slit_dict[e])
|
||||
|
||||
#####################################################
|
||||
#Au-fermi
|
||||
set_exec_pars(name="Au-Fermi-"+str(e)+"eV")
|
||||
move_to_position(REFERENCE_POSITION)
|
||||
|
||||
center_Au = photon_energy - 4.5 - binding_center_Au_Ef
|
||||
rs = RangeSelection(center_Au-window_Au_Ef/2.,center_Au+window_Au_Ef/2.)
|
||||
rs.setVars([time_Au_Ef, 0.05, 1, photon_energy]) #Time, Size, Iteration, photon energy
|
||||
|
||||
|
||||
|
||||
run("XPSSpectrum", {"save_scienta_image":True,
|
||||
"ranges":[rs, ],
|
||||
"ENDSCAN":False,
|
||||
"pass_energy":pass_energy_dict[e]})
|
||||
|
||||
set_exec_pars(open=False)
|
||||
|
||||
#####################################################
|
||||
#Au-4f
|
||||
set_exec_pars(name="Au-4f-"+str(e)+"eV")
|
||||
center_Au_4f = photon_energy - 4.5 - binding_center_Au_4f
|
||||
rs = RangeSelection(center_Au_4f-window_Au_4f/2.,center_Au_4f+window_Au_4f/2.)
|
||||
rs.setVars([time_Au_4f, 0.05, 1, photon_energy]) #Time, Size, Iteration, photon energy
|
||||
|
||||
|
||||
run("XPSSpectrum", {"save_scienta_image":True,
|
||||
"ranges":[rs, ],
|
||||
"ENDSCAN":False,
|
||||
"pass_energy":pass_energy_dict[e]})
|
||||
|
||||
set_exec_pars(open=False)
|
||||
|
||||
#####################################################
|
||||
#As
|
||||
set_exec_pars(name="As-3d-"+str(e)+"eV")
|
||||
move_to_position(SAMPLE_POSITION)
|
||||
center_As_3d = photon_energy - 4.5 - binding_center_As_3d
|
||||
rs = RangeSelection(center_As_3d-window_As_3d/2.,center_As_3d+window_As_3d/2.)
|
||||
|
||||
rs.setVars([time_As_3d, 0.05, 1, photon_energy]) #Time, Size, Iteration, photon energy
|
||||
|
||||
run("XPSSpectrum", {"save_scienta_image":True,
|
||||
"ranges":[rs, ],
|
||||
"ENDSCAN":False,
|
||||
"pass_energy":pass_energy_dict[e]})
|
||||
|
||||
set_exec_pars(open=False)
|
||||
|
||||
|
||||
Reference in New Issue
Block a user